Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_O23
         (357 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   4.4  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   4.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   7.6  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 133 VHLYSAVCFFFSFLCFIYYC 192
           V  + +VC  F F+  + YC
Sbjct: 307 VDAFMSVCTVFVFMALMEYC 326


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -1

Query: 285 PAALNTAPTKLVKTPNNTI 229
           P + +T P   ++ PN T+
Sbjct: 657 PISCHTTPDSFIEAPNKTL 675


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +1

Query: 232 SIIWSFNQLCWRSV*CGRIP 291
           S +WS   +CW  +  G  P
Sbjct: 819 SDVWSMGIVCWEVMSYGERP 838


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,828
Number of Sequences: 438
Number of extensions: 1756
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8308335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)