Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_O19
(501 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10) 42 4e-04
SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.043
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.10
SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05) 32 0.23
SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.93
SB_49875| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_31410| Best HMM Match : PDZ (HMM E-Value=1.1e-15) 29 1.6
SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05) 29 1.6
SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_25411| Best HMM Match : CDO_I (HMM E-Value=8.6e-06) 28 5.0
SB_41668| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_397| Best HMM Match : MFS_1 (HMM E-Value=0.16) 27 6.6
SB_22037| Best HMM Match : Xan_ur_permease (HMM E-Value=2e-07) 27 6.6
SB_20662| Best HMM Match : bZIP_1 (HMM E-Value=0.89) 27 6.6
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_3686| Best HMM Match : Myotub-related (HMM E-Value=2.8e-08) 27 8.7
SB_32401| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-10) 27 8.7
>SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10)
Length = 172
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 189 KTALCFAXLVNTIQEGSVKKVNQSTMAFKCMENINAFLEAVKKLGVPPPGNFPD-DRFVG 365
K+ + L N IQ G++KK+N + M F MENI F V+ GV F D F G
Sbjct: 95 KSGVVLCKLANAIQPGAIKKINNAKMNFMMMENIENFCNFVQTKGVASQYQFVTIDLFEG 154
Query: 366 E 368
+
Sbjct: 155 K 155
>SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 38.3 bits (85), Expect = 0.004
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 246 KVNQSTMAFKCMENINAFLEAVKKLGVPPPGNFPD-DRFVGETEPLLCR--HLLGNRWAG 416
K+N S MAFK MEN FLE +GVP F D + + P + H LG +
Sbjct: 116 KINSSKMAFKMMENTGKFLEFCDTIGVPKTDMFQTVDLYEKQNMPGVINGIHALGRKAHS 175
Query: 417 RRLTTVNRPIGPKE 458
T + +GPKE
Sbjct: 176 TGKTCL--ALGPKE 187
>SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 34.7 bits (76), Expect = 0.043
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 337 ETFQTIDLWERQNLYSVVTCLAIVGQEGV*LR*TV-QSVPRNRQEYSRFF--RRTTEG 501
+ FQT+DL+E+ N+++V+ C+ VG+ L V Q P+ + R F R+ EG
Sbjct: 511 DLFQTVDLYEKSNMWNVICCIHAVGRRAYSLGKDVPQLGPKESTKNPRQFTERQLNEG 568
Score = 32.3 bits (70), Expect = 0.23
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +3
Query: 234 GSVKKVNQSTMAFKCMENINAFLEAVK-KLGVPPPGNFPDDRFVGET---EPLLCRHLLG 401
G K+NQ M FK MENI FL ++ LGV F ++ + C H +G
Sbjct: 476 GGDLKINQQKMPFKQMENIGNFLSFIENNLGVAKNDLFQTVDLYEKSNMWNVICCIHAVG 535
Query: 402 NRWAGRRLTTVNRPIGPKEPTR 467
R L +GPKE T+
Sbjct: 536 RR--AYSLGKDVPQLGPKESTK 555
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.5 bits (73), Expect = 0.10
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 325 CRPQETFQTIDLWERQNLYSVVT 393
C PQ+ FQT+ L+ERQNL V++
Sbjct: 915 CNPQDLFQTVYLFERQNLGQVIS 937
>SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 33.1 bits (72), Expect = 0.13
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 46 GINAEAQARIHSKYNDEVAHETLEWIRKLTGE 141
G+ AE +I SKY+ E+ + +W+ K+ GE
Sbjct: 16 GLTAEVNRKIQSKYDTELEMQCRDWLEKMLGE 47
Score = 29.1 bits (62), Expect = 2.2
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = +3
Query: 189 KTALCFAXLVNTIQEGSVKKVNQSTMAFKCMENINAFLEAVKKL 320
++ + + N I+ ++ K+ +S +F ENI+ FL+ +++
Sbjct: 310 RSGVILCKIANKIKSNAIPKIGESNKSFVMQENISKFLDFCERV 353
>SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 33.1 bits (72), Expect = 0.13
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 7/45 (15%)
Frame = +3
Query: 213 LVNTIQEGSVKKVN-------QSTMAFKCMENINAFLEAVKKLGV 326
LVN+ +G++ ++ + TM KCM+N++ FLEA KKLGV
Sbjct: 345 LVNSAYKGTIPSIHIPSAGVPKLTMT-KCMKNVDYFLEACKKLGV 388
>SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05)
Length = 195
Score = 32.3 bits (70), Expect = 0.23
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 225 IQEGSVKKVNQSTMAFKCMENINAFLEAVKKLGVPPPGNF 344
I+ G+ KVN+ M FK MENI FL LGV F
Sbjct: 67 IKLGAKIKVNEQNMPFKQMENIGNFLSHCGHLGVASGDQF 106
>SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 30.3 bits (65), Expect = 0.93
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -3
Query: 448 PIGRFTVVRRLPAQRLPSK*RQSKGSVSPTNRSSGKFPGGGTPN 317
P GR RRLP+ RLPS+ R G + SG+ P G P+
Sbjct: 266 PSGRLPS-RRLPSGRLPSR-RLPSGRLPSRRLPSGRLPSGRLPS 307
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 424 RRLPAQRLPSK*RQSKGSVSPTNR-SSGKFPGGGTPN 317
RRLP++RLPS S+ P+ R SG+ P P+
Sbjct: 171 RRLPSRRLPSGCLPSRRGQLPSRRLPSGRLPSRRLPS 207
>SB_49875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 456
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 149 TQTGRPTTLYEILKDGTLLCXAREHDSRG 235
T G PTT+ +LKD TL+ E DS G
Sbjct: 385 TAVGHPTTMEVLLKDPTLVPFLTEKDSSG 413
>SB_31410| Best HMM Match : PDZ (HMM E-Value=1.1e-15)
Length = 556
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 182 ILKDGTLLCXAREHDSRGISQEGQPV 259
IL DGT++ ++EH SR +SQ PV
Sbjct: 270 ILPDGTVVRESKEHFSRSLSQPPSPV 295
>SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05)
Length = 819
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 46 GINAEAQARIHSKYNDEVAHETLEWIRKLTGE 141
G+ AE ++ +KY+ + E ++WI K+ GE
Sbjct: 667 GMTAELSRKMSAKYDPVMDAEAVDWIEKVLGE 698
>SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1356
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 25 EYRAGKAGINAEAQARIHSKYNDEVAHETLEWIRKLTGEPANT 153
+Y+ G+ +NA+A +RIH +Y + VA + E +T EP+ T
Sbjct: 774 KYKPGRHNVNADALSRIH-RYEETVAAISAE----VTYEPSTT 811
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 340 FPGGGTPNFLTASKNALMFSMHLKAIVDWLTFLTD 236
FPGGGT + MF K + D++ +TD
Sbjct: 1987 FPGGGTDTAAALNATLAMFDAGRKGVKDFVVLVTD 2021
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 52 NAEAQARIHSKYNDEVAHETLEWIRKLTGEPANTDGSAD 168
NAE+ A +++ ++ + HE E++ +L + DG D
Sbjct: 270 NAESYATVNTYVSNHITHEGAEYLSELLYDGDGVDGDGD 308
>SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1888
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 427 VRRLPAQRLPSK*RQSKGSVSPT-NRSSGKFPGGGT 323
++R P R R ++G V+ T NR SGK PG T
Sbjct: 816 IQRNPGSRAGHTGRGNEGDVAATTNRDSGKHPGEST 851
>SB_25411| Best HMM Match : CDO_I (HMM E-Value=8.6e-06)
Length = 229
Score = 27.9 bits (59), Expect = 5.0
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +3
Query: 213 LVNTIQE--GSVKKVNQSTMAFKCMENI---NAFLEAVKKLGVPPPGNFPDDRFVGETEP 377
LV IQ+ ++ K+ Q TM + + + A A+K++G P R VGET
Sbjct: 67 LVLGIQQKPNAIFKIFQKTMPTRLLSSAILTTAIYAAIKRIGEKPRVVGETSRIVGETSR 126
Query: 378 LLCRHLLGNRWAGRRLTTVNRPIGPK 455
++ ++G R T + R I PK
Sbjct: 127 VVGEPVVGEP-VCREQTAIPRRICPK 151
>SB_41668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 588
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = -3
Query: 436 FTVVRRLPAQRLPSK*RQSKGSVSPTNRSSGKFPGGGTPNFLTASKNALMFSM 278
FT+VRR+P R+ RQ++ S + ++ +S G T + ++ N+ F+M
Sbjct: 352 FTMVRRIPTSRV----RQTRLSFTMSSSNSTFLYYGKTNTYFSSPSNSTSFTM 400
>SB_397| Best HMM Match : MFS_1 (HMM E-Value=0.16)
Length = 394
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -1
Query: 180 SYKVVGRPVCVSRFA-GQFPDPFESFMRYFIVVFAVDSRLCFGVDSSFASAIF 25
S+KV PV +F +F DP M+ FIV A +CFG + IF
Sbjct: 216 SHKVCQAPVVKLKFKISRFIDPRPWKMKPFIVFSACMCCICFGYFVPYVHLIF 268
>SB_22037| Best HMM Match : Xan_ur_permease (HMM E-Value=2e-07)
Length = 445
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 279 MENINAFLEAVKKLGVPPPGNFPDDRFVGETEPLLCRHLLGNRW-AGRRLTTVNRPIGPK 455
+E+I + + G PPP +R +G E + C L+ W +G T+ ++ IG
Sbjct: 137 IESIGDYYACARLCGAPPPPKHAVNRGIG-MEGIGC--LITGLWGSGNGTTSYSQNIGAL 193
Query: 456 EPTRIFEIFQKN 491
T++ +I+ ++
Sbjct: 194 GITKVAKIYDRS 205
>SB_20662| Best HMM Match : bZIP_1 (HMM E-Value=0.89)
Length = 589
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 213 LVNTIQEGSVKKVNQSTMAFKCMENINAFLEAVKK 317
L+N QE + K V+++ +FK +EN N L ++ K
Sbjct: 101 LLNNAQEDAKKPVSENMESFKRIENENEHLRSLLK 135
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 213 LVNTIQEGSVKKVNQSTMAFKCMENINAFLEAVKK 317
L+N QE + K V+++ +FK +EN N L ++ K
Sbjct: 3207 LLNNAQEDAKKPVSENMESFKRIENENEHLRSLLK 3241
>SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1569
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +3
Query: 273 KCMENINAFLEAVKKLGVPPPGNFPDDRFVGETEPLLC 386
K N N + + V +LG+ PG+ F G L C
Sbjct: 86 KLETNQNYYQDTVNELGILIPGSLSSSMFTGSDNKLCC 123
>SB_3686| Best HMM Match : Myotub-related (HMM E-Value=2.8e-08)
Length = 629
Score = 27.1 bits (57), Expect = 8.7
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +3
Query: 219 NTIQEGSVKKVNQSTMAFKCMENINAFLEAVKKLGVPPPGNFPDDRFVGETEPL---LCR 389
NT+Q S+++ NQ T I A A+++ P N+ V T+P L
Sbjct: 547 NTVQRDSLQE-NQ-TQVGNAQNPIMANYSALQQ--TPANVNYGHQTLVVRTQPSAPPLTD 602
Query: 390 HLLGNRWAGRRLTTVNRPIGPKEP 461
H + + +A T N P+GP P
Sbjct: 603 HQMEHAFASYHPTVFNTPLGPPPP 626
>SB_32401| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-10)
Length = 269
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Frame = +2
Query: 17 KWPNIALA------KLESTPKHRRESTANTTMK*RMKLSNGSGN 130
K PN+A A K+ PK S+ + TM +M+ SNG+GN
Sbjct: 122 KLPNLATASQPVLLKIIPAPKTIAPSSTDVTMVTQMETSNGTGN 165
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,108,473
Number of Sequences: 59808
Number of extensions: 374504
Number of successful extensions: 928
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1087245449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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