Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_O18
(227 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40492| Best HMM Match : PROCN (HMM E-Value=0) 145 6e-36
SB_19769| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.59
SB_13379| Best HMM Match : WD40 (HMM E-Value=1.3e-39) 24 1.7
SB_8973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.8
SB_1080| Best HMM Match : Desmo_N (HMM E-Value=4.8) 27 2.4
SB_6952| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.2
SB_48059| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_49377| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_20607| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_37932| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.3
SB_54614| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-38) 25 9.7
>SB_40492| Best HMM Match : PROCN (HMM E-Value=0)
Length = 1784
Score = 145 bits (351), Expect = 6e-36
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = +2
Query: 23 TFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSL 202
TFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSL
Sbjct: 1684 TFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSL 1743
Query: 203 PVEEQPKQ 226
PVEEQPKQ
Sbjct: 1744 PVEEQPKQ 1751
>SB_19769| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 69
Score = 29.1 bits (62), Expect = 0.59
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 100 PQDHSYECMGRSEASRTAREMEDR*RSGCSNSL 198
P +H+Y MG +A A++ R R+ C N++
Sbjct: 35 PSEHTYRAMGSKDAVGRAKKNAGRLRTHCKNAI 67
>SB_13379| Best HMM Match : WD40 (HMM E-Value=1.3e-39)
Length = 574
Score = 23.8 bits (49), Expect(2) = 1.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 56 NGAIFIFNPRTGQLFLKI 109
+G I +F P +GQLF +I
Sbjct: 239 DGKIRVFRPESGQLFYEI 256
Score = 22.2 bits (45), Expect(2) = 1.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 122 VWAGQKRLGQLAKWKTAEE 178
VW G+K LG + + K E+
Sbjct: 287 VWEGKKLLGMMKEHKAVEK 305
>SB_8973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -3
Query: 105 LRNNCPVLGLNMNIAPLIGFVVKLPSNVLWIVTRY 1
+R+ +L LNM I+ L+ V +P + W++ Y
Sbjct: 63 MRSTRNLLILNMAISDLLSSVFNIPDQIRWLILGY 97
>SB_1080| Best HMM Match : Desmo_N (HMM E-Value=4.8)
Length = 364
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
++G++ +K ++ + NP G + K +HT G +A KT V LI
Sbjct: 73 YKGDMASKTVHTVRLLINPYKGDMACKTVHTVRLLINPYKGDMAS-KTVHTVRLLI 127
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
++G++++K ++ + NP G + K +HT G +A KT V LI
Sbjct: 301 YKGDMSSKTVHTVRLLINPYKGDMASKTVHTVRLLINPYRGDMAS-KTVHTVRLLI 355
Score = 26.6 bits (56), Expect = 3.2
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
++G++ +K ++ + NP G + K +HT G +A KT V LI
Sbjct: 16 YKGDMASKTVHTVRLLINPYKGDMASKTVHTVRLLINPYRGDMAS-KTVHTVRLLI 70
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
++G++ +K ++ + NP G + K +HT G +A KT V LI
Sbjct: 111 YKGDMASKTVHTVRLLINPYKGDMACKTVHTVRLLINPYKGDMA-CKTVHTVRLLI 165
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
++G++ K ++ + NP G + K +HT G +A KT V LI
Sbjct: 149 YKGDMACKTVHTVRLLINPYRGDMASKTVHTVRLLINPYKGDMAS-KTVHTVRLLI 203
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
+ G+L K ++ + NP G + K +HT G +A KT V LI
Sbjct: 282 YRGDLACKTLHTVRLLINPYKGDMSSKTVHTVRLLINPYKGDMAS-KTVHTVRLLI 336
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
+ G++ +K ++ + NP G + K +HT G +A KT V LI
Sbjct: 54 YRGDMASKTVHTVRLLINPYKGDMASKTVHTVRLLINPYKGDMA-CKTVHTVRLLI 108
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
+ G++ K ++ + NP G + K +HT G LA KT V LI
Sbjct: 244 YRGDMACKTVHTVRLLINPYKGDMACKTVHTVRLPINPYRGDLA-CKTLHTVRLLI 298
>SB_6952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 26.6 bits (56), Expect = 3.2
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
++G++ +K ++ + NP G + K +HT G +A KT V LI
Sbjct: 16 YKGDMASKTVHTVRLLINPYKGDMASKTVHTVRLLINPYRGDMAS-KTVHTVRLLI 70
Score = 26.6 bits (56), Expect = 3.2
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
+ G++ +K ++ + NP G + K +HT G +A KT V LI
Sbjct: 225 YRGDMASKTVHTVRLLINPYRGDMACKTVHTVRLLINPYRGDMAS-KTVHTVRLLI 279
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
+ G++ +K ++ + NP G + K +HT G +A KT V LI
Sbjct: 187 YRGDMASKTVHTVRLLINPYRGDMASKTVHTVRLLINPYRGDMAS-KTVHTVRLLI 241
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
+ G++ +K ++ + NP G + K +HT G +A KT V LI
Sbjct: 73 YRGDMASKTVHTVRLLINPYRGDMACKTVHTVRLLINPYRGDMA-CKTVHTVRLLI 127
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
+ G++ K ++ + NP G + K +HT G +A KT V LI
Sbjct: 149 YRGDMACKTVHTVRLLINPYRGDMACKTVHTVRLLINPYRGDMAS-KTVHTVRLLI 203
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSV 124
+ G++ +K ++ + NP G + K +HT V
Sbjct: 263 YRGDMASKTVHTVRLLINPYKGDMASKTVHTVV 295
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
+ G++ +K ++ + NP G + K +HT G +A KT V LI
Sbjct: 54 YRGDMASKTVHTVRLLINPYRGDMASKTVHTVRLLINPYRGDMA-CKTVHTVRLLI 108
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
+ G++ K ++ + NP G + K +HT G +A KT V LI
Sbjct: 111 YRGDMACKTVHTVRLLINPYRGDMACKTVHTVRLLINPYRGDMA-CKTVHTVRLLI 165
>SB_48059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSL 202
+ G++ K ++ + NP G + K +HT G +A +T V LIR L
Sbjct: 54 YRGDMACKTVHTVRLLINPYKGDMACKTVHTVRLLINPYKGDMA-CQTVHTVRLLIRLL 111
Score = 25.0 bits (52), Expect = 9.7
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHT 118
+ G++ + ++ +FNP G + K +HT
Sbjct: 248 YRGDMACQTVHTVRLLFNPYRGDMACKTLHT 278
>SB_49377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
++G++ +K ++ + NP G + K +HT G +A KT V LI
Sbjct: 149 YKGDMASKTVHTVRLLINPYRGDMACKTVHTVRLLINPYRGDMA-CKTVHTVRLLI 203
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
+ G++ K ++ + NP G + K +HT G +A KT V LI
Sbjct: 111 YRGDMACKTVHTVRLLINPYRGDMACKTVHTVRLLINPYKGDMAS-KTVHTVRLLI 165
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
++G++ K ++ + NP G + K +HT G +A KT V LI
Sbjct: 73 YKGDMACKTVHTVRLLINPYRGDMACKTVHTVRLLINPYRGDMA-CKTVHTVRLLI 127
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
+ G++ K ++ + NP G + K +HT G +A KT V LI
Sbjct: 16 YRGDMACKTVHTVRLLINPYRGDMACKTVHTVRLLINPYRGDMA-CKTVHTVRLLI 70
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +2
Query: 26 FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI 193
+ G++ K ++ + NP G + K +HT G +A KT V LI
Sbjct: 54 YRGDMACKTVHTVRLLINPYKGDMACKTVHTVRLLINPYRGDMA-CKTVHTVRLLI 108
>SB_20607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 1 VPSDDPQDIRG*FNYEAYQRCYIHIQPQNWTIVP 102
+ +D ++RG + Y QPQ WT VP
Sbjct: 11 IVADKDSNLRGKIPLDFYSNALTARQPQPWTFVP 44
>SB_37932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 25.4 bits (53), Expect = 7.3
Identities = 6/24 (25%), Positives = 19/24 (79%)
Frame = -3
Query: 78 LNMNIAPLIGFVVKLPSNVLWIVT 7
+++ +APL+ F++ + ++++W+ T
Sbjct: 44 ISVMLAPLLNFLIAIYTSIVWVFT 67
>SB_54614| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-38)
Length = 1935
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/28 (35%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 94 IVPQDHSYECMGRSEASRTAR--EMEDR 171
I+P D++ + GR+E++R++R ++ DR
Sbjct: 354 IMPDDYASQVSGRAESTRSSRLSQLSDR 381
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,424,117
Number of Sequences: 59808
Number of extensions: 126600
Number of successful extensions: 404
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 16,821,457
effective HSP length: 53
effective length of database: 13,651,633
effective search space used: 300335926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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