Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_P09
         (197 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   0.22 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   2.7  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      18   8.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    18   8.4  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 0.22
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +3

Query: 81  MSGGLDLLALSEED---VTKMLAATTHLGAENVNFQMETY 191
           MSGG+  +A    D   +T  LAA+ HL +   +   +TY
Sbjct: 201 MSGGMHQMANYSTDYSSLTHSLAASNHLLSSGQHLLQDTY 240


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 137 KHLSHIFLAERKQV 96
           KH+ +I L  RKQV
Sbjct: 275 KHIDNISLRARKQV 288


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 67 LQTQRCRE 90
          L TQRC+E
Sbjct: 9  LMTQRCKE 16


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +3

Query: 45  YTRLVVTLTNATMS 86
           Y RL++ + N+T++
Sbjct: 93  YPRLIIGIMNSTLN 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,434
Number of Sequences: 336
Number of extensions: 763
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 44
effective length of database: 107,801
effective search space used:  2263821
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)