Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_P06
(532 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-23|AAP31422.1| 187|Caenorhabditis elegans Hypothetical... 32 0.29
AC084158-22|AAM15623.1| 214|Caenorhabditis elegans Hypothetical... 32 0.29
AC084158-21|AAK68581.1| 271|Caenorhabditis elegans Hypothetical... 32 0.29
Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical pr... 30 0.90
Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical pr... 30 0.90
Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical pr... 30 0.90
AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calc... 30 0.90
AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calc... 30 0.90
AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPas... 30 0.90
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 29 2.1
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 29 2.7
Z22181-12|CAA80188.1| 161|Caenorhabditis elegans Hypothetical p... 28 3.6
U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical p... 28 3.6
AY324109-1|AAP85302.1| 161|Caenorhabditis elegans LIN-52 protein. 28 3.6
U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astaci... 28 4.8
CU457740-6|CAM36336.1| 365|Caenorhabditis elegans Hypothetical ... 28 4.8
AF016676-2|AAG24106.1| 500|Caenorhabditis elegans Cytochrome p4... 27 6.3
AF016438-14|AAB65888.1| 493|Caenorhabditis elegans Cytochrome p... 27 6.3
Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical p... 27 8.4
>AC084158-23|AAP31422.1| 187|Caenorhabditis elegans Hypothetical
protein Y69A2AR.7c protein.
Length = 187
Score = 31.9 bits (69), Expect = 0.29
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 131 MKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTLP 253
++K QR+ +D+ + L +C +H+NH+ TP P + +P
Sbjct: 104 LQKMRQRVADDIGEKVLDIC--EHINHNHYTPKMPTKTEIP 142
>AC084158-22|AAM15623.1| 214|Caenorhabditis elegans Hypothetical
protein Y69A2AR.7b protein.
Length = 214
Score = 31.9 bits (69), Expect = 0.29
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 131 MKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTLP 253
++K QR+ +D+ + L +C +H+NH+ TP P + +P
Sbjct: 131 LQKMRQRVADDIGEKVLDIC--EHINHNHYTPKMPTKTEIP 169
>AC084158-21|AAK68581.1| 271|Caenorhabditis elegans Hypothetical
protein Y69A2AR.7a protein.
Length = 271
Score = 31.9 bits (69), Expect = 0.29
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 131 MKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTLP 253
++K QR+ +D+ + L +C +H+NH+ TP P + +P
Sbjct: 177 LQKMRQRVADDIGEKVLDIC--EHINHNHYTPKMPTKTEIP 215
>Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical
protein W09C2.3c protein.
Length = 1249
Score = 30.3 bits (65), Expect = 0.90
Identities = 23/77 (29%), Positives = 33/77 (42%)
Frame = +2
Query: 71 STMKRQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTL 250
+ + R L ET+G T IC K N + + S + NH TS + P L
Sbjct: 455 NNLVRHLDACETMGNATSICSDKTGTLTTNRMTVVQ----SYINGNHYTSQEAQPHGANL 510
Query: 251 PNRTSRPCILSAIXQDC 301
P T P ++ AI +C
Sbjct: 511 PGSTG-PILMEAISVNC 526
>Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical
protein W09C2.3b protein.
Length = 1228
Score = 30.3 bits (65), Expect = 0.90
Identities = 23/77 (29%), Positives = 33/77 (42%)
Frame = +2
Query: 71 STMKRQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTL 250
+ + R L ET+G T IC K N + + S + NH TS + P L
Sbjct: 434 NNLVRHLDACETMGNATSICSDKTGTLTTNRMTVVQ----SYINGNHYTSQEAQPHGANL 489
Query: 251 PNRTSRPCILSAIXQDC 301
P T P ++ AI +C
Sbjct: 490 PGSTG-PILMEAISVNC 505
>Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical
protein W09C2.3a protein.
Length = 1252
Score = 30.3 bits (65), Expect = 0.90
Identities = 23/77 (29%), Positives = 33/77 (42%)
Frame = +2
Query: 71 STMKRQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTL 250
+ + R L ET+G T IC K N + + S + NH TS + P L
Sbjct: 458 NNLVRHLDACETMGNATSICSDKTGTLTTNRMTVVQ----SYINGNHYTSQEAQPHGANL 513
Query: 251 PNRTSRPCILSAIXQDC 301
P T P ++ AI +C
Sbjct: 514 PGSTG-PILMEAISVNC 529
>AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calcium
ATPase (136.9kD) (mca-1) protein.
Length = 1249
Score = 30.3 bits (65), Expect = 0.90
Identities = 23/77 (29%), Positives = 33/77 (42%)
Frame = +2
Query: 71 STMKRQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTL 250
+ + R L ET+G T IC K N + + S + NH TS + P L
Sbjct: 455 NNLVRHLDACETMGNATSICSDKTGTLTTNRMTVVQ----SYINGNHYTSQEAQPHGANL 510
Query: 251 PNRTSRPCILSAIXQDC 301
P T P ++ AI +C
Sbjct: 511 PGSTG-PILMEAISVNC 526
>AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calcium
ATPase (136.6kD) (mca-1) protein.
Length = 1252
Score = 30.3 bits (65), Expect = 0.90
Identities = 23/77 (29%), Positives = 33/77 (42%)
Frame = +2
Query: 71 STMKRQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTL 250
+ + R L ET+G T IC K N + + S + NH TS + P L
Sbjct: 458 NNLVRHLDACETMGNATSICSDKTGTLTTNRMTVVQ----SYINGNHYTSQEAQPHGANL 513
Query: 251 PNRTSRPCILSAIXQDC 301
P T P ++ AI +C
Sbjct: 514 PGSTG-PILMEAISVNC 529
>AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPase
protein.
Length = 1228
Score = 30.3 bits (65), Expect = 0.90
Identities = 23/77 (29%), Positives = 33/77 (42%)
Frame = +2
Query: 71 STMKRQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTL 250
+ + R L ET+G T IC K N + + S + NH TS + P L
Sbjct: 434 NNLVRHLDACETMGNATSICSDKTGTLTTNRMTVVQ----SYINGNHYTSQEAQPHGANL 489
Query: 251 PNRTSRPCILSAIXQDC 301
P T P ++ AI +C
Sbjct: 490 PGSTG-PILMEAISVNC 505
>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical
protein F48F5.1 protein.
Length = 1291
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 20 VQSLQKGKSNRMARKLISTMKRQLTLSETIG--KRTPICMKKKLQRIINDLMKLSLAMCS 193
+Q L+K +++ + T K SET+ K+ P MKK ++ + +L K S ++
Sbjct: 490 IQKLRK-LDDKLLESVQQTAKSVSQFSETLASVKKIPDAMKKNVKNVTLELNKRSESLNQ 548
Query: 194 VQHLNHSTS 220
++HS S
Sbjct: 549 SDAISHSAS 557
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 508 WLTNLEVVWVTSLNLFFGQEYTVSGHQXWL*SKNV 404
W+TNL + NL+F +Y + G L SK V
Sbjct: 142 WITNLHYAFQDEKNLYFVMDYYIGGDMLTLLSKFV 176
>Z22181-12|CAA80188.1| 161|Caenorhabditis elegans Hypothetical
protein ZK632.13 protein.
Length = 161
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 8 EKTFVQSLQKGKSNRMARKLISTMKRQLTLSETIGKRT-PICMK 136
++ FVQ + + KSN K++ K+ L +ET+ + + P+ MK
Sbjct: 15 DEMFVQQMIEKKSNAEQAKMLEQQKKMLECTETMPEESEPVPMK 58
>U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical
protein C34D4.1 protein.
Length = 512
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 212 STSTPSCPVRLTLPNRTSRPCI 277
ST T S P+ P R SRPC+
Sbjct: 123 STPTTSVPIHFDSPRRESRPCL 144
>AY324109-1|AAP85302.1| 161|Caenorhabditis elegans LIN-52 protein.
Length = 161
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 8 EKTFVQSLQKGKSNRMARKLISTMKRQLTLSETIGKRT-PICMK 136
++ FVQ + + KSN K++ K+ L +ET+ + + P+ MK
Sbjct: 15 DEMFVQQMIEKKSNAEQAKMLEQQKKMLECTETMPEESEPVPMK 58
>U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astacin
protease protein38 protein.
Length = 745
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 73 HDEKAINFVGNYWQENADLYEEEV 144
HDE A+N Y+Q + DL E++V
Sbjct: 75 HDELAVNNADEYFQGDVDLSEQQV 98
>CU457740-6|CAM36336.1| 365|Caenorhabditis elegans Hypothetical
protein C50E10.6 protein.
Length = 365
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -2
Query: 174 NFIRSLIILCNFFFIQIGVLLPIVSDKVNCLFIVEINFLAIRFDLPFCRDCTK 16
N + S+ L FFF I L P++ V L + + + + F LPF TK
Sbjct: 281 NLVPSMNTLLIFFFENIIHLNPLIISPVLILSVGSWSKVLLNFHLPFVEKITK 333
>AF016676-2|AAG24106.1| 500|Caenorhabditis elegans Cytochrome p450
family protein 33C3 protein.
Length = 500
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +1
Query: 34 ERQIESYGKKIDFHDEKAINFVGNYWQE 117
+ QIE++ KKIDF ++++++ Y +E
Sbjct: 246 DTQIENHRKKIDFDSQESLDYAEAYLKE 273
>AF016438-14|AAB65888.1| 493|Caenorhabditis elegans Cytochrome p450
family protein 33C4 protein.
Length = 493
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +1
Query: 34 ERQIESYGKKIDFHDEKAINFVGNYWQE 117
+ QIE++ KKIDF ++++++ Y +E
Sbjct: 246 DTQIENHRKKIDFDSQESLDYAEAYLKE 273
>Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 511 SWLTNLEVVWVTSLNLFFGQEYTVSGHQXWL 419
S+L+ + +T + F GQ+Y + H WL
Sbjct: 155 SFLSEVSYSSMTMVGSFLGQDYIIGSHLFWL 185
>Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 511 SWLTNLEVVWVTSLNLFFGQEYTVSGHQXWL 419
S+L+ + +T + F GQ+Y + H WL
Sbjct: 155 SFLSEVSYSSMTMVGSFLGQDYIIGSHLFWL 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,963,711
Number of Sequences: 27780
Number of extensions: 241719
Number of successful extensions: 748
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -