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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_O12
         (681 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual        53   4e-08
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi...    29   0.62 
SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyce...    27   1.9  
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce...    26   4.4  
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy...    26   5.8  

>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1279

 Score = 52.8 bits (121), Expect = 4e-08
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 14/132 (10%)
 Frame = +1

Query: 1    DFGVQINLPKRGEPDDDIITIQGYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHRRL 180
            D GVQIN+      ++  I IQG ++   +    I + +  L +     V+I    HR+L
Sbjct: 758  DLGVQINV------EEGHIRIQGIKKNVEETAARIKSQIEALIDDTILRVNIPNDFHRQL 811

Query: 181  IGLRGKNIRRIMDEFKVDIRFPKHGDDS--------------VVVITGDEDNVLDAKDHL 318
            IG  GK +RR+ ++F V +RFP+  D S               VVI G + +V  AK  L
Sbjct: 812  IGSNGKYVRRLEEKFSVRVRFPREDDSSNSTGNELMKPTSPDEVVIRGGKKSVAAAKQEL 871

Query: 319  LNLAEEYLQDVA 354
            L L  EY + +A
Sbjct: 872  LEL-YEYEKSIA 882



 Score = 51.6 bits (118), Expect = 1e-07
 Identities = 30/95 (31%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
 Frame = +1

Query: 10  VQINLPKRGEPDDD-----IITIQGYEEKAL-QAKDAIMAIVHQLDNQCKEEVDIDPRVH 171
           VQ +LPKR E   +     II I G  ++A+ + +  ++A+V+Q       +V IDP + 
Sbjct: 516 VQYHLPKREELQSNSNKTVIIEISGKSQEAVREGRAKLLALVNQFPESKFYKVTIDPLLQ 575

Query: 172 RRLIGLRGKNIRRIMDEFKVDIRFPKHGDDSVVVI 276
           R +IG +GKN++++ +E +V++   ++G++   VI
Sbjct: 576 RYVIGSKGKNLQKLRNEHQVELLVGEYGEEDPDVI 610



 Score = 48.4 bits (110), Expect = 9e-07
 Identities = 26/92 (28%), Positives = 46/92 (50%)
 Frame = +1

Query: 61   IQGYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHRRLIGLRGKNIRRIMDEFKVDIR 240
            ++G++E   +A  ++   + Q+   C   + I   +HRR+IG  G  I +I    +V I 
Sbjct: 1183 VRGHKENVEKAIASLEKSIKQVMENCIAYLGIPTNLHRRIIGSGGSIINKIRKIAQVKID 1242

Query: 241  FPKHGDDSVVVITGDEDNVLDAKDHLLNLAEE 336
             P+   D +VV+ G    V+ AKD +    +E
Sbjct: 1243 VPRTPGDEIVVVQGSRAGVVKAKDLIFERLQE 1274



 Score = 38.3 bits (85), Expect = 0.001
 Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
 Frame = +1

Query: 4    FGVQINLPKRGEPDDDIITIQGYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHRRLI 183
            F V+I++      +   ++++G +     A   I AI  ++ N  ++ + ID   HR LI
Sbjct: 912  FDVKIDIGDVSTEETTPVSVRGAKADVENAIKEISAIAEEVKNLVEKVIKIDREYHRYLI 971

Query: 184  GLRGKNIRRIMDEF-----KVD----IRFPKHGDD---SVVVITGDEDNVLDAKDHLLNL 327
            G  G  ++  + E      K +    I F     +   + VV+ GD++ V   +  LL +
Sbjct: 972  GPNGSKLQNTIKECGGSTDKTETARLISFSNGNSEEERNSVVLRGDKEIVEALETRLLEI 1031

Query: 328  AEEYLQDVADRYQAP 372
             EE    V ++ + P
Sbjct: 1032 VEELKNQVEEKIEVP 1046



 Score = 33.1 bits (72), Expect = 0.038
 Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
 Frame = +1

Query: 31   RGEPDDDIITIQGYEEKALQAKDAIMAIV-----HQLDNQCKEEVDIDPRVHRRLIGLRG 195
            R +  DD + I+G+ +   +    I  +V     H++ +   EE D   +  + +IG  G
Sbjct: 690  RPDSTDDDVYIRGFSKDVERVVSEIKQVVRDAKNHEILHSHVEEFDFPAQYSKNVIGKNG 749

Query: 196  KNIRRIMDEFKVDIRFPKHGDDSVVVITGDEDNVLDAKDHLLNLAEEYLQDVADRYQAP 372
             N+  + ++  V I      ++  + I G + NV +    + +  E  + D   R   P
Sbjct: 750  SNVSSLREDLGVQINV----EEGHIRIQGIKKNVEETAARIKSQIEALIDDTILRVNIP 804



 Score = 29.5 bits (63), Expect = 0.47
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +1

Query: 10   VQINLPKRGEPDDDIITIQGYEEKALQAKDAIMAIVHQLDNQ 135
            V+I++P+   P D+I+ +QG     ++AKD I   + +  NQ
Sbjct: 1239 VKIDVPRT--PGDEIVVVQGSRAGVVKAKDLIFERLQENQNQ 1278



 Score = 29.1 bits (62), Expect = 0.62
 Identities = 28/131 (21%), Positives = 51/131 (38%)
 Frame = +1

Query: 13  QINLPKRGEPDDDIITIQGYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHRRLIGLR 192
           +IN+    +  +    IQG       A+  I+ ++ + + +    +     V   +IG  
Sbjct: 187 RINVSTASKTKNTTFLIQGKTSAVKAARRQILKLIGRRETKT---MPCPVFVVGAIIGTN 243

Query: 193 GKNIRRIMDEFKVDIRFPKHGDDSVVVITGDEDNVLDAKDHLLNLAEEYLQDVADRYQAP 372
           G+N++ IMD     I+ PK  +         +D     K+   N A   L D+  +Y+  
Sbjct: 244 GQNLKSIMDRTSTRIQIPKRNN---TANESSDDAKKPEKEE--NSAASTLDDLEPQYEMT 298

Query: 373 AAPSLADFGSV 405
                 DF  V
Sbjct: 299 TITIEGDFEGV 309


>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 798

 Score = 29.1 bits (62), Expect = 0.62
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +1

Query: 157 DPRVHRRLIGLRGKNIRRIM-DEFKVDIRF 243
           DP V R +I LRG NI  +M  +F +DI F
Sbjct: 410 DPSVCRSIIALRGYNIFGLMLKKFSIDIEF 439


>SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 663

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 154 IDPRVHRRLIGLRGKNIRRIMDEFKVDIRF 243
           +   +H++LIG RG+ I+R+   +   I F
Sbjct: 585 VPEEIHKKLIGFRGEQIQRVTKLYNSYIEF 614


>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 715

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = +1

Query: 199 NIRRIMDEFKVDIRFPKHGDDSVVVITGDEDNVLDAKDHLLNLAEEYLQDVADRYQAPAA 378
           N  +  D FK +  F K  D  +     +++     KD+  +L  EY  D++   Q  A 
Sbjct: 354 NFEKYCDNFKKNY-FSKFKDSEITEDIVEKEYWKLVKDNNTSLEVEYGADLSTLDQGSAF 412

Query: 379 PSLA 390
           PSLA
Sbjct: 413 PSLA 416


>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1201

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1

Query: 546  HGRELVCGSRVRCTLLPRTPFHHKTSNSRRSGIRVRSTAA 427
            HG+ L   + +  T   RT   HK  N +   + ++ T A
Sbjct: 1104 HGQSLTHNNLIAVTPPSRTGVEHKEENKKYDNVNIQKTLA 1143


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,476,866
Number of Sequences: 5004
Number of extensions: 46586
Number of successful extensions: 122
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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