Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_P04
         (254 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   1.4  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   1.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   2.4  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    20   4.1  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 1.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 214 VLAWTKAKELYS 249
           +L WT A+ELYS
Sbjct: 13  LLTWTYAEELYS 24


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 1.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 214 VLAWTKAKELYS 249
           +L WT A+ELYS
Sbjct: 13  LLTWTYAEELYS 24


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 152 GY*GADKYTRLMLQKW 199
           G+  +D+  RLMLQ W
Sbjct: 572 GWHPSDRSARLMLQPW 587


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 20.2 bits (40), Expect = 4.1
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 167 DKYTRLMLQKWWQRTQC*LGQKPRSY 244
           ++YT    QK +Q  QC   Q P  +
Sbjct: 115 EEYTGDDCQKTYQYVQCHYKQNPEKF 140


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,357
Number of Sequences: 438
Number of extensions: 904
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4511484
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)