Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_O22
(553 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3F10.12c |||transcription factor |Schizosaccharomyces pombe|... 38 0.001
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 32 0.049
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 30 0.26
SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyce... 29 0.46
SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyc... 29 0.60
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 28 0.80
SPAC664.08c |||traub transciption factor family protein |Schizos... 28 0.80
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 28 1.1
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 28 1.1
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 27 2.4
SPCC126.09 |||vacuolar membrane zinc transporter |Schizosaccharo... 27 2.4
SPCC1223.08c |dfr1||dihydrofolate reductase Dfr1|Schizosaccharom... 27 2.4
SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family |Schizos... 26 3.2
SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces pom... 26 3.2
SPBC20F10.03 |||conserved eukaryotic protein|Schizosaccharomyces... 26 3.2
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 26 4.2
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 4.2
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 25 7.4
SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyc... 25 7.4
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 25 7.4
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 25 7.4
SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces... 25 9.8
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 25 9.8
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo... 25 9.8
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 25 9.8
SPAC1B3.10c |||SEL1 repeat protein, unknown biological role|Schi... 25 9.8
SPAC22F8.09 |rrp16|nop53|rRNA processing protein Rrp16 |Schizosa... 25 9.8
>SPAC3F10.12c |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 37.5 bits (83), Expect = 0.001
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = +1
Query: 310 RREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKHSKAAVLQKSIDYIQYL 477
+R +H + E++RR+AI +G L +VP C++ +K ++LQ++ YI+ L
Sbjct: 89 KRLSHKEVERRRREAISEGIKELANIVPGCEK--------NKGSILQRTAQYIRSL 136
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 32.3 bits (70), Expect = 0.049
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +2
Query: 194 VAVGLYKTS--IKLRRLLIKIQKTKMTVEIIRHRHLVLKKGEEKLTPKQ 334
+ +G+ KT I +RR IK+ T ++ RHR VL+KG EK+ P+Q
Sbjct: 735 ILIGITKTEQDITIRRETIKLIGTLGALDPNRHR--VLEKGTEKVVPEQ 781
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 29.9 bits (64), Expect = 0.26
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = +1
Query: 166 DICNMYSRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKR 345
+I ++ GS S++ S+++ DED+ DNK ++R+ + ++ +KR
Sbjct: 222 EISDLEDWLGSDQSMETSESEEEESSESESDEDEDEDNKG---KIRKRKTDDAKKSRKKR 278
Query: 346 RDAIKKGYDSLQE 384
I Y+ +E
Sbjct: 279 APHIHIEYEQERE 291
>SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 563
Score = 29.1 bits (62), Expect = 0.46
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 196 SSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRD 351
S+G+ + QTP+S +N EDE+ K RR Q ++K+ D
Sbjct: 44 STGTESEVIQTPTSVEENNEDENSMSTTTIEIPVVK--RRNLRNQKKKKKTD 93
>SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 209
Score = 28.7 bits (61), Expect = 0.60
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 232 SSSNQNTEDEDDSGDNKASALSFKERR--REAHTQAEQKRRDAIKKGYDSLQELV 390
+S N + + DDSGD S L+ ++ + + QA QK R KK +LQ+ V
Sbjct: 99 ASHNSPSRELDDSGDENTSKLTGTKQSMLKARNRQAAQKCRIKKKKYLQTLQDQV 153
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 28.3 bits (60), Expect = 0.80
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 229 PSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVP 393
PS+ + +D DD N S+ S K + + TQA + + D + G + ++ +P
Sbjct: 87 PSTDKKKKKDNDDFKQNLKSS-SNKTEEKYSATQASKSKNDEFELGGEENEDEMP 140
>SPAC664.08c |||traub transciption factor family protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 28.3 bits (60), Expect = 0.80
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 196 SSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAI-KKGYD 372
+SGS+ + +PS + EDE+D+ S E + + + AI +K D
Sbjct: 81 NSGSLNSQSSSPSEEEDSEEDENDAVSEDHENFSSSEASSISEENEDDDQSSAIPEKDMD 140
Query: 373 SLQELV 390
L++++
Sbjct: 141 RLKKII 146
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 27.9 bits (59), Expect = 1.1
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 220 HQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQ---KRRDAIKKGYDSLQ 381
+ P N +T DED S + S+ REA++ A + +RR +DSL+
Sbjct: 974 YSNPDDKNTSTSDEDTSESEEESSNGLFSLAREANSHASKSLPQRRQIQFLDFDSLK 1030
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 27.9 bits (59), Expect = 1.1
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 211 QNIHQTPSSSNQNTEDEDDSGD--NKASALSFKERRREAHTQ 330
Q + + ++++ D DDS D NK S +S K R+ E+++Q
Sbjct: 105 QELLRQTLEADEDASDSDDSVDSSNKNSEVSIKRRKTESNSQ 146
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/79 (20%), Positives = 37/79 (46%)
Frame = +1
Query: 160 ITDICNMYSRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQ 339
+T+I + + G I+ ++ S + ++ +K + +SFK+++ E +Q+ Q
Sbjct: 916 VTEIKTLQDKIMEIGGIR--YRIQKSKVDDLHEQLKFVKDKLNKMSFKKKKNEQRSQSFQ 973
Query: 340 KRRDAIKKGYDSLQELVPT 396
+ YD+ E + T
Sbjct: 974 VELSNLTSEYDTTTESIAT 992
>SPCC126.09 |||vacuolar membrane zinc transporter
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 418
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 363 FLNGISSFLFCLGVSFSSPFFKTKCRCLIISTVIFVFCI 247
FL+ F C G+ + F T C+ I+S I FC+
Sbjct: 9 FLHLSKEFYDCCGLFLLTFFLLTTCQLRILSLSINAFCV 47
>SPCC1223.08c |dfr1||dihydrofolate reductase
Dfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 461
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 258 VFCILIRRRRSLMDVLYRPTATTPRVHVAYISD 160
VF R + D Y P TTP +H+A SD
Sbjct: 144 VFVGGFRAEKPEFDHFYNPKLTTPSLHIAGTSD 176
>SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 220 HQTPSSSNQNTEDEDDSGDNKASALS 297
+ TP S + ED+D +G NK +A S
Sbjct: 365 NNTPMSEKRKREDDDANGPNKFAARS 390
>SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 298 FKERRREAHTQAEQKRRDAIKKGYDSLQELV 390
+KE R HT + ++A++K D L +LV
Sbjct: 4 YKELARRLHTLQSKNEKEALEKQIDFLDKLV 34
>SPBC20F10.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 446
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +1
Query: 193 GSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRD 351
G SG + + S+ ++++ D+ D+ LS ERR + +QK++D
Sbjct: 378 GYSGYVAGLSSRDPDSDFDSDNVDEYIDDHKRGLSSTERRDLDRVRDKQKKQD 430
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/86 (17%), Positives = 36/86 (41%)
Frame = +2
Query: 98 LFVNGTYFNTIDKILRFQLYKSLIYATCTLGVVAVGLYKTSIKLRRLLIKIQKTKMTVEI 277
L VN + + + LY+ ++ LG+ L+ S + + + T+E+
Sbjct: 133 LEVNSSVSLENTNVCKASLYRFMLMCKNELGLTDAALFSISEIYKPSTAPLVRALQTIEL 192
Query: 278 IRHRHLVLKKGEEKLTPKQNRNEEMP 355
+ ++ V + TP + ++ +P
Sbjct: 193 LLKKYEVSNTTKSSSTPSPSTDDNVP 218
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/64 (23%), Positives = 28/64 (43%)
Frame = +1
Query: 184 SRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKK 363
+R SS I + TPSSS+ ++ S +K+S+ S + +++ + K
Sbjct: 139 TRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKS 198
Query: 364 GYDS 375
S
Sbjct: 199 SSSS 202
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 212 KTSIKLRRLLIKIQKTKMTVEIIRHRHLVLKKGEEKLTPKQN 337
KT ++ RL +++KTK E+ H++ ++T KQN
Sbjct: 755 KTVLEQHRLS-EMRKTKKQTELTNSAHVIKPSPTPQITVKQN 795
>SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 227 LRRLLIKIQKTKMTVEI 277
+R LLI++QKTK+ VE+
Sbjct: 419 VRTLLIQLQKTKVDVEV 435
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 241 NQNTEDEDDSGDNKASALSFKERRRE----AHTQAEQKRRDAIKKG 366
N E+E++ G+ K A + KER + + Q+RR+ KG
Sbjct: 294 NGGEEEEEEEGEEKEDAQNIKERMVDFCFSKFMEKNQQRREQQDKG 339
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 241 NQNTEDEDDSGDNKASALSFKERRRE----AHTQAEQKRRDAIKKG 366
N E+E++ G+ K A + KER + + Q+RR+ KG
Sbjct: 294 NGGEEEEEEEGEEKEDAQNIKERMVDFCFSKFMEKNQQRREQQDKG 339
>SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1441
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 323 TPKQNRNEEMPLRKDMIHFKSWFLPVNKLMHQAISTVK 436
+P+Q +PLRKD + F L + + I+T++
Sbjct: 251 SPEQTSTVTLPLRKDTVLFSLVTLDLEQRASAVITTIQ 288
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 24.6 bits (51), Expect = 9.8
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 247 NTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASG 420
N ++ D+S K L KER E E++RRD +K +D+ + + ++ SG
Sbjct: 303 NAKELDESRRKKIELLEKKERDEEQF--LEKERRDTARK-WDNQGDFIRNMRKEIYSG 357
>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 963
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 226 TPSSSNQNTEDEDDSGDNKASALSFKE 306
+P SN++ +DD D AS + KE
Sbjct: 230 SPEESNESEFIDDDESDEVASIIDIKE 256
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 24.6 bits (51), Expect = 9.8
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 13/85 (15%)
Frame = +1
Query: 310 RREAHTQAEQKRRDAIKKGYDSLQELVPTCQ----QTDAS---------GYKHSKAAVLQ 450
+R AH E++ R + L++ VPT + T A K +KA +L
Sbjct: 427 KRSAHNMIEKRYRSNLNDKIAELRDAVPTLRSGYNSTTADELKGTYVPLSRKLNKATILS 486
Query: 451 KSIDYIQYLLQQXXXXXXXXNALQK 525
K+ +YI+ L + LQK
Sbjct: 487 KATEYIKSLQSKNKKLIEENKILQK 511
>SPAC1B3.10c |||SEL1 repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 680
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 6 EVDTY-YYNDIILFFITYLGKMGYAKKNLLIFFL*MERTLIQ*IRFYVFNF 155
E+D Y Y+++ ++++ Y +MGYA + +L E + F FN+
Sbjct: 489 EIDEYGYFHNSFVYYL-YAAQMGYALAEINAAYLMDENKFLINSVFRYFNY 538
>SPAC22F8.09 |rrp16|nop53|rRNA processing protein Rrp16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 419
Score = 24.6 bits (51), Expect = 9.8
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Frame = +1
Query: 214 NIHQTPSSSNQNTEDEDDSGDNKASALS----FKERRREAHTQAEQKRRDAIKKGYDSLQ 381
+I S ++ E S NK S ++RR E EQK+ + + + D
Sbjct: 249 SIDSDDQSEHEQAETPIPSSKNKRKTRSQRNKIRQRREEELRLLEQKKNEELLRTIDKAP 308
Query: 382 ELVPTCQQTDASGYKHSKA 438
+ QQ D + +KA
Sbjct: 309 AISKKLQQKDKAEKFSNKA 327
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,217,471
Number of Sequences: 5004
Number of extensions: 44753
Number of successful extensions: 217
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -