BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_O23
(357 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT028798-1|ABI34179.1| 1567|Drosophila melanogaster LD03710p pro... 28 4.0
AY052006-1|AAK93430.1| 1561|Drosophila melanogaster LD46954p pro... 28 4.0
AE013599-2155|AAF58081.2| 1567|Drosophila melanogaster CG8370-PA... 28 4.0
BT029428-1|ABK57085.1| 710|Drosophila melanogaster IP09654p pro... 27 7.0
BT025109-1|ABE73280.1| 412|Drosophila melanogaster IP10459p pro... 27 7.0
AE013599-3613|AAF47014.1| 361|Drosophila melanogaster CG13556-P... 27 7.0
>BT028798-1|ABI34179.1| 1567|Drosophila melanogaster LD03710p protein.
Length = 1567
Score = 27.9 bits (59), Expect = 4.0
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 200 SLIQSALFTNIVLFGVLTSFVGAVFSAAGFHVNRRGFDPQLSKSKIGPSF 349
SL +AL + FG++ V AVF A V + +D +K + P+F
Sbjct: 1046 SLKNAALVVLLASFGLV--LVAAVFDAKAIMVQQNAYDAARNKGPLQPTF 1093
>AY052006-1|AAK93430.1| 1561|Drosophila melanogaster LD46954p protein.
Length = 1561
Score = 27.9 bits (59), Expect = 4.0
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 200 SLIQSALFTNIVLFGVLTSFVGAVFSAAGFHVNRRGFDPQLSKSKIGPSF 349
SL +AL + FG++ V AVF A V + +D +K + P+F
Sbjct: 1040 SLKNAALVVLLASFGLV--LVAAVFDAKAIMVQQNAYDAARNKGPLQPTF 1087
>AE013599-2155|AAF58081.2| 1567|Drosophila melanogaster CG8370-PA
protein.
Length = 1567
Score = 27.9 bits (59), Expect = 4.0
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 200 SLIQSALFTNIVLFGVLTSFVGAVFSAAGFHVNRRGFDPQLSKSKIGPSF 349
SL +AL + FG++ V AVF A V + +D +K + P+F
Sbjct: 1046 SLKNAALVVLLASFGLV--LVAAVFDAKAIMVQQNAYDAARNKGPLQPTF 1093
>BT029428-1|ABK57085.1| 710|Drosophila melanogaster IP09654p
protein.
Length = 710
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 330 DLDS-WGSNPRRLTWNPAALNTAPTKLVKTPNNTI 229
DLD G RR T AA NT PT + P N +
Sbjct: 530 DLDQDVGQRQRRPTVRTAATNTPPTSCKRAPRNLL 564
>BT025109-1|ABE73280.1| 412|Drosophila melanogaster IP10459p
protein.
Length = 412
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 330 DLDS-WGSNPRRLTWNPAALNTAPTKLVKTPNNTI 229
DLD G RR T AA NT PT + P N +
Sbjct: 232 DLDQDVGQRQRRPTVRTAATNTPPTSCKRAPRNLL 266
>AE013599-3613|AAF47014.1| 361|Drosophila melanogaster CG13556-PA
protein.
Length = 361
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 330 DLDS-WGSNPRRLTWNPAALNTAPTKLVKTPNNTI 229
DLD G RR T AA NT PT + P N +
Sbjct: 181 DLDQDVGQRQRRPTVRTAATNTPPTSCKRAPRNLL 215
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,484,552
Number of Sequences: 53049
Number of extensions: 231811
Number of successful extensions: 498
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -