BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_P11
(288 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 24 1.3
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 22 5.2
AY524130-1|AAS17758.1| 211|Anopheles gambiae superoxide dismuta... 22 5.2
AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant r... 22 5.2
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 21 6.9
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 21 6.9
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 21 9.1
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 197 IIFTII*NLKCKMFTLLFIKINVMLL 120
I+F I+ N K M +LFI N++ +
Sbjct: 1615 IVFEIVTNKKFDMIIMLFIGFNMLTM 1640
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +2
Query: 50 FRNDENKIRKAFSLINGNKTWKDLV 124
FR NK+R+ + L+N + ++V
Sbjct: 1498 FRGANNKLRELYKLLNSDTHQDEVV 1522
>AY524130-1|AAS17758.1| 211|Anopheles gambiae superoxide dismutase
2 protein.
Length = 211
Score = 21.8 bits (44), Expect = 5.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 149 LFIKINVMLLNPSKFYFR*SEK 84
+FI INV+ L P K F EK
Sbjct: 48 VFIDINVVGLTPGKHGFHIHEK 69
>AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant
receptor Or3 protein.
Length = 411
Score = 21.8 bits (44), Expect = 5.2
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 133 LIFINKRVNILHLRFYIMV 189
L F+N R ++ H FY+ +
Sbjct: 191 LYFLNIRTSMAHYTFYVAI 209
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 46 HIFNSIPLYIMDSI 5
H + PLY+MD I
Sbjct: 1204 HYYKPSPLYVMDEI 1217
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 177 LYYGKNNIFTIMLHLF 224
LY N ++TI LH F
Sbjct: 429 LYLDHNQLYTIELHAF 444
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 153 GEHFTFEILYYGKNNIFTIMLHLF 224
G+ E+L NNI+++ HLF
Sbjct: 168 GQTRNLEVLDLSTNNIWSLPDHLF 191
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 280,631
Number of Sequences: 2352
Number of extensions: 5084
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 17384760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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