Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_O17
         (602 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           24   0.86 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   3.5  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   6.1  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.0  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.2 bits (50), Expect = 0.86
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 539 TSPQPRINLPIPSVPAPL 592
           TSP+P   +P+   PAPL
Sbjct: 78  TSPEPDPEIPVAPEPAPL 95


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 517 CDISKHTHIATAQDQSPDSFCTCP 588
           CD S   + AT QD +    C CP
Sbjct: 65  CDSSPCLNGATCQDHTTHYTCHCP 88


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/28 (35%), Positives = 11/28 (39%)
 Frame = +1

Query: 340 WSPALTISKVLLSICSLLCDPNPDDPLV 423
           WSPA T +            P P DP V
Sbjct: 108 WSPAATAAATATEYKYSAAAPGPSDPSV 135


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +2

Query: 320 WTFCVHNGH 346
           W FC  NGH
Sbjct: 61  WEFCQRNGH 69


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 410 MTHWYLKLLGSTK 448
           + HWY ++L STK
Sbjct: 164 LIHWYPRMLISTK 176


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 410 MTHWYLKLLGSTK 448
           + HWY ++L STK
Sbjct: 164 LIHWYPRMLISTK 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,294
Number of Sequences: 336
Number of extensions: 4242
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)