Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_P11
         (288 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002879-1|AAH02879.2|  964|Homo sapiens PARC protein protein.         28   6.3  
AY145132-1|AAN61516.1| 2517|Homo sapiens p53-associated parkin-l...    28   6.3  
AL133375-1|CAI20204.1| 2518|Homo sapiens RP3-330M21.2 protein.         28   6.3  
AJ318215-1|CAC85756.1| 2517|Homo sapiens putative E3 ubiquitin l...    28   6.3  
AB014608-1|BAA31683.3| 1753|Homo sapiens KIAA0708 protein.             28   6.3  

>BC002879-1|AAH02879.2|  964|Homo sapiens PARC protein protein.
          Length = 964

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 205 PLCYIYLPRTCYP 243
           PLCY+Y PR C P
Sbjct: 156 PLCYLYHPRKCLP 168


>AY145132-1|AAN61516.1| 2517|Homo sapiens p53-associated parkin-like
            cytoplasmic protein protein.
          Length = 2517

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 205  PLCYIYLPRTCYP 243
            PLCY+Y PR C P
Sbjct: 1709 PLCYLYHPRKCLP 1721


>AL133375-1|CAI20204.1| 2518|Homo sapiens RP3-330M21.2 protein.
          Length = 2518

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 205  PLCYIYLPRTCYP 243
            PLCY+Y PR C P
Sbjct: 1709 PLCYLYHPRKCLP 1721


>AJ318215-1|CAC85756.1| 2517|Homo sapiens putative E3 ubiquitin ligase
            protein.
          Length = 2517

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 205  PLCYIYLPRTCYP 243
            PLCY+Y PR C P
Sbjct: 1709 PLCYLYHPRKCLP 1721


>AB014608-1|BAA31683.3| 1753|Homo sapiens KIAA0708 protein.
          Length = 1753

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 205 PLCYIYLPRTCYP 243
           PLCY+Y PR C P
Sbjct: 945 PLCYLYHPRKCLP 957


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,740,026
Number of Sequences: 237096
Number of extensions: 675622
Number of successful extensions: 912
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 76,859,062
effective HSP length: 72
effective length of database: 59,788,150
effective search space used: 1375127450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)