Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_P07
(326 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF022976-11|AAC69080.1| 196|Caenorhabditis elegans Serpentine r... 29 0.60
Z46996-7|CAE17681.1| 152|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z67755-5|CAA91758.2| 966|Caenorhabditis elegans Hypothetical pr... 26 5.6
AF200199-1|AAF13716.1| 966|Caenorhabditis elegans MES-1 protein. 26 5.6
L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain pro... 26 7.4
Z81571-6|CAB04616.1| 460|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical pr... 25 9.7
U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family... 25 9.7
U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical pr... 25 9.7
>AF022976-11|AAC69080.1| 196|Caenorhabditis elegans Serpentine
receptor, class w protein108 protein.
Length = 196
Score = 29.5 bits (63), Expect = 0.60
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +3
Query: 3 LLLITSLLAIHSTVQRTRRASKSLICSLRMSSYTTKASTFLTNSTF 140
++++ ++L +H+ + + ++A K SLR + +TTK F+T + F
Sbjct: 58 VIIVLTILLLHA-LNKAKKARKKKKSSLRDTDHTTKLVVFMTAAFF 102
>Z46996-7|CAE17681.1| 152|Caenorhabditis elegans Hypothetical
protein C34C12.9 protein.
Length = 152
Score = 27.5 bits (58), Expect = 2.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 57 RASKSLICSLRMSSYTTKASTFLTNSTFPLTFLKPMMFLNNKRC 188
R+S SLR T ST T S+ P + + P MF N+++C
Sbjct: 77 RSSTGFYSSLRNLFSTGNPSTTTTISSIPESHINP-MFANHEKC 119
>Z67755-5|CAA91758.2| 966|Caenorhabditis elegans Hypothetical
protein F54F7.5 protein.
Length = 966
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = +2
Query: 125 YKFNVPPY--FSKTNDVPKQ*EML 190
++FNVPPY F + +D+P E++
Sbjct: 449 FRFNVPPYVSFLQASDIPTSVELM 472
>AF200199-1|AAF13716.1| 966|Caenorhabditis elegans MES-1 protein.
Length = 966
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = +2
Query: 125 YKFNVPPY--FSKTNDVPKQ*EML 190
++FNVPPY F + +D+P E++
Sbjct: 449 FRFNVPPYVSFLQASDIPTSVELM 472
>L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain
protein protein.
Length = 319
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 18 SLLAIHSTVQRTRRASKSLICSLRMSSYTTKASTFLTNSTFPLT 149
+L AIH Q R S L+C ++ ++ +++S PLT
Sbjct: 7 TLTAIHQQQQSHNRFSNPLVCVGQLDHHSLLPDDSISSSLAPLT 50
>Z81571-6|CAB04616.1| 460|Caenorhabditis elegans Hypothetical
protein M01G12.7 protein.
Length = 460
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 97 EDILKEHIRLFEARRVRWTVEWIAKRL 17
E+IL+E + FE WT+E KRL
Sbjct: 266 EEILEEVAKRFEGTEDHWTIEDGQKRL 292
>Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical
protein B0564.10b protein.
Length = 323
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 18 SLLAIHSTVQRTRRASKSLICSLRMSSYTTKASTFLTNSTFPLT 149
+L AIH Q R S L+C ++ ++ +++S PLT
Sbjct: 7 TLTAIHQQQQSHNRFSNPLVCVGQLDHHSLLPEHSISSSLAPLT 50
>Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical
protein B0564.10a protein.
Length = 319
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 18 SLLAIHSTVQRTRRASKSLICSLRMSSYTTKASTFLTNSTFPLT 149
+L AIH Q R S L+C ++ ++ +++S PLT
Sbjct: 7 TLTAIHQQQQSHNRFSNPLVCVGQLDHHSLLPEHSISSSLAPLT 50
>U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family
protein 4 protein.
Length = 351
Score = 25.4 bits (53), Expect = 9.7
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 205 LIGKF*HLLLFRNIIGFRKVRGNVEFVR---KVLAFVVYEDILKEHIRLFE 62
++GK HLLL N VR N E V K+L +DI K ++ LFE
Sbjct: 158 VVGKMMHLLLCNNREEGLGVRVNDELVDKHVKILMTTTIDDIAK-NVNLFE 207
>U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical
protein ZC155.3 protein.
Length = 845
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 133 EFVRKVLAFVVYEDILKEHIRLFEARRVRWTVEWIAKR 20
E +RK L F+ + ++ H+R + R + WIAK+
Sbjct: 236 ESLRKYLEFIYLKPRMRIHVRGEQVLPKRISENWIAKK 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,534,479
Number of Sequences: 27780
Number of extensions: 99031
Number of successful extensions: 254
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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