Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_P05
         (354 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   4.3  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    20   7.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   9.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   9.9  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 197 KPRVISPVSRTLESRLSDYSVTNTRMTHV 283
           KPRV+SP     ++  +D+S+   +  HV
Sbjct: 193 KPRVLSPPLNNNDATPTDFSM-GVKNNHV 220


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 76  YPSDRLLRSYTPCI 117
           +P D  L+ YT CI
Sbjct: 59  FPDDHDLQCYTTCI 72


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 292 PAAVPCCMPPS 324
           P  +PC  PPS
Sbjct: 309 PKKMPCTQPPS 319


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 300 CTLLYAPVCGSVGGPYAH 353
           C   + PVC S G  YA+
Sbjct: 110 CPRRHRPVCASNGKIYAN 127


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,180
Number of Sequences: 438
Number of extensions: 2060
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8184330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)