Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_P11
(288 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40945-4|AAA81722.2| 318|Caenorhabditis elegans Hypothetical pr... 28 0.93
Z81055-5|CAB02894.1| 278|Caenorhabditis elegans Hypothetical pr... 27 1.6
Z81050-5|CAB02855.2| 367|Caenorhabditis elegans Hypothetical pr... 27 1.6
U40799-5|AAA81483.2| 174|Caenorhabditis elegans Hypothetical pr... 27 1.6
U52072-1|AAD11465.1| 97|Caenorhabditis elegans dauer-upregulat... 27 2.9
U21321-8|AAG00045.1| 296|Caenorhabditis elegans Hypothetical pr... 26 3.8
AL132949-2|CAB61069.1| 286|Caenorhabditis elegans Hypothetical ... 25 6.6
AL132862-23|CAB60559.1| 540|Caenorhabditis elegans Hypothetical... 25 6.6
AL132853-3|CAB60438.1| 859|Caenorhabditis elegans Hypothetical ... 25 6.6
AF045640-1|AAC02572.2| 121|Caenorhabditis elegans Hypothetical ... 25 6.6
U53340-1|AAA96206.1| 658|Caenorhabditis elegans Hypothetical pr... 25 8.7
>U40945-4|AAA81722.2| 318|Caenorhabditis elegans Hypothetical
protein F10D7.4 protein.
Length = 318
Score = 28.3 bits (60), Expect = 0.93
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 9 LSIIYSGIELNMCYLEMMKTKYEKLFL*LTEIKLGRI**HYIDFYK--QKGEHFTFEILY 182
L ++Y G + + L KT E++F +E+ H I F + +K E TFE+
Sbjct: 136 LHLLYHGNDQQVVQLNYSKTGLERIFA--SELT------HDIHFCRAIRKAEIVTFEVTI 187
Query: 183 YGKN 194
YGKN
Sbjct: 188 YGKN 191
>Z81055-5|CAB02894.1| 278|Caenorhabditis elegans Hypothetical
protein F01G10.6 protein.
Length = 278
Score = 27.5 bits (58), Expect = 1.6
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 163 LHLRFYIMVKIIFLPLCYIYLPRTCY 240
+ ++ ++++ +FLPL Y R CY
Sbjct: 1 MEMQHFLLILTVFLPLTYCQTTRNCY 26
>Z81050-5|CAB02855.2| 367|Caenorhabditis elegans Hypothetical
protein C50B6.6 protein.
Length = 367
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 121 SSITLIFINKRVNILHLRFYIMVKIIFLPLCYIYLPRTCYPK 246
S+I+ +NK+V + F+ ++ II C+ LPR C+PK
Sbjct: 131 STISDDTLNKKVLNYIVMFFWVIVIIIPVFCFATLPR-CHPK 171
>U40799-5|AAA81483.2| 174|Caenorhabditis elegans Hypothetical
protein F42C5.6 protein.
Length = 174
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 166 HLRFYIMVKIIFLPLCYIYLPRTCY 240
HLR +I++ II LP+C + LP + +
Sbjct: 106 HLRVWIVIMIIVLPICLV-LPASTF 129
>U52072-1|AAD11465.1| 97|Caenorhabditis elegans dauer-upregulated
protein 191 protein.
Length = 97
Score = 26.6 bits (56), Expect = 2.9
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = +1
Query: 178 YIMVKIIFLPLCYIYLPRTCYP 243
++++ + F C+++LP+T YP
Sbjct: 59 FVILFVFFSSPCFLFLPKTVYP 80
>U21321-8|AAG00045.1| 296|Caenorhabditis elegans Hypothetical
protein ZK177.2 protein.
Length = 296
Score = 26.2 bits (55), Expect = 3.8
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +2
Query: 53 RNDENKIRKAFSLINGNKTWKDL 121
+ D+ K+R+A ++ K WK+L
Sbjct: 259 KRDKKKVRQAVKMVGAAKNWKNL 281
>AL132949-2|CAB61069.1| 286|Caenorhabditis elegans Hypothetical
protein Y53F4B.2 protein.
Length = 286
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 81 AFRILFSSFLNNTYSIQ 31
+F +LFSSF NN Y ++
Sbjct: 260 SFLVLFSSFFNNAYLVK 276
>AL132862-23|CAB60559.1| 540|Caenorhabditis elegans Hypothetical
protein Y73F8A.30 protein.
Length = 540
Score = 25.4 bits (53), Expect = 6.6
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = -1
Query: 267 IYNSVLYFRVTSSRQINVT*W*KYYFYHNIKSQM*NVHPFVYKNQCNATKSFQVLFPLIR 88
+YNSV+ R + R INV Y+ +++ ++P +Y+ C F FP
Sbjct: 88 LYNSVVMNREETERYINVVVT-TNYWKGETGAEVKFMYPALYRTSCLLDIRF---FP-YD 142
Query: 87 EKAFRILFSSFLNNTYSIQY 28
++A ++ SS+ ++ I Y
Sbjct: 143 QQACKLTISSWTSSKSDINY 162
>AL132853-3|CAB60438.1| 859|Caenorhabditis elegans Hypothetical
protein Y80D3A.7 protein.
Length = 859
Score = 25.4 bits (53), Expect = 6.6
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 135 QCNATKSFQVLFPLIREKAFRILFSSFLNNTYSIQYH 25
+ N+T SF++ +P +IL + NN Y ++ H
Sbjct: 114 ESNSTDSFEITYPTTELLGHKILLA---NNLYGVETH 147
>AF045640-1|AAC02572.2| 121|Caenorhabditis elegans Hypothetical
protein C11D2.3 protein.
Length = 121
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 141 KNQCNATKSFQVLFPLIREKAFRI 70
K QC SFQVL EKAF++
Sbjct: 30 KYQCALDNSFQVLVDDFSEKAFKL 53
>U53340-1|AAA96206.1| 658|Caenorhabditis elegans Hypothetical
protein F02E8.4 protein.
Length = 658
Score = 25.0 bits (52), Expect = 8.7
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -1
Query: 153 PFVYKNQC--NATKSFQVLFPLIREKAFRILFSSFLNNTYSIQYHCI 19
PFV+ NQC ++ K+F LFP+ R+ + + N +S+ + C+
Sbjct: 261 PFVHANQCSTSSAKNFD-LFPVDP----RMKIDARIINNHSVDFGCL 302
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,343,440
Number of Sequences: 27780
Number of extensions: 118223
Number of successful extensions: 266
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 269889950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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