Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_P05
         (354 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81147-12|CAB03539.2|  494|Caenorhabditis elegans Hypothetical p...    28   1.6  
Z68493-8|CAA92795.1|  336|Caenorhabditis elegans Hypothetical pr...    28   1.6  
Z83227-3|CAB05726.2|  241|Caenorhabditis elegans Hypothetical pr...    27   5.0  
U41996-1|AAA83471.2|  306|Caenorhabditis elegans Serpentine rece...    27   5.0  
AF003390-5|AAB54270.2|  873|Caenorhabditis elegans Hypothetical ...    27   5.0  
U41104-6|AAK77633.2|  419|Caenorhabditis elegans Hypothetical pr...    26   6.6  
AF077545-1|AAC26306.2|  506|Caenorhabditis elegans Hypothetical ...    26   6.6  
AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical...    26   6.6  
AC006809-4|AAO25980.1|  339|Caenorhabditis elegans Activated in ...    26   8.7  

>Z81147-12|CAB03539.2|  494|Caenorhabditis elegans Hypothetical
           protein T09E11.6 protein.
          Length = 494

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 189 SYHQTPQTVSIDCSAKYITVGDKADTRSIRAQEAIRRITRVNSN 58
           SY + P+T  +DC    I  GDK   +S+     ++ +   N N
Sbjct: 90  SYRRRPETAHVDCGR--ILAGDKPYLQSLTGTNRVKIVENCNLN 131


>Z68493-8|CAA92795.1|  336|Caenorhabditis elegans Hypothetical
           protein C33A12.11 protein.
          Length = 336

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
 Frame = +2

Query: 263 NTRMTHVGIPLLLYLAVC------PRLWLCRRTLRP 352
           NT++ H+G+P+L    +C      P L +CR+   P
Sbjct: 151 NTKIIHIGVPILFLYPICFTFYFIPALGICRQFTFP 186


>Z83227-3|CAB05726.2|  241|Caenorhabditis elegans Hypothetical
           protein F45B8.3 protein.
          Length = 241

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
 Frame = +1

Query: 268 PHDSCGHPPA-AVPCCMPP 321
           P   C  PPA A PCC PP
Sbjct: 106 PAPCCPPPPAPAAPCCPPP 124



 Score = 26.2 bits (55), Expect = 6.6
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 280 CGHPPAAVPCCMPP 321
           CG  P   PCC PP
Sbjct: 100 CGPSPVPAPCCPPP 113


>U41996-1|AAA83471.2|  306|Caenorhabditis elegans Serpentine
           receptor, class sx protein22 protein.
          Length = 306

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 83  LIASCALILRVSALSPTVMYLAEQSILTVC 172
           ++ SC  IL +      + YL+E  +LTVC
Sbjct: 124 IVFSCCCILSLVVSLAKLFYLSEDIVLTVC 153


>AF003390-5|AAB54270.2|  873|Caenorhabditis elegans Hypothetical
           protein R155.4 protein.
          Length = 873

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 281 VGIPLLLYLAVCPRLW 328
           +GIPLL+ +AVC  +W
Sbjct: 802 IGIPLLIIIAVCVGVW 817


>U41104-6|AAK77633.2|  419|Caenorhabditis elegans Hypothetical
           protein T12C9.7 protein.
          Length = 419

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +1

Query: 13  PTRTHDLVPVLSTTLIRIHSG-YPSDRLLRSYTPCISFVTDSYVF 144
           P + H    +L  +++ +H+  +PSD +  + T C++F  DS V+
Sbjct: 275 PAKIHLTYYLLELSILYVHNRRFPSDVVANAAT-CLAFAIDSEVY 318


>AF077545-1|AAC26306.2|  506|Caenorhabditis elegans Hypothetical
           protein H41C03.3 protein.
          Length = 506

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 16/68 (23%), Positives = 31/68 (45%)
 Frame = -1

Query: 213 EITRGFERSYHQTPQTVSIDCSAKYITVGDKADTRSIRAQEAIRRITRVNSN*CGR*DWH 34
           E+   F+  Y + P+T  IDC    I   DK   +++  ++ ++ +   N N       +
Sbjct: 89  ELKTEFKAIYPRRPETDHIDCGR--ILADDKVYLQTVSGKDRVKIVENKNLNMSCSAIMN 146

Query: 33  KIMSSSRD 10
           +I+ S  D
Sbjct: 147 RILPSGND 154


>AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical
           protein T05H4.3 protein.
          Length = 1152

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +2

Query: 242 LSDYSVTNTRMTHVGIPLLLYL 307
           +S+ S++NT +  +GIPLLL L
Sbjct: 911 ISNNSISNTSILRLGIPLLLKL 932


>AC006809-4|AAO25980.1|  339|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 4 protein.
          Length = 339

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
 Frame = +1

Query: 190 AFETPCDFSCQPDPRIPAI*LLCDKHPHDSCGHPPAAVPC---CMP 318
           A +  C   CQ  P +      C +    S  + PA V C   CMP
Sbjct: 89  ACQQSCQMQCQSAPSVSQCQSTCQQSCQASSCYTPAPVQCQPSCMP 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,643,069
Number of Sequences: 27780
Number of extensions: 181863
Number of successful extensions: 421
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)