Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_O17
(602 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 264 2e-71
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 264 2e-71
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 262 2e-70
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 262 2e-70
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 261 3e-70
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 261 3e-70
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 261 3e-70
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 260 7e-70
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 259 9e-70
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 259 9e-70
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 256 8e-69
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 254 3e-68
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 235 2e-62
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 193 9e-50
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 186 1e-47
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 165 2e-41
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 157 5e-39
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 153 6e-38
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 153 6e-38
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 153 9e-38
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 153 1e-37
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 150 6e-37
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 145 2e-35
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 138 3e-33
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 130 5e-31
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 124 5e-29
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 119 2e-27
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 114 4e-26
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 113 6e-26
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 108 2e-24
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 107 7e-24
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 106 1e-23
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 105 2e-23
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 104 5e-23
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 103 1e-22
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 103 1e-22
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 98 3e-21
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 95 2e-20
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 88 5e-18
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 77 9e-15
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 77 9e-15
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 77 1e-14
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 73 2e-13
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 73 2e-13
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 73 2e-13
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 72 3e-13
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 58 3e-09
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 56 1e-08
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 56 2e-08
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 50 2e-06
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 46 3e-05
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 45 3e-05
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 45 4e-05
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 45 4e-05
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 41 7e-04
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 40 0.001
At3g43280.1 68416.m04568 hypothetical protein predicted protein,... 32 0.25
At4g03470.1 68417.m00474 ankyrin repeat family protein contains ... 29 2.4
At2g35610.1 68415.m04365 expressed protein 29 3.1
At5g03905.1 68418.m00370 hesB-like domain-containing protein low... 27 7.2
At2g16910.1 68415.m01948 basic helix-loop-helix (bHLH) family pr... 27 7.2
At5g42740.1 68418.m05205 glucose-6-phosphate isomerase, cytosoli... 27 9.6
At2g35230.2 68415.m04322 VQ motif-containing protein contains PF... 27 9.6
At2g35230.1 68415.m04321 VQ motif-containing protein contains PF... 27 9.6
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 264 bits (648), Expect = 2e-71
Identities = 115/147 (78%), Positives = 128/147 (87%)
Frame = +1
Query: 64 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 243
MA KRIN+EL+DL RDPP CSAGP G+D+F WQATIMGP DSP+ GGVF +TIHFP DY
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 244 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 423
PFKPPKVAF T++YHPNINSNGSICLDIL+ QWSPALT+SKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120
Query: 424 PEIARIYKTDREQYNELAREWTRKYAM 504
PEIA IYKTDR +Y A+ WT+KYAM
Sbjct: 121 PEIAHIYKTDRVKYESTAQSWTQKYAM 147
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 264 bits (648), Expect = 2e-71
Identities = 115/147 (78%), Positives = 128/147 (87%)
Frame = +1
Query: 64 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 243
MA KRIN+EL+DL RDPP CSAGP G+D+F WQATIMGP DSP+ GGVF +TIHFP DY
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 244 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 423
PFKPPKVAF T++YHPNINSNGSICLDIL+ QWSPALT+SKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120
Query: 424 PEIARIYKTDREQYNELAREWTRKYAM 504
PEIA IYKTDR +Y A+ WT+KYAM
Sbjct: 121 PEIAHIYKTDRVKYESTAQSWTQKYAM 147
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 262 bits (641), Expect = 2e-70
Identities = 114/148 (77%), Positives = 128/148 (86%)
Frame = +1
Query: 61 QMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTD 240
+MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP DSPY GGVF +TIHFP D
Sbjct: 30 EMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPD 89
Query: 241 YPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPL 420
YPFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPL
Sbjct: 90 YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 149
Query: 421 VPEIARIYKTDREQYNELAREWTRKYAM 504
VPEIA +YKTD+ +Y AR WT+KYAM
Sbjct: 150 VPEIAHMYKTDKNKYESTARTWTQKYAM 177
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 262 bits (641), Expect = 2e-70
Identities = 114/147 (77%), Positives = 127/147 (86%)
Frame = +1
Query: 64 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 243
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP DSPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 244 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 423
PFKPPKVAF T+++HPN+NSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 424 PEIARIYKTDREQYNELAREWTRKYAM 504
PEIA +YKTDR +Y AR WT+KYAM
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAM 147
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 261 bits (639), Expect = 3e-70
Identities = 114/147 (77%), Positives = 127/147 (86%)
Frame = +1
Query: 64 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 243
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP +SPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 244 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 423
PFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 424 PEIARIYKTDREQYNELAREWTRKYAM 504
PEIA +YKTDR +Y AR WT+KYAM
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAM 147
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 261 bits (639), Expect = 3e-70
Identities = 114/147 (77%), Positives = 127/147 (86%)
Frame = +1
Query: 64 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 243
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP +SPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 244 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 423
PFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 424 PEIARIYKTDREQYNELAREWTRKYAM 504
PEIA +YKTDR +Y AR WT+KYAM
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAM 147
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 261 bits (639), Expect = 3e-70
Identities = 114/147 (77%), Positives = 127/147 (86%)
Frame = +1
Query: 64 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 243
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP DSPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 244 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 423
PFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 424 PEIARIYKTDREQYNELAREWTRKYAM 504
PEIA +YKTD+ +Y AR WT+KYAM
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAM 147
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 260 bits (636), Expect = 7e-70
Identities = 113/147 (76%), Positives = 128/147 (87%)
Frame = +1
Query: 64 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 243
MA KRI +EL+DL +DPP+ CSAGP ED+FHWQATIMGP +SPY GGVF ++IHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 244 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 423
PFKPPKV+F T++YHPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 424 PEIARIYKTDREQYNELAREWTRKYAM 504
PEIA +YKTDR +Y AR WT+KYAM
Sbjct: 121 PEIAHMYKTDRSKYESTARSWTQKYAM 147
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 259 bits (635), Expect = 9e-70
Identities = 113/147 (76%), Positives = 127/147 (86%)
Frame = +1
Query: 64 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 243
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP +SPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 244 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 423
PFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 424 PEIARIYKTDREQYNELAREWTRKYAM 504
PEIA +YKTD+ +Y AR WT+KYAM
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAM 147
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 259 bits (635), Expect = 9e-70
Identities = 113/147 (76%), Positives = 127/147 (86%)
Frame = +1
Query: 64 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 243
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP +SPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 244 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 423
PFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 424 PEIARIYKTDREQYNELAREWTRKYAM 504
PEIA +YKTD+ +Y AR WT+KYAM
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAM 147
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 256 bits (627), Expect = 8e-69
Identities = 110/147 (74%), Positives = 127/147 (86%)
Frame = +1
Query: 64 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 243
MA +RI +EL++L RDPP CSAGP GED+FHWQATIMGP +SPY GGVF + IHFP DY
Sbjct: 1 MATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDY 60
Query: 244 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 423
PFKPPKV F T+++HPNINSNG+ICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 424 PEIARIYKTDREQYNELAREWTRKYAM 504
PEIA IYKTD+ +Y +AR WT+KYA+
Sbjct: 121 PEIAHIYKTDKTKYEAMARSWTQKYAL 147
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 254 bits (622), Expect = 3e-68
Identities = 113/148 (76%), Positives = 126/148 (85%), Gaps = 1/148 (0%)
Frame = +1
Query: 64 MALKRINRELQDLGRDPPAQCS-AGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTD 240
MA KRI +EL+DL +DPP C AGP ED+FHWQATIMGP +SPY GGVF +TIHFP D
Sbjct: 1 MASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60
Query: 241 YPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPL 420
YPFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPL
Sbjct: 61 YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 120
Query: 421 VPEIARIYKTDREQYNELAREWTRKYAM 504
VPEIA +YKTDR +Y AR WT+KYAM
Sbjct: 121 VPEIAHMYKTDRAKYEATARNWTQKYAM 148
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 235 bits (575), Expect = 2e-62
Identities = 105/148 (70%), Positives = 123/148 (83%), Gaps = 1/148 (0%)
Frame = +1
Query: 64 MALKRINRELQDLGRDPPAQCSAGPHGE-DLFHWQATIMGPVDSPYQGGVFFLTIHFPTD 240
MA KRI+REL+D+ R PPA CSAGP E D+FHWQATIMGP DSPY GGVF ++I F +D
Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSD 60
Query: 241 YPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPL 420
YPFKPPKV F T++YHPNI+S GSICLDIL+ QWSPA T SKVLLSICSLL DPNP+DPL
Sbjct: 61 YPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPL 120
Query: 421 VPEIARIYKTDREQYNELAREWTRKYAM 504
VPEIA +YK D+ +Y A++WT+KYAM
Sbjct: 121 VPEIAHLYKVDKSKYESTAQKWTQKYAM 148
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 193 bits (470), Expect = 9e-50
Identities = 82/143 (57%), Positives = 111/143 (77%)
Frame = +1
Query: 73 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 252
KRI RE+ +L DPP CSAGP G++L+HW ATI+GP +PY+GG+FFL I FP+DYPFK
Sbjct: 39 KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFK 98
Query: 253 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 432
PPK+ F TRIYH N+++ G + ++ILR WSPALTI+KVL +I S+ P P P +P I
Sbjct: 99 PPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVI 158
Query: 433 ARIYKTDREQYNELAREWTRKYA 501
AR+Y TDRE+++E+A+EWT ++A
Sbjct: 159 ARLYLTDREKHDEVAKEWTLRFA 181
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 186 bits (452), Expect = 1e-47
Identities = 80/104 (76%), Positives = 90/104 (86%)
Frame = +1
Query: 64 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 243
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP +SPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 244 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLL 375
PFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKV L
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVTL 104
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 165 bits (401), Expect = 2e-41
Identities = 71/125 (56%), Positives = 95/125 (76%)
Frame = +1
Query: 127 SAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSN 306
S G + +++ W A I GP +PY+GG+F L+I FPTDYPFKPPK F T IYHPNIN
Sbjct: 28 SIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDE 87
Query: 307 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREQYNELAREW 486
GSIC++IL+ +W+PAL + KVLLSI LL PNPDDPLVPEI +++K +R Q+++ ARE+
Sbjct: 88 GSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREF 147
Query: 487 TRKYA 501
T ++A
Sbjct: 148 TARHA 152
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 157 bits (381), Expect = 5e-39
Identities = 68/134 (50%), Positives = 90/134 (67%)
Frame = +1
Query: 67 ALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYP 246
A KR+ + + L +DPP S P ++ HW A I GP D+P+ GG F LT+HF DYP
Sbjct: 5 AKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYP 64
Query: 247 FKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVP 426
KPP V F +R++HPNI ++GSICLDIL+ QWSP ++ VL SI SLLCDPNPD P
Sbjct: 65 NKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANA 124
Query: 427 EIARIYKTDREQYN 468
E AR++ ++ +YN
Sbjct: 125 EAARLFSENKREYN 138
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 153 bits (372), Expect = 6e-38
Identities = 67/139 (48%), Positives = 91/139 (65%)
Frame = +1
Query: 67 ALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYP 246
A KR+ R+ + L +DPPA S P ++ W A I GP D+P+ GG F L++ F DYP
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYP 64
Query: 247 FKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVP 426
KPP V F +R++HPNI ++GSICLDIL+ QWSP ++ +L SI SLLCDPNP+ P
Sbjct: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
Query: 427 EIARIYKTDREQYNELARE 483
E AR+Y + +YN R+
Sbjct: 125 EAARMYSESKREYNRRVRD 143
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 153 bits (372), Expect = 6e-38
Identities = 67/139 (48%), Positives = 91/139 (65%)
Frame = +1
Query: 67 ALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYP 246
A KR+ R+ + L +DPPA S P ++ W A I GP D+P+ GG F L++ F DYP
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYP 64
Query: 247 FKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVP 426
KPP V F +R++HPNI ++GSICLDIL+ QWSP ++ +L SI SLLCDPNP+ P
Sbjct: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
Query: 427 EIARIYKTDREQYNELARE 483
E AR+Y + +YN R+
Sbjct: 125 EAARMYSESKREYNRRVRD 143
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 153 bits (371), Expect = 9e-38
Identities = 67/139 (48%), Positives = 91/139 (65%)
Frame = +1
Query: 67 ALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYP 246
A KR+ R+ + L +DPPA S P ++ W A I GP D+P+ GG F L++ F DYP
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYP 64
Query: 247 FKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVP 426
KPP V F +R++HPNI ++GSICLDIL+ QWSP ++ +L SI SLLCDPNP+ P
Sbjct: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
Query: 427 EIARIYKTDREQYNELARE 483
E AR++ + +YN RE
Sbjct: 125 EAARMFSESKREYNRRVRE 143
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 153 bits (370), Expect = 1e-37
Identities = 73/143 (51%), Positives = 95/143 (66%)
Frame = +1
Query: 73 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 252
+RI +E Q L +P SA P E++ ++ I+GP SPY+GGVF L + P +YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 253 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 432
PKV F T+IYHPNI+ G ICLDIL+ +WSPAL I VLLSI +LL PNPDDPL I
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
Query: 433 ARIYKTDREQYNELAREWTRKYA 501
A+ +K++ + E A+EWTR YA
Sbjct: 128 AKHWKSNEAEAVETAKEWTRLYA 150
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 150 bits (364), Expect = 6e-37
Identities = 71/143 (49%), Positives = 95/143 (66%)
Frame = +1
Query: 73 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 252
+RI +E Q L +P SA P +++ ++ I+GP SPY+GGVF L + P +YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 253 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 432
PKV F T+IYHPNI+ G ICLDIL+ +WSPAL I VLLSI +LL PNPDDPL I
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
Query: 433 ARIYKTDREQYNELAREWTRKYA 501
A+ +K++ + + A+EWTR YA
Sbjct: 128 AKHWKSNEAEAVDTAKEWTRLYA 150
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 145 bits (352), Expect = 2e-35
Identities = 65/124 (52%), Positives = 91/124 (73%), Gaps = 2/124 (1%)
Frame = +1
Query: 136 PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 315
P E++F W+AT+ GPV PY+ GVF +++H P YP++PPK+ F T+I+HPNI+ G I
Sbjct: 54 PSPENIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEI 113
Query: 316 CLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV--PEIARIYKTDREQYNELAREWT 489
+DIL ++WS ALTI+ VLLSICS+L NP +PL+ AR+Y+ DR+ Y ++AREWT
Sbjct: 114 FVDILGSRWSSALTINLVLLSICSIL--SNPVEPLLVSNHAARLYQKDRKAYEKVAREWT 171
Query: 490 RKYA 501
KYA
Sbjct: 172 LKYA 175
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 138 bits (333), Expect = 3e-33
Identities = 63/115 (54%), Positives = 80/115 (69%)
Frame = +1
Query: 157 HWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRA 336
++ I+GP SPY+GGVF L + P +YP PKV F T+IYHPNI+ G ICLDIL+
Sbjct: 3 YFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKD 62
Query: 337 QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREQYNELAREWTRKYA 501
+WSPAL I VLLSI +LL PNPDDPL IA+ +K++ + E A+EWTR YA
Sbjct: 63 KWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYA 117
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 130 bits (315), Expect = 5e-31
Identities = 63/144 (43%), Positives = 90/144 (62%), Gaps = 2/144 (1%)
Frame = +1
Query: 76 RINRELQDLGRDPPAQ-CSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 252
RI +ELQD R+ + P ++L TI GP+ +PY+GG F + I P YPF+
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFE 65
Query: 253 PPKVAFTTRIYHPNINS-NGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPE 429
PPK+ F+T+++HPNI+S +G+ICLDIL+ QWSPALT+ L+SI +LL P P DP
Sbjct: 66 PPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAV 125
Query: 430 IARIYKTDREQYNELAREWTRKYA 501
+A Y + + + AR WT +A
Sbjct: 126 VAEQYMKNYQVFVSTARYWTETFA 149
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 124 bits (299), Expect = 5e-29
Identities = 70/155 (45%), Positives = 94/155 (60%), Gaps = 13/155 (8%)
Frame = +1
Query: 76 RINRELQDLGRDPP-----AQCSAGPHGEDLFHWQATI----MGPVDSPYQGGVFFLTIH 228
R+ +EL+ L DPP S+ +G F +TI GP D+ Y G+F L I
Sbjct: 10 RMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQ 69
Query: 229 FPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL----RAQWSPALTISKVLLSICSLLC 396
P YPF+PP V+F T IYHPNI+++G ICLDIL + W P+L IS VL S+ LL
Sbjct: 70 IPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLS 129
Query: 397 DPNPDDPLVPEIARIYKTDREQYNELAREWTRKYA 501
+PNPDD L+ E++R YK +R+ ++ ARE T KYA
Sbjct: 130 EPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYA 164
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 119 bits (286), Expect = 2e-27
Identities = 57/143 (39%), Positives = 90/143 (62%)
Frame = +1
Query: 55 NNQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFP 234
++Q LKR+ EL L SA P +++F W+ TI G D+ ++G + L++ F
Sbjct: 32 DSQSVLKRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFS 91
Query: 235 TDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDD 414
DYPFKPPKV F T +HPN++ G+ICLDIL+ +WS A + +LLSI SLL +PN
Sbjct: 92 NDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISS 151
Query: 415 PLVPEIARIYKTDREQYNELARE 483
PL + A+++ +++E+Y ++ +
Sbjct: 152 PLNTQAAQLW-SNQEEYRKMVEK 173
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 114 bits (275), Expect = 4e-26
Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Frame = +1
Query: 61 QMALKRINRELQDLGRDPPAQCSAGPHGED--LFHWQATIMGPVDSPYQGGVFFLTIHFP 234
Q + R+ +E +++ R+ A +D +F W A I GP ++PY+GGVF L P
Sbjct: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
Query: 235 TDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPD 411
YP +PP+V F T+I+HPN++ G ICLDIL+ WSPA T+ V +I +L+ P PD
Sbjct: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121
Query: 412 DPLVPEIARIYKT-DREQYNELAREWTRKYAM 504
PL + + ++ D +N +A+ +TR AM
Sbjct: 122 SPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 113 bits (273), Expect = 6e-26
Identities = 55/143 (38%), Positives = 88/143 (61%)
Frame = +1
Query: 55 NNQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFP 234
++ LKR+ EL L SA P +++F W+ TI G D+ ++G + L++ F
Sbjct: 33 DSHSVLKRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFS 92
Query: 235 TDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDD 414
DYPFK PKV F T +HPN++ G+ICLDIL+ +WS A + +LLSI SLL +PN
Sbjct: 93 NDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISS 152
Query: 415 PLVPEIARIYKTDREQYNELARE 483
PL + A+++ +++E+Y ++ +
Sbjct: 153 PLNNQAAQLW-SNQEEYRKMVEK 174
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 108 bits (260), Expect = 2e-24
Identities = 51/105 (48%), Positives = 67/105 (63%)
Frame = +1
Query: 73 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 252
+RI +E Q L +P SA P +++ ++ I+GP SPY+GGVF L + P +YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 253 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICS 387
PKV F T+IYHPNI+ G ICLDIL+ +WSPAL I VLL S
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLRYMS 112
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 107 bits (256), Expect = 7e-24
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 14/160 (8%)
Frame = +1
Query: 58 NQMALKRINRELQDLGRDPPAQCSAGPHGE-DLFHWQATIMGPVDSPYQGGVFFLTIHFP 234
N A + ++L+DL + P SAG E ++F W TI+GP D+ Y+GG F+ + FP
Sbjct: 2 NSQACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFP 61
Query: 235 TDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------AQWSPALTISKVLL 375
+YP PP V FT+ I+HPN+ +G +C+ IL +W+P T+ ++L
Sbjct: 62 QNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIML 121
Query: 376 SICSLLCDPNPDDPLVPEIARIYKTDREQYNELAREWTRK 495
SI S+L PN + P E A+ ++ R+++ + RK
Sbjct: 122 SIISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVRK 161
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 106 bits (255), Expect = 1e-23
Identities = 55/161 (34%), Positives = 90/161 (55%), Gaps = 14/161 (8%)
Frame = +1
Query: 55 NNQMALKRINRELQDLGRDPPAQCSAGPHGE-DLFHWQATIMGPVDSPYQGGVFFLTIHF 231
NNQ +L + ++L+DL + P SAG E ++F W +IMGP D+ Y+GG F + F
Sbjct: 3 NNQASLL-LQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSF 61
Query: 232 PTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------AQWSPALTISKVL 372
P +YP PP V FT+ ++HPN+ S+G +C+ IL +W+P T+ ++
Sbjct: 62 PENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIV 121
Query: 373 LSICSLLCDPNPDDPLVPEIARIYKTDREQYNELAREWTRK 495
LSI S+L PN + P E A+ ++ +R ++ + R+
Sbjct: 122 LSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKVSRCVRR 162
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 105 bits (252), Expect = 2e-23
Identities = 50/121 (41%), Positives = 69/121 (57%), Gaps = 2/121 (1%)
Frame = +1
Query: 145 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICL 321
+DL + T GP DS YQGGV+ + + P YP+K P V F +IYHPN++ S+G++CL
Sbjct: 27 DDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCL 86
Query: 322 DILRAQWSPALTISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDREQYNELAREWTRKY 498
D++ WSP + V S + LL PNP DP E A + DR Y +E+ KY
Sbjct: 87 DVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEKY 146
Query: 499 A 501
A
Sbjct: 147 A 147
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 104 bits (249), Expect = 5e-23
Identities = 48/110 (43%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Frame = +1
Query: 178 GPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRAQWSPAL 354
GP DS YQGGV+ + + P YP+K P V F T+IYHPN++ +GS+CLD++ WSP
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMF 97
Query: 355 TISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDREQYNELAREWTRKYA 501
+ V + + LL PNP DPL E A + DR Y + +E+ KYA
Sbjct: 98 DLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYA 147
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 103 bits (246), Expect = 1e-22
Identities = 49/144 (34%), Positives = 81/144 (56%)
Frame = +1
Query: 70 LKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 249
+K++ +EL+ L PP + ED A I GPV +PY+ G+F + + D+P
Sbjct: 12 IKQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPH 71
Query: 250 KPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPE 429
PPK F T+I+HPN+ SNG IC++ L+ W+P+L + VL + LL +P P+ L +
Sbjct: 72 SPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQ 131
Query: 430 IARIYKTDREQYNELAREWTRKYA 501
++ + ++Y AR +T +A
Sbjct: 132 AGKMLLENYDEYARHARLYTGIHA 155
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 103 bits (246), Expect = 1e-22
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Frame = +1
Query: 178 GPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRAQWSPAL 354
GP DS Y+GGV+ + + P YP+K P V F T+IYHPN++ +GS+CLD++ WSP
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMF 97
Query: 355 TISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDREQYNELAREWTRKYA 501
+ V + + LL PNP DPL E A + DR Y + +E+ KYA
Sbjct: 98 DLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYA 147
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 98.3 bits (234), Expect = 3e-21
Identities = 44/119 (36%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
Frame = +1
Query: 148 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 327
+L W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL I
Sbjct: 38 NLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSI 97
Query: 328 LRAQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREQYNELAREWTRKY 498
L W PA+T+ ++L+ I LL PNP DP + ++ D +Y + + +++Y
Sbjct: 98 LNEDYGWRPAITVKQILVGIQDLLDTPNPADPAQTDGYHLFCQDPVEYKKRVKLQSKQY 156
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 95.5 bits (227), Expect = 2e-20
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 13/129 (10%)
Frame = +1
Query: 148 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 327
++F W TI+GP D+ Y+GG F + FP +YP PP V FT+ ++HPN+ S+G +C+ I
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124
Query: 328 LR-------------AQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREQYN 468
L +W+P T+ ++LSI S+L PN + P E A+ ++ R+++
Sbjct: 125 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFK 184
Query: 469 ELAREWTRK 495
+ RK
Sbjct: 185 KKVSRCVRK 193
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 87.8 bits (208), Expect = 5e-18
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +1
Query: 76 RINRELQDLGRDPPAQCSAG-PHGE-DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 249
R+++++ +L P C P+G+ DL +++ TI P + Y G F + YP
Sbjct: 35 RLHKDISELNL--PKSCKISFPNGKNDLMNFEVTIK-PDEGYYLSGNFVFSFQVSNMYPH 91
Query: 250 KPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPE 429
+ PKV T++YHPNI+ G++CL+ILR W P L I+ V+ + L +PN +DPL E
Sbjct: 92 EAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHE 151
Query: 430 IARIYKTDREQY 465
A + + + + +
Sbjct: 152 AAAVLRDNPKTF 163
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 77.0 bits (181), Expect = 9e-15
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 58 NQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 237
+++A R+ +EL + +PP ++L W + G + Y + L + FP
Sbjct: 13 SKIACNRLQKELSEWQVNPPTGFKHRVT-DNLQKWVIEVTGAPGTLYANETYNLQVEFPQ 71
Query: 238 DYPFKPPKVAFTTRI-YHPNINSNGSICLDILRAQWSPALTISKVLLSICSLL 393
YP + P+V F HP+I SNG ICLDIL WSPA+T+S V +SI S+L
Sbjct: 72 HYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 124
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 77.0 bits (181), Expect = 9e-15
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = +1
Query: 58 NQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 237
+++A R+ +EL + +PP ++L W + G + Y + L + FP
Sbjct: 13 SKIACNRLQKELSEWQLNPPTGFRHKVT-DNLQKWTIDVTGAPGTLYANETYQLQVEFPE 71
Query: 238 DYPFKPPKVAFTTRI-YHPNINSNGSICLDILRAQWSPALTISKVLLSICSLL 393
YP + P+V F + HP+I SNG ICLDIL WSPA+T++ V +SI S+L
Sbjct: 72 HYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSML 124
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 76.6 bits (180), Expect = 1e-14
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = +1
Query: 58 NQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 237
+++A R+ +EL + +PP ++L W ++G + Y + L + FP
Sbjct: 13 SKIATNRLQKELVEWQMNPPTGFKHKVT-DNLQRWIIEVIGAPGTLYANDTYQLQVDFPE 71
Query: 238 DYPFKPPKVAFTTRI-YHPNINSNGSICLDILRAQWSPALTISKVLLSICSLL 393
YP + P+V F HP+I SNG ICLDIL WSPA+T+S + +SI S+L
Sbjct: 72 HYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSML 124
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 72.5 bits (170), Expect = 2e-13
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Frame = +1
Query: 61 QMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTD 240
++A R+ +E + +PP+ ++L W + G + Y + L + FP
Sbjct: 14 KIATNRLQKEFMEWQTNPPSGFKHRV-SDNLQRWIIEVHGVPGTLYANETYQLQVEFPEH 72
Query: 241 YPFKPPKVAFTTRI-YHPNINSNGSICLDILRAQWSPALTISKVLLSICSLL 393
YP + P+V F HP+I SNG ICLD+L WSPA+ +S + LSI S+L
Sbjct: 73 YPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSML 124
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 72.5 bits (170), Expect = 2e-13
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Frame = +1
Query: 67 ALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYP 246
A+KRI +E++++ +P + P E++F WQ I GP D+ ++GG++ I P DYP
Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYP 71
Query: 247 FKPPKVAFTTRIYHPNINSNGSICLDILR---AQWSPALTISKVLLSICSLL-CDPN 405
FKPP T + +N ICL I W P+ ++ L+++ + + PN
Sbjct: 72 FKPPSFMLLTP--NGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFMPTSPN 126
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Frame = +1
Query: 70 LKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 249
+KR+ +E + L ++P + A P D+ W + G +P+ GG ++ I FP +YP+
Sbjct: 7 IKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPY 66
Query: 250 KPPKVAFTTRIYHPNINSNGSICL---DILRAQWSPALTISKVLLSICSLLCDPNP 408
KPP + TT + + ICL D W+P ++S +L + S + D +P
Sbjct: 67 KPPGITMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 71.7 bits (168), Expect = 3e-13
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Frame = +1
Query: 70 LKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 249
+KR+ +E + L ++P + A P D+ W + G +P+ GG ++ I FP +YP+
Sbjct: 7 IKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPY 66
Query: 250 KPPKVAFTTRIYHPNINSNGSICL---DILRAQWSPALTISKVLLSICSLLCDPNP 408
KPP + TT + + ICL D W+P ++S +L + S + D +P
Sbjct: 67 KPPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 58.4 bits (135), Expect = 3e-09
Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Frame = +1
Query: 73 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 252
KRI E + L +D P + + +A I+G +PY G+FF I FP YP
Sbjct: 335 KRIQDEWRILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPST 394
Query: 253 PPKVAFTT---RIYHPNINSNGSICLDIL-------RAQWSP-ALTISKVLLSICSLLCD 399
PP V + + RI +PN+ + G +CL +L R +W P T+ +VL+SI L+ +
Sbjct: 395 PPIVHYHSGGLRI-NPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILN 453
Query: 400 PNP 408
P
Sbjct: 454 QKP 456
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 56.4 bits (130), Expect = 1e-08
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Frame = +1
Query: 73 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 252
K+++++ + L + P + + + +A I+G +PYQ G+FF H P+DYP
Sbjct: 853 KKVDQDWKILQNNLPDGIFVRAYEDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSV 912
Query: 253 PPKVAFTTRIY--HPNINSNGSICLDILRA-------QWSP-ALTISKVLLSICSLLCDP 402
PP + + + +PN+ G +CL +L W P + +I +VL+S+ L+ +
Sbjct: 913 PPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNS 972
Query: 403 NP 408
P
Sbjct: 973 KP 974
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 55.6 bits (128), Expect = 2e-08
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Frame = +1
Query: 70 LKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 249
+K++ + + L D P S + +A I+G +PY G+FF I FP YP
Sbjct: 273 VKKVQADWKILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPS 332
Query: 250 KPPKVAFTT---RIYHPNINSNGSICLDIL-------RAQWSP-ALTISKVLLSICSLLC 396
PP V + + RI +PN+ + G +CL +L R +W P T+ ++L+SI +L+
Sbjct: 333 VPPNVHYHSGGLRI-NPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALIL 391
Query: 397 DPNP 408
+ P
Sbjct: 392 NEKP 395
Score = 54.4 bits (125), Expect = 6e-08
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 11/93 (11%)
Frame = +1
Query: 163 QATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT---RIYHPNINSNGSICLDIL- 330
+A I+G +PY G+FF I FP YP PPKV + + RI +PN+ G +CL ++
Sbjct: 638 RAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRI-NPNLYKCGKVCLSLIS 696
Query: 331 ------RAQWSP-ALTISKVLLSICSLLCDPNP 408
R +W P T+ ++L+SI +L+ + P
Sbjct: 697 TWTGKKREKWLPKESTMLQLLVSIQALILNEKP 729
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 163 QATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT---RIYHPNINSNGSICLDI 327
+A I+G +PY G+FF I FP YP PP V + + RI +PN+ + G + + I
Sbjct: 950 RAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRI-NPNLYNCGKVLVSI 1006
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +1
Query: 70 LKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 249
+K++ +E +L + P E + +A ++G +PY G+FF I P YP
Sbjct: 664 VKKVQQEWSNLEANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPH 723
Query: 250 KPPKVAFTT--RIYHPNINSNGSICLDILRAQWS 345
+PP V + + +PN+ +G +CL +L WS
Sbjct: 724 EPPMVHYHSGGMRLNPNLYESGRVCLSLLNT-WS 756
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +1
Query: 160 WQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI---CLDIL 330
W TI+GP ++ Y+G +F L + +YP PP V F TRI +N + L +
Sbjct: 47 WTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPM 106
Query: 331 RAQWSPALTISKVLLSI 381
W T+ +L+ +
Sbjct: 107 LTNWRREYTMEDILVKL 123
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +1
Query: 142 GEDLF--HWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 315
G+D++ W TI+GP ++ ++G ++ L + DYP KPP V F +R+ +N +
Sbjct: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGV 100
Query: 316 CLDI----LRAQWSPALTISKVLLSI 381
+D L A W T+ +L+ +
Sbjct: 101 -VDPKKFGLLANWQREYTMEDILVQL 125
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 44.8 bits (101), Expect = 4e-05
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Frame = +1
Query: 142 GEDLF--HWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 315
G+D++ W TI+GP ++ ++G ++ L + DYP KPP V F +RI +N + +
Sbjct: 40 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGV 99
Query: 316 C----LDILRAQWSPALTISKVLLSI 381
+L A W T+ +L +
Sbjct: 100 VDSKKFGVL-ANWQRQYTMEDILTQL 124
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +1
Query: 160 WQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 315
W TI+GP ++ Y+G +F L + DYP PP V F +RI +N +
Sbjct: 47 WTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGV 98
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 40.7 bits (91), Expect = 7e-04
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Frame = +1
Query: 142 GEDLF--HWQATIMGPVD-SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGS 312
G+D++ W TI+GP + + ++G ++ L + DYP KPP V F +R+ +N
Sbjct: 41 GDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETG 100
Query: 313 ICLDI----LRAQWSPALTISKVLLSI 381
+ +D L A W T+ +L+ +
Sbjct: 101 V-VDPKKFGLLANWQREYTMEDILVQL 126
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +1
Query: 142 GEDLF--HWQATIMGPVD-SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGS 312
G+D++ W TI+GP + + ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 40 GDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTG 99
Query: 313 IC----LDILRAQWSPALTISKVLLSI 381
+ +L A W T+ +L +
Sbjct: 100 VVDSKKFGVL-ANWQRQYTMEDILTQL 125
>At3g43280.1 68416.m04568 hypothetical protein predicted protein,
Arabidopsis thaliana
Length = 157
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3
Query: 255 WFKWIICREMYGQKEYSSLIRAVNWTHNCGLPMKQIFAVWSCGTLC 118
W WI + +SSL++ +N GL +++++A+W+C LC
Sbjct: 70 WICWIKPFRLARSTSFSSLLKP----NNLGLLIRRLYALWTCHLLC 111
>At4g03470.1 68417.m00474 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 683
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = -1
Query: 569 SGD*SWAVAMCVCLLMSQLTHHMAYFLVHSRANSLYCSLSVL*ILAISGTNGSSGFGSHR 390
+G+ W V + CL+ S LT + F+ H + YC S ++ S H
Sbjct: 602 AGNVRWLVYVIFCLIFSILTLAFSRFMPHLLLH--YCGSSYKLMMPFVSFANSCDDDGHE 659
Query: 389 SEQIESNTLDMVSAGD 342
S Q ++ + +S D
Sbjct: 660 SPQFSAHKSEKISNND 675
>At2g35610.1 68415.m04365 expressed protein
Length = 644
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 476 PVSGRGSMPCDESIVTSANIHTSPQPRINLPIPSVPAP 589
P +G S + TS IH+ PQ L +P P P
Sbjct: 44 PTNGSSSFLSFPPLSTSGRIHSLPQENATLELPVAPPP 81
>At5g03905.1 68418.m00370 hesB-like domain-containing protein low
similarity to HesB [Cyanothece sp. PCC 8801] GI:2183309;
contains Pfam profile PF01521: HesB-like domain
Length = 158
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 440 ILAISGTNGSSGFGSHRSEQIESNTLDMVSAGDHCARRM 324
+L S + S S Q ES++ D+V D+C RRM
Sbjct: 23 LLNFSSASAIKEASSSSSSQPESSSNDVVHLSDNCIRRM 61
>At2g16910.1 68415.m01948 basic helix-loop-helix (bHLH) family
protein
Length = 571
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 335 HNGHQH*PYPKCCSQSAHFYVIQTQMTHWY 424
HNGH H P+ +QSAH + + H++
Sbjct: 541 HNGHHH-PFDHQMNQSAHHHHHHQHINHYH 569
>At5g42740.1 68418.m05205 glucose-6-phosphate isomerase, cytosolic
(PGIC) identical to SP|P34795 Glucose-6-phosphate
isomerase, cytosolic (EC 5.3.1.9) (GPI) (Phosphoglucose
isomerase) (PGI) (Phosphohexose isomerase) (PHI)
{Arabidopsis thaliana}; contains Pfam profile PF00342:
glucose-6-phosphate isomerase
Length = 560
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 216 KEYSSLIRAVNWTHNCGLPMKQIFAV 139
KE+S IR+ +W G P+K + A+
Sbjct: 128 KEFSDKIRSGSWVGATGKPLKDVIAI 153
>At2g35230.2 68415.m04322 VQ motif-containing protein contains
PF05678: VQ motif
Length = 295
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 515 IVTSANIHTSPQPRINLPIPSVPAPLLPL 601
+V S H P PR N P+P P P+
Sbjct: 156 LVPSPVPHNLPSPRFNAPVPVTPTQPSPM 184
>At2g35230.1 68415.m04321 VQ motif-containing protein contains
PF05678: VQ motif
Length = 402
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 515 IVTSANIHTSPQPRINLPIPSVPAPLLPL 601
+V S H P PR N P+P P P+
Sbjct: 263 LVPSPVPHNLPSPRFNAPVPVTPTQPSPM 291
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,089,986
Number of Sequences: 28952
Number of extensions: 354227
Number of successful extensions: 1011
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1197101088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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