Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_P04
         (254 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   2.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   2.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    19   6.3  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    19   8.4  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.6 bits (41), Expect = 2.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 238 PWLLSKLALGPLPPFLQH*TSIFICSLIAKASPQHLP 128
           P+   K A    PP  +  T+I+  S   + SPQ  P
Sbjct: 445 PYYKLKTANNKRPPSTELGTNIYTSSKRQRTSPQLSP 481


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 2.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 163 SLIAKASPQHLPHDPALYFT 104
           S  + AS  H+ H P  Y T
Sbjct: 151 SAYSSASRHHVDHQPVPYLT 170


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 19.4 bits (38), Expect = 6.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 211 GPLPPFLQH*TSIFICSL 158
           GP+   LQ+ T +FI SL
Sbjct: 106 GPVKIMLQNATDLFIKSL 123


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 19.0 bits (37), Expect = 8.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 124 DPALYFTLNPR 92
           DPA+Y  L PR
Sbjct: 87  DPAIYSNLLPR 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,959
Number of Sequences: 336
Number of extensions: 662
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  3951341
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)