Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_P01
         (562 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 16/69 (23%), Positives = 28/69 (40%)
 Frame = -1

Query: 517 LTSGGNAFTVLNKINVLKIKALYLKIHYY*NKKKTNSLQYEKIETNEWFFLFKTSSNSHC 338
           +TS    FT+   +   K     + +H   NK+   SLQ   +++    F        + 
Sbjct: 1   MTSKARTFTIKCPVKKRKCTVSNVSLHSLKNKRSGASLQVGILDS--LVFKCYNLRRIYY 58

Query: 337 FYTINYTQN 311
           FY ++ T N
Sbjct: 59  FYCVSITFN 67


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 205 YTEVCTCTCPDG 240
           Y +  TCTCP G
Sbjct: 3   YVDSYTCTCPLG 14


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 70  VALTYVNGNKVKSYICQGY 126
           + L +  G  +KS+  QGY
Sbjct: 79  IILVFSKGKVIKSFFNQGY 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,501
Number of Sequences: 336
Number of extensions: 2551
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)