Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_O23
(357 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38459| Best HMM Match : DUF948 (HMM E-Value=0.63) 32 0.16
SB_3479| Best HMM Match : PAH (HMM E-Value=4.7) 30 0.64
SB_26540| Best HMM Match : UBA (HMM E-Value=6.2) 29 1.1
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.9
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 28 1.9
SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011) 28 2.6
SB_25636| Best HMM Match : UBA (HMM E-Value=6.9) 28 2.6
SB_24878| Best HMM Match : JTB (HMM E-Value=1.6) 28 2.6
SB_4458| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.6
SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.6
SB_39017| Best HMM Match : Treacle (HMM E-Value=1.7) 28 2.6
SB_31340| Best HMM Match : DUF935 (HMM E-Value=0.19) 28 2.6
SB_4210| Best HMM Match : JTB (HMM E-Value=5.8) 28 2.6
SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17) 27 3.4
SB_29899| Best HMM Match : 7tm_1 (HMM E-Value=1.96182e-44) 27 4.5
SB_16204| Best HMM Match : 7tm_1 (HMM E-Value=2e-06) 27 4.5
SB_7284| Best HMM Match : F5_F8_type_C (HMM E-Value=7.3e-10) 27 4.5
SB_5537| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.5
SB_49775| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_18992| Best HMM Match : Oxidored_q3 (HMM E-Value=5.1) 27 5.9
SB_50643| Best HMM Match : Phosphodiest (HMM E-Value=0) 27 5.9
SB_37419| Best HMM Match : Pox_A32 (HMM E-Value=0.24) 26 7.8
SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025) 26 7.8
>SB_38459| Best HMM Match : DUF948 (HMM E-Value=0.63)
Length = 276
Score = 31.9 bits (69), Expect = 0.16
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 79 CINNYLYVTI*Y-ICI-FYKVHL-YSAVCFFFSFLCFIYYCYMKPHSKCIVY*YSIIWSF 249
C+ Y Y +C+ +YKV + Y VCF + +CF YY + K V Y + +
Sbjct: 13 CVRYYKVCVRYYKVCVRYYKVCIRYYKVCFRYYKVCFRYYKVCVRYYKVCVRYYKVCVRY 72
Query: 250 NQLCWR 267
++C R
Sbjct: 73 YKVCIR 78
Score = 31.9 bits (69), Expect = 0.16
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 79 CINNYLYVTI*Y-ICI-FYKVHL-YSAVCFFFSFLCFIYYCYMKPHSKCIVY*YSIIWSF 249
C+ Y Y +C+ +YKV + Y VCF + +CF YY + K V Y + +
Sbjct: 55 CVRYYKVCVRYYKVCVRYYKVCIRYYKVCFRYYKVCFRYYKVCVRYYKVCVRYYKVCVMY 114
Query: 250 NQLCWR 267
++C R
Sbjct: 115 YKVCVR 120
Score = 30.3 bits (65), Expect = 0.48
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +1
Query: 79 CINNYLYVTI*Y-ICI-FYKVHL-YSAVCFFFSFLCFIYYCYMKPHSKCIVY*YSIIWSF 249
C+ Y Y +CI +YKV Y VCF + +C YY + K V Y + +
Sbjct: 20 CVRYYKVCVRYYKVCIRYYKVCFRYYKVCFRYYKVCVRYYKVCVRYYKVCVRYYKVCIRY 79
Query: 250 NQLCWR 267
++C+R
Sbjct: 80 YKVCFR 85
Score = 29.1 bits (62), Expect = 1.1
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +1
Query: 79 CINNYLYVTI*Y-ICI-FYKVHL-YSAVCFFFSFLCFIYY-CYMKPHSKCIVY*YSIIWS 246
CI Y Y +C +YKV + Y VC + +C +YY ++ + C++Y Y +
Sbjct: 76 CIRYYKVCFRYYKVCFRYYKVCVRYYKVCVRYYKVCVMYYKVCVRYYKVCVMY-YKVCVK 134
Query: 247 FNQLCWR 267
+ ++C+R
Sbjct: 135 YYKVCFR 141
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +1
Query: 121 IFYKVH-LYSAVCFFFSFLCFIYY-CYMKPHSKCIVY*YSIIWSFNQLCWR 267
++YKV +Y VC + +C YY ++ + CI Y Y + + + ++C+R
Sbjct: 1 MYYKVCVMYYKVCVRYYKVCVRYYKVCVRYYKVCIRY-YKVCFRYYKVCFR 50
Score = 27.5 bits (58), Expect = 3.4
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +1
Query: 79 CINNYLYVTI*Y--ICI-FYKVHL-YSAVCFFFSFLCFIYY-CYMKPHSKCIVY*YSIIW 243
C+ Y V I Y +C +YKV Y VC + +C YY ++ + CI Y Y + +
Sbjct: 27 CVR-YYKVCIRYYKVCFRYYKVCFRYYKVCVRYYKVCVRYYKVCVRYYKVCIRY-YKVCF 84
Query: 244 SFNQLCWR 267
+ ++C+R
Sbjct: 85 RYYKVCFR 92
>SB_3479| Best HMM Match : PAH (HMM E-Value=4.7)
Length = 222
Score = 29.9 bits (64), Expect = 0.64
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +1
Query: 79 CINNYLYVTI*Y-ICI-FYKVHL-YSAVCFFFSFLCFIYY-CYMKPHSKCIVY*YSIIWS 246
C+ Y Y +C+ +YKV + Y VC + +C +YY +K + C++Y Y +
Sbjct: 34 CVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVMYYKVCVKYYKVCVMY-YKVCVR 92
Query: 247 FNQLCWR 267
+ ++C R
Sbjct: 93 YYKVCVR 99
Score = 27.9 bits (59), Expect = 2.6
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +1
Query: 79 CINNYLYVTI*Y-ICI-FYKVH-LYSAVCFFFSFLCFIYYCYMKPHSKCIVY*YSIIWSF 249
C+ Y Y +C+ +YKV +Y VC + +C +YY + K V Y + +
Sbjct: 48 CVRYYKVCVRYYKVCVRYYKVCVMYYKVCVKYYKVCVMYYKVCVRYYKVCVRYYKVCVRY 107
Query: 250 NQLCWR 267
++C R
Sbjct: 108 YKVCVR 113
>SB_26540| Best HMM Match : UBA (HMM E-Value=6.2)
Length = 207
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 327 LDSWGSNPRRLTWNPAALNTAPTKLVKTPNNTI 229
L WG + R L ++P L +A T+L+ PN+ +
Sbjct: 48 LKDWGMSRRYLEYDPNTLRSAITELLDGPNSIV 80
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 28.3 bits (60), Expect = 1.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -1
Query: 312 SNPRRLTWNPAALNTAPTKLVKTPNNTILVNNA 214
+ P T P A T PT TPN T NA
Sbjct: 165 TTPNTTTTTPTATTTTPTATTTTPNTTTNTPNA 197
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -1
Query: 312 SNPRRLTWNPAALNTAPTKLVKTPNNTILVNNA 214
+ P T P A T P TPN T NA
Sbjct: 193 NTPNATTTTPTATTTTPNATTTTPNTTTTTPNA 225
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 312 SNPRRLTWNPAALNTAPTKLVKTPNNTILVNNAL 211
+ P RL P+ L T P++LV TP+ + + L
Sbjct: 1224 TTPSRLVTTPSRLVTTPSRLVTTPSRLVTTPSRL 1257
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 312 SNPRRLTWNPAALNTAPTKLVKTPNNTI 229
+ P RL P+ L T P++LV TP+ +
Sbjct: 1189 TTPSRLVTTPSRLVTTPSRLVTTPSRLV 1216
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 312 SNPRRLTWNPAALNTAPTKLVKTPNNTI 229
+ P RL P+ L T P++LV TP+ +
Sbjct: 1231 TTPSRLVTTPSRLVTTPSRLVTTPSRLV 1258
>SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011)
Length = 972
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/45 (26%), Positives = 18/45 (40%)
Frame = +1
Query: 91 YLYVTI*YICIFYKVHLYSAVCFFFSFLCFIYYCYMKPHSKCIVY 225
Y Y C +Y + C++ + C+ YY Y H C Y
Sbjct: 475 YCYYYCYCYCYYYCYYYCYCYCYYCCYYCYCYYYY--HHYYCCYY 517
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +1
Query: 67 IIRNCINNYLYVTI*YICIFYKVHLYSAVCFFFSFLCFIYYCY 195
++R C Y Y Y C Y + C+ + + C YYCY
Sbjct: 466 VLRYC---YCYCYCYYYCYCYCYYYCYYYCYCYCYYC-CYYCY 504
>SB_25636| Best HMM Match : UBA (HMM E-Value=6.9)
Length = 205
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 327 LDSWGSNPRRLTWNPAALNTAPTKLVKTPNNTI 229
L WG + R L ++P + +A T+L+ PN+ +
Sbjct: 48 LKDWGMSRRYLEYDPNTVRSAITELLDGPNSIV 80
>SB_24878| Best HMM Match : JTB (HMM E-Value=1.6)
Length = 603
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 327 LDSWGSNPRRLTWNPAALNTAPTKLVKTPNNTI 229
L WG + R L ++P + +A T+L+ PN+ +
Sbjct: 316 LKDWGMSRRYLEYDPNTVRSAITELLDGPNSIV 348
>SB_4458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 327 LDSWGSNPRRLTWNPAALNTAPTKLVKTPNNTI 229
L WG + R L ++P + +A T+L+ PN+ +
Sbjct: 48 LKDWGMSRRYLEYDPNTVRSAITELLDGPNSIV 80
>SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 27.9 bits (59), Expect = 2.6
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 291 WNPAALNTAPTKLVKTPNNTILVNN 217
WNP L+ + +L PN ++L++N
Sbjct: 196 WNPTVLDYSDDRLTLLPNGSLLISN 220
>SB_39017| Best HMM Match : Treacle (HMM E-Value=1.7)
Length = 415
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 342 GPILDLDSWGSN-PRRLTWNPAALNTAPTKLVKTPNNT 232
GPI L S ++ P T N +A +T PT L P NT
Sbjct: 27 GPIPSLSSLNNSAPETTTQNNSATSTTPTGLGLPPQNT 64
>SB_31340| Best HMM Match : DUF935 (HMM E-Value=0.19)
Length = 339
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 327 LDSWGSNPRRLTWNPAALNTAPTKLVKTPNNTI 229
L WG + R L ++P + +A T+L+ PN+ +
Sbjct: 48 LKDWGMSRRYLEYDPNTVRSAITELLDGPNSIV 80
>SB_4210| Best HMM Match : JTB (HMM E-Value=5.8)
Length = 427
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 327 LDSWGSNPRRLTWNPAALNTAPTKLVKTPNNTI 229
L WG + R L ++P + +A T+L+ PN+ +
Sbjct: 250 LKDWGMSRRYLEYDPNTVRSAITELLDGPNSIV 282
>SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17)
Length = 761
Score = 27.5 bits (58), Expect = 3.4
Identities = 20/82 (24%), Positives = 34/82 (41%)
Frame = +2
Query: 29 GYFFNFISANLHK*LETVLITIYM*LYSIFVFFIKYIYTVQFVFFFRFYASFIIVI*SLI 208
G F+F A + L + +Y F F+ + + V F F F+ +F+I + +
Sbjct: 664 GECFSFFFAFAFRRLRLDSVVFAFVVYPYFFLFVVFAFVV---FIFIFFFAFVIFVFNAF 720
Query: 209 QSALFTNIVLFGVLTSFVGAVF 274
+ +F V FV VF
Sbjct: 721 FVFVVFAFFVFLVFVFFVSVVF 742
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 83 LITIYM*LYSIFVFFIKYIYTVQFVFF-FRFYASFIIVI*SLIQSALFTNIVLFGVLTSF 259
L ++ + IF+FF ++ V FF F +A F+ ++ S +F V F V F
Sbjct: 695 LFVVFAFVVFIFIFFFAFVIFVFNAFFVFVVFAFFVFLVFVFFVSVVFVFFV-FVVYVFF 753
Query: 260 VGAVF 274
VF
Sbjct: 754 ALVVF 758
>SB_29899| Best HMM Match : 7tm_1 (HMM E-Value=1.96182e-44)
Length = 520
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 139 LYSAVCFFFSFLCFIYYCYMKPHS 210
LYS +C+ LC I CY K ++
Sbjct: 193 LYSVICYIALPLCVIVVCYAKVYA 216
>SB_16204| Best HMM Match : 7tm_1 (HMM E-Value=2e-06)
Length = 294
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 115 ICIFYKVHLYSAVCFFFSFLCFIYYCYMKPHSKCIVY*YSIIWSFNQLCW 264
+C+ +H S V F C + MK ++ I+Y IW FN CW
Sbjct: 158 VCLMVSIH--SLVLVAFERFCAVVRP-MKTYAVIIIY----IWEFNIPCW 200
>SB_7284| Best HMM Match : F5_F8_type_C (HMM E-Value=7.3e-10)
Length = 725
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 139 LYSAVCFFFSFLCFIYYCYMKPHS 210
LYS +C+ LC I CY K ++
Sbjct: 383 LYSVICYIALPLCVIVVCYAKVYA 406
>SB_5537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 139 LYSAVCFFFSFLCFIYYCYMKPHS 210
LYS +C+ LC I CY K ++
Sbjct: 167 LYSVICYIALPLCVIVVCYAKVYA 190
>SB_49775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 26.6 bits (56), Expect = 5.9
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +2
Query: 149 QFVFFFRFYASFIIVI*SLIQSALFTNIVLFGVLTSFVGAVFSAAGFHVNRRGF 310
QF R Y S I+ + A+F NI+ VL +F+ SA G+ RGF
Sbjct: 146 QFQMLLRKYESLIMASCGI---AIFENIIQTMVLFAFMTCEPSARGYEQLLRGF 196
>SB_18992| Best HMM Match : Oxidored_q3 (HMM E-Value=5.1)
Length = 186
Score = 26.6 bits (56), Expect = 5.9
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +2
Query: 149 QFVFFFRFYASFIIVI*SLIQSALFTNIVLFGVLTSFVGAVFSAAGFHVNRRGF 310
QF R Y S I+ + A+F NI+ VL +F+ SA G+ RGF
Sbjct: 60 QFQMLLRKYESLIMASCGI---AIFENIIQTMVLFAFMTCEPSARGYEQLLRGF 110
>SB_50643| Best HMM Match : Phosphodiest (HMM E-Value=0)
Length = 471
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 261 LAQCLVRPDSTSIDAGS 311
L QCL+RP STS GS
Sbjct: 11 LVQCLIRPTSTSPSGGS 27
>SB_37419| Best HMM Match : Pox_A32 (HMM E-Value=0.24)
Length = 1497
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 327 LDSWGSNPRRLTWNPAALNTAPTKLVKTPNNTI 229
+ S +P T +PAALNT KL +P ++
Sbjct: 351 MSSHAFSPEHFTASPAALNTKFAKLPTSPGRSL 383
>SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025)
Length = 2182
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = -1
Query: 333 LDLDSWGSNPRRLTWNPAALNTAPTKLVKTPNNTILVNNAL*MRLHITIINEA*KRKKKT 154
LD+ W SNP + PA + A K N + + LHI + A K++T
Sbjct: 2084 LDVHQWPSNPVQQVREPAQIQGAYAKGTDVLNRESNASRIRTLHLHIYLKPHANGHKERT 2143
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,441,982
Number of Sequences: 59808
Number of extensions: 166279
Number of successful extensions: 411
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 560496285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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