Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_P05
         (354 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M90657-1|AAA36158.1|  202|Homo sapiens L6 protein.                     31   1.3  
CR456953-1|CAG33234.1|  202|Homo sapiens TM4SF1 protein.               31   1.3  
BC034145-1|AAH34145.1|  232|Homo sapiens TM4SF1 protein protein.       31   1.3  
BC010166-1|AAH10166.1|  202|Homo sapiens transmembrane 4 L six f...    31   1.3  
BC008442-1|AAH08442.1|  202|Homo sapiens transmembrane 4 L six f...    31   1.3  
BC131611-1|AAI31612.1|  298|Homo sapiens keratin associated prot...    29   4.1  
BC130511-1|AAI30512.1|   98|Homo sapiens late cornified envelope...    29   4.1  
BC130507-1|AAI30508.1|   98|Homo sapiens late cornified envelope...    29   4.1  
BC087854-1|AAH87854.1|   98|Homo sapiens late cornified envelope...    29   4.1  
AL161636-2|CAI19557.1|   98|Homo sapiens novel small proline ric...    29   4.1  
AB076359-1|BAD01546.1|  298|Homo sapiens keratin associated prot...    29   4.1  
BC125049-1|AAI25050.1|  401|Homo sapiens keratin associated prot...    28   7.2  
BC125048-1|AAI25049.1|  401|Homo sapiens keratin associated prot...    28   7.2  
BC051694-1|AAH51694.1|  677|Homo sapiens similar to KIAA1680 pro...    28   7.2  
AB076351-1|BAD01538.1|  401|Homo sapiens keratin associated prot...    28   7.2  
AB051467-1|BAB21771.1|  902|Homo sapiens KIAA1680 protein protein.     28   7.2  
BC107762-1|AAI07763.1|  172|Homo sapiens DISP1 protein protein.        28   9.5  

>M90657-1|AAA36158.1|  202|Homo sapiens L6 protein.
          Length = 202

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -2

Query: 317 GIQQGTAAGGCPHESCG--CLSQSSQIAGILG 228
           G++Q    G C HE+CG  C   SS +A ++G
Sbjct: 69  GLEQDDCCGCCGHENCGKRCAMLSSVLAALIG 100


>CR456953-1|CAG33234.1|  202|Homo sapiens TM4SF1 protein.
          Length = 202

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -2

Query: 317 GIQQGTAAGGCPHESCG--CLSQSSQIAGILG 228
           G++Q    G C HE+CG  C   SS +A ++G
Sbjct: 69  GLEQDDCCGCCGHENCGKRCAMLSSVLAALIG 100


>BC034145-1|AAH34145.1|  232|Homo sapiens TM4SF1 protein protein.
          Length = 232

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -2

Query: 317 GIQQGTAAGGCPHESCG--CLSQSSQIAGILG 228
           G++Q    G C HE+CG  C   SS +A ++G
Sbjct: 69  GLEQDDCCGCCGHENCGKRCAMLSSVLAALIG 100


>BC010166-1|AAH10166.1|  202|Homo sapiens transmembrane 4 L six
           family member 1 protein.
          Length = 202

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -2

Query: 317 GIQQGTAAGGCPHESCG--CLSQSSQIAGILG 228
           G++Q    G C HE+CG  C   SS +A ++G
Sbjct: 69  GLEQDDCCGCCGHENCGKRCAMLSSVLAALIG 100


>BC008442-1|AAH08442.1|  202|Homo sapiens transmembrane 4 L six
           family member 1 protein.
          Length = 202

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -2

Query: 317 GIQQGTAAGGCPHESCG--CLSQSSQIAGILG 228
           G++Q    G C HE+CG  C   SS +A ++G
Sbjct: 69  GLEQDDCCGCCGHENCGKRCAMLSSVLAALIG 100


>BC131611-1|AAI31612.1|  298|Homo sapiens keratin associated protein
           10-11 protein.
          Length = 298

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 274 DSCGHPPAAVPCCMPPSVALSADLTP 351
           +SC  PP + P C  P+ +LS   TP
Sbjct: 24  ESCCEPPCSAPSCCAPAPSLSLVCTP 49


>BC130511-1|AAI30512.1|   98|Homo sapiens late cornified
           envelope-like proline-rich 1 protein.
          Length = 98

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 196 ETPCDFSCQPDPRIPAI*LLCDKHPHDSCGHPPAAVPC 309
           E  C+  CQP      +    +K P + C  PP  +PC
Sbjct: 24  EQKCESKCQPSCLKKLLQRCFEKCPWEKCPAPPKCLPC 61


>BC130507-1|AAI30508.1|   98|Homo sapiens late cornified
           envelope-like proline-rich 1 protein.
          Length = 98

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 196 ETPCDFSCQPDPRIPAI*LLCDKHPHDSCGHPPAAVPC 309
           E  C+  CQP      +    +K P + C  PP  +PC
Sbjct: 24  EQKCESKCQPSCLKKLLQRCFEKCPWEKCPAPPKCLPC 61


>BC087854-1|AAH87854.1|   98|Homo sapiens late cornified
           envelope-like proline-rich 1 protein.
          Length = 98

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 196 ETPCDFSCQPDPRIPAI*LLCDKHPHDSCGHPPAAVPC 309
           E  C+  CQP      +    +K P + C  PP  +PC
Sbjct: 24  EQKCESKCQPSCLKKLLQRCFEKCPWEKCPAPPKCLPC 61


>AL161636-2|CAI19557.1|   98|Homo sapiens novel small proline rich
           protein protein.
          Length = 98

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 196 ETPCDFSCQPDPRIPAI*LLCDKHPHDSCGHPPAAVPC 309
           E  C+  CQP      +    +K P + C  PP  +PC
Sbjct: 24  EQKCESKCQPSCLKKLLQRCFEKCPWEKCPAPPKCLPC 61


>AB076359-1|BAD01546.1|  298|Homo sapiens keratin associated protein
           protein.
          Length = 298

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 274 DSCGHPPAAVPCCMPPSVALSADLTP 351
           +SC  PP + P C  P+ +LS   TP
Sbjct: 24  ESCCEPPCSAPSCCAPAPSLSLVCTP 49


>BC125049-1|AAI25050.1|  401|Homo sapiens keratin associated protein
           10-4 protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 274 DSCGHPPAAVPCCMPPSVALSADLTP 351
           +SC  PP   P C  P+  LS   TP
Sbjct: 34  ESCCEPPCCAPSCCAPAPCLSLVCTP 59


>BC125048-1|AAI25049.1|  401|Homo sapiens keratin associated protein
           10-4 protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 274 DSCGHPPAAVPCCMPPSVALSADLTP 351
           +SC  PP   P C  P+  LS   TP
Sbjct: 34  ESCCEPPCCAPSCCAPAPCLSLVCTP 59


>BC051694-1|AAH51694.1|  677|Homo sapiens similar to KIAA1680
           protein protein.
          Length = 677

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = -1

Query: 249 SDSRDSRVRLTGEITRGFERSY-HQTPQTVSIDCSAKYITVGDKADTRSIRAQEAIRRIT 73
           S SR+ ++  T  +T  FER   H T + V I+C +   + GD +     + + ++++ T
Sbjct: 120 SSSRNKKI--TRSLTEDFEREKEHSTNKNVFINCLSSGKSEGDDSGFTEDQTRRSVKQST 177

Query: 72  R 70
           R
Sbjct: 178 R 178


>AB076351-1|BAD01538.1|  401|Homo sapiens keratin associated protein
           protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 274 DSCGHPPAAVPCCMPPSVALSADLTP 351
           +SC  PP   P C  P+  LS   TP
Sbjct: 34  ESCCEPPCCAPSCCAPAPCLSLVCTP 59


>AB051467-1|BAB21771.1|  902|Homo sapiens KIAA1680 protein protein.
          Length = 902

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = -1

Query: 249 SDSRDSRVRLTGEITRGFERSY-HQTPQTVSIDCSAKYITVGDKADTRSIRAQEAIRRIT 73
           S SR+ ++  T  +T  FER   H T + V I+C +   + GD +     + + ++++ T
Sbjct: 122 SSSRNKKI--TRSLTEDFEREKEHSTNKNVFINCLSSGKSEGDDSGFTEDQTRRSVKQST 179

Query: 72  R 70
           R
Sbjct: 180 R 180


>BC107762-1|AAI07763.1|  172|Homo sapiens DISP1 protein protein.
          Length = 172

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +1

Query: 265 HPHDSCGHPPAAVPCCMPPSVALSADLTP 351
           HP+     P A   CCM P    SA L P
Sbjct: 101 HPNAGPAAPSALASCCMQPHSEYSASLCP 129


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,056,025
Number of Sequences: 237096
Number of extensions: 1297435
Number of successful extensions: 2777
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2774
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)