Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_P09
         (197 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   1.1  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   1.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   1.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   1.4  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    19   5.7  
S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               19   5.7  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 1.1
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -3

Query: 45  NATLVPNSC 19
           NAT++PNSC
Sbjct: 91  NATVLPNSC 99


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
          beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 1.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 92 SSRHRCVCKSYD*TRIMP 39
          +S H C  K+ D T+IMP
Sbjct: 20 NSPHTCRTKNGDYTKIMP 37


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 1.1
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -3

Query: 45  NATLVPNSC 19
           NAT++PNSC
Sbjct: 91  NATVLPNSC 99


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 185 LHLEINIFRSQMGGRRKHLSHI 120
           LHLE N  R   G   + LSH+
Sbjct: 847 LHLEDNRIRELKGFEFERLSHL 868


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 19.0 bits (37), Expect = 5.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 45  YTRLVVTLTNATMSGGLDLLALS 113
           YT+L V   + T+  G+  +ALS
Sbjct: 240 YTKLTVAGESFTVKNGIYGIALS 262


>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 19.0 bits (37), Expect = 5.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 65 SYD*TRIMPPSCRIP 21
          SY  T +MP +C+ P
Sbjct: 19 SYFVTPVMPCNCKAP 33


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,011
Number of Sequences: 438
Number of extensions: 1016
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used:  2668491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)