Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_O18
(227 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6R4K4 Cluster: Pre-mRNA processing splicing factor 8; ... 160 5e-39
UniRef50_Q6P2Q9 Cluster: Pre-mRNA-processing-splicing factor 8; ... 160 5e-39
UniRef50_Q8I1X5 Cluster: Pre-mRNA splicing factor, putative; n=1... 151 4e-36
UniRef50_A4IBT3 Cluster: PRP8 protein homologue, putative; n=8; ... 65 3e-10
UniRef50_Q7QTZ9 Cluster: GLP_169_4270_455; n=1; Giardia lamblia ... 61 5e-09
UniRef50_A5E0E9 Cluster: Putative uncharacterized protein; n=1; ... 45 3e-04
UniRef50_A0P0F7 Cluster: Methyl-accepting chemotaxis sensory tra... 34 0.54
UniRef50_Q9AW36 Cluster: Splicing factor Prp8; n=1; Guillardia t... 33 1.2
UniRef50_Q48KE7 Cluster: GtrC, putative; n=1; Pseudomonas syring... 31 3.8
UniRef50_Q560T9 Cluster: Putative uncharacterized protein; n=3; ... 31 5.0
UniRef50_Q5YER8 Cluster: Coronin; n=1; Bigelowiella natans|Rep: ... 30 8.8
UniRef50_A2X7K3 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
>UniRef50_A6R4K4 Cluster: Pre-mRNA processing splicing factor 8; n=1;
Ajellomyces capsulatus NAm1|Rep: Pre-mRNA processing
splicing factor 8 - Ajellomyces capsulatus NAm1
Length = 2739
Score = 160 bits (389), Expect = 5e-39
Identities = 75/75 (100%), Positives = 75/75 (100%)
Frame = +2
Query: 2 YRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEV 181
YRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEV
Sbjct: 2189 YRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEV 2248
Query: 182 AALIRSLPVEEQPKQ 226
AALIRSLPVEEQPKQ
Sbjct: 2249 AALIRSLPVEEQPKQ 2263
>UniRef50_Q6P2Q9 Cluster: Pre-mRNA-processing-splicing factor 8;
n=106; Eukaryota|Rep: Pre-mRNA-processing-splicing factor
8 - Homo sapiens (Human)
Length = 2335
Score = 160 bits (389), Expect = 5e-39
Identities = 75/75 (100%), Positives = 75/75 (100%)
Frame = +2
Query: 2 YRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEV 181
YRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEV
Sbjct: 1786 YRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEV 1845
Query: 182 AALIRSLPVEEQPKQ 226
AALIRSLPVEEQPKQ
Sbjct: 1846 AALIRSLPVEEQPKQ 1860
>UniRef50_Q8I1X5 Cluster: Pre-mRNA splicing factor, putative; n=1;
Plasmodium falciparum 3D7|Rep: Pre-mRNA splicing factor,
putative - Plasmodium falciparum (isolate 3D7)
Length = 3136
Score = 151 bits (365), Expect = 4e-36
Identities = 69/75 (92%), Positives = 72/75 (96%)
Frame = +2
Query: 2 YRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEV 181
YRVTIHKTFEGNLTTKPINGAIFI NP+TGQLFLKIIHTSVW GQKRL QLAKWKTAEEV
Sbjct: 2483 YRVTIHKTFEGNLTTKPINGAIFILNPKTGQLFLKIIHTSVWIGQKRLSQLAKWKTAEEV 2542
Query: 182 AALIRSLPVEEQPKQ 226
A+LIRSLP+EEQPKQ
Sbjct: 2543 ASLIRSLPIEEQPKQ 2557
>UniRef50_A4IBT3 Cluster: PRP8 protein homologue, putative; n=8;
Trypanosomatidae|Rep: PRP8 protein homologue, putative -
Leishmania infantum
Length = 2427
Score = 65.3 bits (152), Expect = 3e-10
Identities = 30/75 (40%), Positives = 47/75 (62%)
Frame = +2
Query: 2 YRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEV 181
Y + T +G K NGA+ +F P +G L + ++H SV++GQKR +LA+ K AEE+
Sbjct: 1861 YVTSEQPTPDGGKKFKSENGAVLVFEPVSGSLKMSVVHRSVFSGQKRRSKLAREKAAEEI 1920
Query: 182 AALIRSLPVEEQPKQ 226
A+ +RS P E+P +
Sbjct: 1921 ASWLRSCPPSERPSK 1935
>UniRef50_Q7QTZ9 Cluster: GLP_169_4270_455; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_169_4270_455 - Giardia lamblia ATCC
50803
Length = 1271
Score = 60.9 bits (141), Expect = 5e-09
Identities = 26/56 (46%), Positives = 37/56 (66%)
Frame = +2
Query: 53 INGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQP 220
ING I IFNP+TG+L L ++H +AGQ R L++W+TA+ + I SLP +P
Sbjct: 680 INGFISIFNPQTGRLVLSVVHADTYAGQSRRASLSRWRTADLLTGYISSLPQALRP 735
>UniRef50_A5E0E9 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 150
Score = 45.2 bits (102), Expect = 3e-04
Identities = 24/75 (32%), Positives = 43/75 (57%)
Frame = -2
Query: 226 LFGLLFNWQ*AN*SSHFFSGLPFRELS*TLLTGPYTRMNDLEEQLSSSGVEYEYSTVDRL 47
LF L F Q S FF LPF +L+ +LL+ PY + + ++QL+ ++ +++T+ R
Sbjct: 31 LFRLFFTGQRLEQCSDFFCSLPFGKLTQSLLSSPYRGVYNSQKQLTRFWIKDKHTTIYRF 90
Query: 46 RS*ITLECLVDRHSV 2
IT +C ++ +V
Sbjct: 91 GCQITFQCFMNSDTV 105
>UniRef50_A0P0F7 Cluster: Methyl-accepting chemotaxis sensory
transducer with Pas/Pac sensor; n=1; Stappia aggregata
IAM 12614|Rep: Methyl-accepting chemotaxis sensory
transducer with Pas/Pac sensor - Stappia aggregata IAM
12614
Length = 490
Score = 34.3 bits (75), Expect = 0.54
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 83 RTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEE 178
+ GQ ++ VW+G+KR+G + +W AEE
Sbjct: 91 KIGQKSFDLVANHVWSGKKRIGTVVEWANAEE 122
>UniRef50_Q9AW36 Cluster: Splicing factor Prp8; n=1; Guillardia
theta|Rep: Splicing factor Prp8 - Guillardia theta
(Cryptomonas phi)
Length = 2057
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +2
Query: 56 NGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQP 220
+G +FIFNP G +++K ++ S + +K +K E+ +++ P E P
Sbjct: 1623 SGFLFIFNPINGLIYIKNLNCSKFNNKKNFKDFSKIFLGNELVNFLKTCPKFELP 1677
>UniRef50_Q48KE7 Cluster: GtrC, putative; n=1; Pseudomonas syringae
pv. phaseolicola 1448A|Rep: GtrC, putative - Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
Length = 500
Score = 31.5 bits (68), Expect = 3.8
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 65 IFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVE 211
+FI P G L L ++ +V + QK LGQ A ++ AL +S +E
Sbjct: 355 LFIVLPLAGMLSLSFVYGNVLSAQKELGQHVARSIAYDIDALSQSRTLE 403
>UniRef50_Q560T9 Cluster: Putative uncharacterized protein; n=3;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 7 SDDPQDIRG*FNYEAYQRCYIHIQPQNWTIVPQDHS 114
S DPQD++G AY+ IQP+N+T++ +++
Sbjct: 127 SSDPQDVKGCAIGIAYESNVAKIQPENFTVISVNYT 162
>UniRef50_Q5YER8 Cluster: Coronin; n=1; Bigelowiella natans|Rep:
Coronin - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 426
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 80 PRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ 217
PR QLF K ++ + +AG L A+W + E A + RS+ + Q
Sbjct: 344 PRKSQLFAKDLYPAAYAGVPSLAG-AEWLSGENKAPVTRSMDPKNQ 388
>UniRef50_A2X7K3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 386
Score = 30.3 bits (65), Expect = 8.8
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +2
Query: 56 NGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ 226
N +F +PR Q + ++ RLG A+ K AEE+ + V EQ KQ
Sbjct: 57 NNRLFARDPRHLQFEADVNRLFLYTSYYRLGANAEEKDAEEIIDMASKASVSEQQKQ 113
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,350,717
Number of Sequences: 1657284
Number of extensions: 4052639
Number of successful extensions: 11349
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11348
length of database: 575,637,011
effective HSP length: 54
effective length of database: 486,143,675
effective search space used: 10209017175
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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