Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_O18
         (227 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   1.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   1.9  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   2.5  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          20   3.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    20   3.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    20   3.4  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    19   7.8  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     19   7.8  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    19   7.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    19   7.8  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 1.9
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 99   NNCPVLGLNMNIAPLIGFVVKLPSNVLWIVTRY 1
            N CP+L   +   P+  F   L SN + +  R+
Sbjct: 1525 NGCPILYFTIQYRPINEFHWTLVSNSVKMQRRF 1557


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 1.9
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 99   NNCPVLGLNMNIAPLIGFVVKLPSNVLWIVTRY 1
            N CP+L   +   P+  F   L SN + +  R+
Sbjct: 1521 NGCPILYFTIQYRPINEFHWTLVSNSVKMQRRF 1553


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 20.6 bits (41), Expect = 2.5
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 109 DLEEQLSSSGVEYEYSTVDRLR 44
           +L++ L S   +YE+S  D+L+
Sbjct: 39  ELDKVLESPRGKYEFSKYDKLK 60


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 20.2 bits (40), Expect = 3.4
 Identities = 7/14 (50%), Positives = 12/14 (85%), Gaps = 1/14 (7%)
 Frame = +2

Query: 104 KIIHTSVW-AGQKR 142
           +++HT+VW AG +R
Sbjct: 86  RVLHTTVWVAGAQR 99


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 3.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 109 DLEEQLSSSGVEYEYSTVDRLR 44
           +L+  L S   +YE+S  D+L+
Sbjct: 136 ELDRVLESPRGKYEFSKYDKLK 157


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 3.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 109 DLEEQLSSSGVEYEYSTVDRLR 44
           +L+  L S   +YE+S  D+L+
Sbjct: 151 ELDRVLESPRGKYEFSKYDKLK 172


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 115 YECMGRSEAS 144
           YEC GRS  S
Sbjct: 62  YECEGRSAGS 71


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 115 YECMGRSEAS 144
           YEC GRS  S
Sbjct: 62  YECEGRSAGS 71


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +2

Query: 104 KIIHTSVWAGQKRLGQLAKWKTAE 175
           +++ T+VW  Q+      KW   E
Sbjct: 78  QVMTTNVWVEQRWNDYKLKWNPEE 101


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 104 KIIHTSVWAGQKRLG 148
           K+I +SV AG++ LG
Sbjct: 596 KVIASSVSAGEEGLG 610


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,667
Number of Sequences: 438
Number of extensions: 1417
Number of successful extensions: 37
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3659655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)