Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_O12
(681 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.1
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.1
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.1
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.3
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.3
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 21 9.3
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 21 9.3
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 21 9.3
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 21 9.3
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 21 9.3
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.1
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -1
Query: 363 VTIGYVLQVFLGQVQEVILSIEHVVFITRDHHNAIITMFRETYVHLELVHN 211
VTI L VFL V E + + + + + N I+ M + V +V N
Sbjct: 247 VTILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLN 297
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.1
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -1
Query: 363 VTIGYVLQVFLGQVQEVILSIEHVVFITRDHHNAIITMFRETYVHLELVHN 211
VTI L VFL V E + + + + + N I+ M + V +V N
Sbjct: 247 VTILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLN 297
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.1
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -1
Query: 363 VTIGYVLQVFLGQVQEVILSIEHVVFITRDHHNAIITMFRETYVHLELVHN 211
VTI L VFL V E + + + + + N I+ M + V +V N
Sbjct: 247 VTILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLN 297
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.3
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -1
Query: 363 VTIGYVLQVFLGQVQEVILSIEHVVFITRDHHNAIITMFRETYVHLELVHN 211
VTI L VFL V E I + V + + N I+ M + V +V N
Sbjct: 247 VTILLSLTVFLNLVAEKIPTTSDAVPLIGTYFNCIMFMVASSVVLTVVVLN 297
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.3
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -1
Query: 363 VTIGYVLQVFLGQVQEVILSIEHVVFITRDHHNAIITMFRETYVHLELVHN 211
VTI L VFL V E I + V + + N I+ M + V +V N
Sbjct: 247 VTILLSLTVFLNLVAEKIPTTSDAVPLIGTYFNCIMFMVASSVVLTVVVLN 297
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 21.0 bits (42), Expect = 9.3
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 504 LLPRTPFHHKTSNSRRSGIRVRSTAAGTRVFVQNTTEVSERR 379
+L P +K SN S I + T A +F+ T E+R
Sbjct: 19 ILGIAPISYKNSNVNYSKIGIVQTVAYFVIFIILTIVFFEKR 60
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 237 YVHLELVHNTTYILSPQPNQS 175
+VH +VHN L P P S
Sbjct: 72 FVHSGMVHNDGTQLMPSPTVS 92
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 237 YVHLELVHNTTYILSPQPNQS 175
+VH +VHN L P P S
Sbjct: 72 FVHSGMVHNDGTQLMPSPTVS 92
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 21.0 bits (42), Expect = 9.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 518 VSGARCSHGPPFTTK 474
VSG RC +G P ++K
Sbjct: 134 VSGLRCVNGIPVSSK 148
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 21.0 bits (42), Expect = 9.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 518 VSGARCSHGPPFTTK 474
VSG RC +G P ++K
Sbjct: 134 VSGLRCVNGIPVSSK 148
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,661
Number of Sequences: 336
Number of extensions: 2989
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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