Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_O18
         (227 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L14433-3|AAA27977.1| 2329|Caenorhabditis elegans Yeast prp (spli...   157   1e-39
AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    26   3.1  
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    26   3.1  
Z69902-11|CAA93766.2|  935|Caenorhabditis elegans Hypothetical p...    26   4.1  
AL033535-1|CAB70217.1|  935|Caenorhabditis elegans Hypothetical ...    26   4.1  
AF039034-1|AAB94161.2|  423|Caenorhabditis elegans Hypothetical ...    25   5.5  
Z83744-4|CAB06040.4|  735|Caenorhabditis elegans Hypothetical pr...    25   7.2  
Z83229-3|CAB05740.3|  369|Caenorhabditis elegans Hypothetical pr...    25   7.2  
U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical pr...    25   7.2  

>L14433-3|AAA27977.1| 2329|Caenorhabditis elegans Yeast prp (splicing
            factor) relatedprotein 8 protein.
          Length = 2329

 Score =  157 bits (380), Expect = 1e-39
 Identities = 73/75 (97%), Positives = 74/75 (98%)
 Frame = +2

Query: 2    YRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEV 181
            YRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRL QLAKWKTAEEV
Sbjct: 1779 YRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLSQLAKWKTAEEV 1838

Query: 182  AALIRSLPVEEQPKQ 226
            AALIRSLPVEEQP+Q
Sbjct: 1839 AALIRSLPVEEQPRQ 1853


>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 38  LTTKPINGAIFIFNPRTGQLFLKIIHTSV 124
           L T P++    +F+P +  L L ++HT V
Sbjct: 14  LNTLPVHNESLVFSPLSIALVLSLVHTGV 42


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 38  LTTKPINGAIFIFNPRTGQLFLKIIHTSV 124
           L T P++    +F+P +  L L ++HT V
Sbjct: 14  LNTLPVHNESLVFSPLSIALVLSLVHTGV 42


>Z69902-11|CAA93766.2|  935|Caenorhabditis elegans Hypothetical
           protein C47D12.8 protein.
          Length = 935

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 128 AGQKRLGQLAKWKTAEEVAALIRSLPVEEQPK 223
           A  K+    AKW    E+   I+ LPVE++ +
Sbjct: 359 ADYKKFATPAKWTVLSEILREIKMLPVEKKDR 390


>AL033535-1|CAB70217.1|  935|Caenorhabditis elegans Hypothetical
           protein C47D12.8 protein.
          Length = 935

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 128 AGQKRLGQLAKWKTAEEVAALIRSLPVEEQPK 223
           A  K+    AKW    E+   I+ LPVE++ +
Sbjct: 359 ADYKKFATPAKWTVLSEILREIKMLPVEKKDR 390


>AF039034-1|AAB94161.2|  423|Caenorhabditis elegans Hypothetical
           protein H22D07.1 protein.
          Length = 423

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 7/27 (25%), Positives = 18/27 (66%)
 Frame = -3

Query: 87  VLGLNMNIAPLIGFVVKLPSNVLWIVT 7
           +L + +N+A L+   + +P  ++W++T
Sbjct: 72  LLRITLNLADLMTLFLYVPKQIIWLIT 98


>Z83744-4|CAB06040.4|  735|Caenorhabditis elegans Hypothetical
           protein C06A12.4 protein.
          Length = 735

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
 Frame = +1

Query: 37  FNYEAYQRCYIHIQPQN-------WTIVPQDHSYECMGRSEASRTAREMEDR*RSGCSNS 195
           F+Y  Y  CY  +  +N       W  VP++     + ++  +R  RE+E+R     +N+
Sbjct: 130 FSYSVYNWCYETVIGENTRKYKMTWK-VPKESLKIIVNKNADARMQRELENRTAKDEANA 188

Query: 196 LTA 204
           LT+
Sbjct: 189 LTS 191


>Z83229-3|CAB05740.3|  369|Caenorhabditis elegans Hypothetical
           protein F54F11.3 protein.
          Length = 369

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = +2

Query: 8   VTIH-KTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAE 175
           V IH K+F  NLT   I   I  F      + +K   T  W   +   QL +W T +
Sbjct: 55  VAIHIKSFHRNLTVLLIILMIQWFEGLLSNILIKPYETGFWPLGEHNTQLKQWWTKD 111


>U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical protein
            ZK154.5 protein.
          Length = 1105

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 124  YTRMNDLEEQLSSSGVEYEYST 59
            Y + ND EE+L+   V +EY T
Sbjct: 998  YMKENDEEEELAGETVSFEYFT 1019


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,471,725
Number of Sequences: 27780
Number of extensions: 96414
Number of successful extensions: 228
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 12,740,198
effective HSP length: 55
effective length of database: 11,212,298
effective search space used: 224245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)