Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_O19
(501 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 66 1e-11
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 66 1e-11
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 52 2e-07
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 51 4e-07
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 33 0.15
Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical pr... 29 2.5
U00036-9|AAK29852.1| 377|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z35597-4|CAA84647.2| 548|Caenorhabditis elegans Hypothetical pr... 28 4.4
AC006644-3|AAF39838.2| 491|Caenorhabditis elegans Hypothetical ... 27 5.8
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z30973-2|CAA83221.2| 163|Caenorhabditis elegans Hypothetical pr... 27 7.6
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 66.5 bits (155), Expect = 1e-11
Identities = 37/129 (28%), Positives = 65/129 (50%)
Frame = +1
Query: 31 RAGKAGINAEAQARIHSKYNDEVAHETLEWIRKLTGEPANTDGSADNFVRDIKRRHSALX 210
RA K+GI EAQ +I+ KY+ +A E L+W++ +TG+ +T G ADN V+ + +L
Sbjct: 9 RAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVF--QDGSLL 66
Query: 211 SS*TRFKRDQXXXXXXXXXXXXXXXXXMRFWKRLKSWACRPQETFQTIDLWERQNLYSVV 390
+ + + F+ + + E FQT+DL+E Q+ +V+
Sbjct: 67 CTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEYVQKSELFQTVDLYEGQDPNAVL 126
Query: 391 TCLAIVGQE 417
CLA + ++
Sbjct: 127 ICLASLARK 135
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 66.5 bits (155), Expect = 1e-11
Identities = 37/129 (28%), Positives = 65/129 (50%)
Frame = +1
Query: 31 RAGKAGINAEAQARIHSKYNDEVAHETLEWIRKLTGEPANTDGSADNFVRDIKRRHSALX 210
RA K+GI EAQ +I+ KY+ +A E L+W++ +TG+ +T G ADN V+ + +L
Sbjct: 9 RAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVF--QDGSLL 66
Query: 211 SS*TRFKRDQXXXXXXXXXXXXXXXXXMRFWKRLKSWACRPQETFQTIDLWERQNLYSVV 390
+ + + F+ + + E FQT+DL+E Q+ +V+
Sbjct: 67 CTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEYVQKSELFQTVDLYEGQDPNAVL 126
Query: 391 TCLAIVGQE 417
CLA + ++
Sbjct: 127 ICLASLARK 135
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 52.0 bits (119), Expect = 2e-07
Identities = 27/51 (52%), Positives = 31/51 (60%)
Frame = +3
Query: 192 TALCFAXLVNTIQEGSVKKVNQSTMAFKCMENINAFLEAVKKLGVPPPGNF 344
T LC A N I+ GS+KKV + F CMENINAF+E KK GVP F
Sbjct: 59 TLLCKAA--NGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVPNEETF 107
Score = 49.2 bits (112), Expect = 2e-06
Identities = 34/128 (26%), Positives = 57/128 (44%)
Frame = +1
Query: 31 RAGKAGINAEAQARIHSKYNDEVAHETLEWIRKLTGEPANTDGSADNFVRDIKRRHSALX 210
R GI + + SK+ D+ A LEWI+KL+GE +T G DNF ++ + + L
Sbjct: 4 RTTAGGIGFAVRQKQDSKFIDKEATLLLEWIKKLSGENISTSGERDNF-HNLLKDGTLLC 62
Query: 211 SS*TRFKRDQXXXXXXXXXXXXXXXXXMRFWKRLKSWACRPQETFQTIDLWERQNLYSVV 390
+ + F + K +ETFQ+++L E ++L+SV
Sbjct: 63 KAANGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVPNEETFQSVELVEGRDLFSVC 122
Query: 391 TCLAIVGQ 414
L +G+
Sbjct: 123 VTLLSLGR 130
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 51.2 bits (117), Expect = 4e-07
Identities = 38/122 (31%), Positives = 54/122 (44%)
Frame = +1
Query: 34 AGKAGINAEAQARIHSKYNDEVAHETLEWIRKLTGEPANTDGSADNFVRDIKRRHSALXS 213
AG AG + QA SK+ND A LEWIR LT E + + S DNF +K L
Sbjct: 11 AGMAGAILDKQA---SKFNDVEAGYLLEWIRDLTKEDFDCEASRDNFREQLKDGQR-LCK 66
Query: 214 S*TRFKRDQXXXXXXXXXXXXXXXXXMRFWKRLKSWACRPQETFQTIDLWERQNLYSVVT 393
K +F +S + +ETFQ++DL++ ++L+SV
Sbjct: 67 LVNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDEETFQSVDLFDGRDLFSVTV 126
Query: 394 CL 399
L
Sbjct: 127 TL 128
Score = 44.8 bits (101), Expect = 4e-05
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 213 LVNTIQEGSVKKVNQSTMAFKCMENINAFLEAVKKLGVPPPGNFPD-DRFVG 365
LVN I+ GSVKK+ + F C+ENIN F A + LGV F D F G
Sbjct: 67 LVNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDEETFQSVDLFDG 118
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 32.7 bits (71), Expect = 0.15
Identities = 28/125 (22%), Positives = 48/125 (38%), Gaps = 4/125 (3%)
Frame = +1
Query: 46 GINAEAQARIHSKYNDEVAHETLEWIRKLTGEPANTDGSADNFVRDIKRR-HSALXSS*T 222
G++ E Q + +++ E A E L+WI +TGE + D + D+ +
Sbjct: 9 GLSRELQKKNDARFVLEEAIEVLKWIENVTGERFSFDVTTCESSTDVSNLLKDGVMLCKL 68
Query: 223 RFKRD---QXXXXXXXXXXXXXXXXXMRFWKRLKSWACRPQETFQTIDLWERQNLYSVVT 393
K D + F K + FQT+DL+E + Y V+
Sbjct: 69 IEKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDLYENKQCYKVIE 128
Query: 394 CLAIV 408
CL ++
Sbjct: 129 CLRLL 133
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 264 MAFKCMENINAFLEAVKKLGV 326
MAF MENI+ FL A K+ GV
Sbjct: 86 MAFPMMENISNFLAAAKQFGV 106
>Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical
protein F52B11.3 protein.
Length = 741
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 498 FSCSSEKSRIFLSVPWDRLDGLP 430
F CSS ++ F+ +P RLDG P
Sbjct: 19 FECSSHETTAFVRIPRARLDGTP 41
>U00036-9|AAK29852.1| 377|Caenorhabditis elegans Hypothetical
protein R151.1 protein.
Length = 377
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -1
Query: 180 SYKVVGRPVCVSRFAGQFPDPFE--SFMRYFIVVFAVDSRLCFGVD 49
SY++ + S Q+ PF+ F +Y I +FAVD C D
Sbjct: 188 SYEISAKSAETSAHTYQYQLPFQFTPFQQYKISIFAVDDSFCHNQD 233
>Z35597-4|CAA84647.2| 548|Caenorhabditis elegans Hypothetical
protein C36E8.4 protein.
Length = 548
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 58 EAQARIHSKYNDEVAHETLEWIRKLTGEPANTDGSADNFV-RDIKR 192
+ A IHS + + ++ +R + T +ADNFV R+I++
Sbjct: 118 DIHATIHSNLGSAITEDIIQPLRSIQSNQQKTIRAADNFVEREIRK 163
>AC006644-3|AAF39838.2| 491|Caenorhabditis elegans Hypothetical
protein F55A3.7 protein.
Length = 491
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = -1
Query: 231 LESCSRAXQSRVPSFNISYKVVGRPVCVSRFAGQFPDPFESFMRYF 94
+++CS++ + + I++ G V + +GQFP P +M+ F
Sbjct: 268 IKNCSQSVEGDLTYLRINFATPGSQV--GKDSGQFPHPLAHYMKEF 311
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 248 GQPVDDGFQVHGEHQCVFGSG 310
GQP+D GF V EH+ + +G
Sbjct: 919 GQPIDVGFGVLSEHRWAYSAG 939
>Z30973-2|CAA83221.2| 163|Caenorhabditis elegans Hypothetical
protein B0284.3 protein.
Length = 163
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 84 FAVDSRLCFGVDSSFASAIF 25
F + LCF +DSSF AIF
Sbjct: 43 FQLTHSLCFSIDSSFVFAIF 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,536,585
Number of Sequences: 27780
Number of extensions: 272961
Number of successful extensions: 815
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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