Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_O12
(681 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21167| Best HMM Match : KH_1 (HMM E-Value=0) 89 3e-18
SB_1284| Best HMM Match : KH_1 (HMM E-Value=1.2e-07) 41 8e-04
SB_24937| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_50528| Best HMM Match : Flavi_propep (HMM E-Value=8.5) 36 0.030
SB_27288| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_23543| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_42869| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_7910| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_25283| Best HMM Match : LIM (HMM E-Value=1.1) 29 2.6
SB_30086| Best HMM Match : LIM (HMM E-Value=0.5) 29 2.6
SB_20087| Best HMM Match : DUF1131 (HMM E-Value=1.3) 29 2.6
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_6248| Best HMM Match : KH_1 (HMM E-Value=1.6e-41) 29 3.5
SB_48617| Best HMM Match : Drf_FH1 (HMM E-Value=3.7) 29 3.5
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.6
SB_53706| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3) 29 4.6
SB_59371| Best HMM Match : Ribosomal_L27 (HMM E-Value=0.61) 28 6.1
SB_40544| Best HMM Match : CBM_5_12 (HMM E-Value=8.9) 28 8.0
SB_31020| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_49754| Best HMM Match : DUF1281 (HMM E-Value=5.9) 28 8.0
SB_11429| Best HMM Match : Shikimate_DH (HMM E-Value=7.7) 28 8.0
SB_4780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_21167| Best HMM Match : KH_1 (HMM E-Value=0)
Length = 1650
Score = 89.0 bits (211), Expect = 3e-18
Identities = 38/80 (47%), Positives = 59/80 (73%)
Frame = +1
Query: 127 DNQCKEEVDIDPRVHRRLIGLRGKNIRRIMDEFKVDIRFPKHGDDSVVVITGDEDNVLDA 306
++Q E+ IDPR+HRRLIG +G+ +R++M+++KVDIRFP+ + VVI+G E +V +A
Sbjct: 1110 EDQVSVELTIDPRIHRRLIGAKGRAVRKLMEQYKVDIRFPRQNANDPVVISGQEQDVEEA 1169
Query: 307 KDHLLNLAEEYLQDVADRYQ 366
K+ LL L EEY+Q V + +
Sbjct: 1170 KEQLLLLEEEYMQSVKEEIE 1189
Score = 51.2 bits (117), Expect = 8e-07
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Frame = +1
Query: 7 GVQINLPKRGEPDDDIITIQGYEEKALQAKDAIMAIVHQLD-NQCKEEVDIDPRVHRRLI 183
GV I P G D ++ I+G ++ +AK ++ + ++ + E+ P HR LI
Sbjct: 691 GVSIKFPPEGSNSDKVL-IRGPKDDVEKAKKQLLELTNEKELGSYTVEIRAKPEHHRFLI 749
Query: 184 GLRGKNIRRIMDEFKVDIRFP--KHGDDSVVVITGDEDNVLDAKDHLL 321
G G +IR++ + I FP K D ++ I G ++ V AKD LL
Sbjct: 750 GRGGASIRKVRENTGARIVFPAAKDEDKELITIIGKQEAVEAAKDELL 797
Score = 48.4 bits (110), Expect = 5e-06
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +1
Query: 49 DIITIQGYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHRRLIGLRGKNIRRIMDEFK 228
DII I G +E A AK ++ +V E++ I HR +IG +G N+R++MDEF
Sbjct: 893 DIIIITGKKESAEAAKIDLLDLV-----PVTEQMHIPFDYHRFVIGPKGSNVRKMMDEFS 947
Query: 229 VDIRFPKHGDDS-VVVITGDEDNV 297
V+I P D+S V + G NV
Sbjct: 948 VNISIPPAKDESDSVSVIGPRANV 971
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/127 (25%), Positives = 71/127 (55%), Gaps = 12/127 (9%)
Frame = +1
Query: 1 DFGVQINLPKRGEPDDDIITI--QGYEEKALQAKDAIMAIVHQLDNQ------CKEEVDI 156
+F V I++P + D + I + E+A++A +A +A + + +N+ K +V +
Sbjct: 945 EFSVNISIPPAKDESDSVSVIGPRANVERAMKALEAKVAEI-EAENEDRALRSFKMDVKV 1003
Query: 157 DPRVHRRLIGLRGKNIRRIMDEFKVDIRFPKHG--DDS--VVVITGDEDNVLDAKDHLLN 324
D + H ++IG +G+ I I ++ V+I+FP ++S V+ +TG + + A+D +L
Sbjct: 1004 DRQYHPKIIGRKGQVITNIRKQYDVNIQFPPQDAPEESADVIGLTGYQHSCEAARDAILK 1063
Query: 325 LAEEYLQ 345
+ +E ++
Sbjct: 1064 IVKELVR 1070
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Frame = +1
Query: 7 GVQINLPKRGEPDDDIITIQGYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHRRLIG 186
GV + +P + D + IT++G ++K A+ + + ++ EV +HR +IG
Sbjct: 368 GVSVEMPP-SDSDSETITLRGEQDKL---GVALTQVYEKANSVVFAEVAAPRWLHRFIIG 423
Query: 187 LRGKNIRRIMDEF-KVDIRFPKHGDDSVVVITGDEDNVLDAKDHLLNLAEEYLQDVA 354
RG+NIR++ + KV + F D + + G + V A++ L E + +A
Sbjct: 424 RRGQNIRKVTQDLPKVHVEFSDEKDS--ITLEGPPEQVESARESLEAFIRELIVSMA 478
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 67 GYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHRRLIGLRGKNIRRIMDEFKVDIRFP 246
G +E A+ +M IV +L++ E I HR ++G +G N++ + KV I+FP
Sbjct: 804 GAKECVEGARQRVMEIVQELESMVTIECVIPQEFHRNIMGAKGANVQEVTARHKVQIKFP 863
Query: 247 KHGD-DSVVVITGDEDNV 297
V+ GD +++
Sbjct: 864 DRSPAGEEPVVNGDGEHL 881
>SB_1284| Best HMM Match : KH_1 (HMM E-Value=1.2e-07)
Length = 333
Score = 41.1 bits (92), Expect = 8e-04
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +1
Query: 70 YEEKALQAKDAI---MAIVHQLDNQCKEEVDIDPRVHRRLIGLRGKNIRRIMDEFKVDIR 240
YE++ L +D + + +V N K + I VHR +IG +G R+I + I
Sbjct: 43 YEQEDLTYEDEVCDALNLVESTANGFKSSMGISCEVHRFIIGYKGNTKRQIEQDTNTRIS 102
Query: 241 FPKHGDDSVVVITG-DEDNVLDAKDHLLNLAEE 336
P+ G +VITG + VL A+ H +++ E
Sbjct: 103 IPRVGQTGDIVITGQSKAEVLSAR-HKVDIVVE 134
>SB_24937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +1
Query: 46 DDIITIQGYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHRRLIGLRGKNIRRIMDEF 225
D I + G + AK+ +MA++ ++ ++D+ H +IG G NI+++M +
Sbjct: 312 DPHIKVAGLPDSVRMAKEKVMAVLDTKSSRVTLKMDVSHTDHSHIIGKGGYNIKKVMQDT 371
Query: 226 KVDIRFP 246
I FP
Sbjct: 372 GCHIHFP 378
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 145 EVDIDPRVHRRLIGLRGKNIRRIMDEFKVDIRFP-KHGDD--SVVVITGDEDNVLDAKDH 315
++DI P+ H +IG G NI+ I + + FP +G VV ++G ++V+ A+
Sbjct: 473 QIDIAPQHHLFIIGKNGANIKHITQQTGASVNFPDPNGTQRKGVVFLSGSVESVICARAQ 532
Query: 316 LLN 324
LL+
Sbjct: 533 LLD 535
>SB_50528| Best HMM Match : Flavi_propep (HMM E-Value=8.5)
Length = 358
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +1
Query: 235 IRFPKHGDDSVVVITGDED-----NVLDAKDHLLNLAEEYLQDVADRYQAPAAPS 384
+RF +HGD+S +V+ E+ N+L DHLLN + L+ D A A PS
Sbjct: 286 VRFARHGDESSIVVRDREEAAYLTNLLAGTDHLLNF--DVLRVCTDAIYAKAVPS 338
>SB_27288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.9 bits (69), Expect = 0.49
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +1
Query: 40 PDDDIITIQGYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHRRLIGLRGKNIRRI 213
P + I I+G EKA +A+ I IV + Q EE I ++IG G IR +
Sbjct: 108 PSERTIVIKGEREKARKAELIIKKIVAEQPRQLTEEYLIPQAACGKIIGRGGATIRHL 165
>SB_23543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 869
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Frame = +1
Query: 238 RFPKHGDDSVVVITGDED-----NVLDAKDHLLN 324
R P+HGD+S +V+ E+ N+L DHLLN
Sbjct: 269 REPRHGDESSIVVRDREEAAYLTNLLAGTDHLLN 302
>SB_42869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +1
Query: 145 EVDIDPRVHRRLIGLRGKNIRRIMDEFKVDIR-FPKH-GDDS---VVVITGDEDNVLDAK 309
E++ + RLIG +GKN++ I D+ IR P+ G+ S ++ ++GD + A
Sbjct: 183 EIEFPQILCGRLIGRKGKNVKAISDQSGAKIRLIPQSPGEVSTHRIISLSGDSSQIKSAL 242
Query: 310 DHL 318
D +
Sbjct: 243 DSI 245
>SB_7910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 419
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = +1
Query: 19 NLPKRGEPDDDIITIQGYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHRRLIGLRGK 198
N+P RG ++D + E+ + A D + L N K I PR+ LI L GK
Sbjct: 160 NIPLRGHTEEDS-NFKIILER-IAASDRTLG--DHLANARKNATYISPRIQNELIELCGK 215
Query: 199 NIRRIM 216
NIR +
Sbjct: 216 NIRNTL 221
>SB_25283| Best HMM Match : LIM (HMM E-Value=1.1)
Length = 1097
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Frame = +1
Query: 244 PKHGDDSVVVITGDED-----NVLDAKDHLLN 324
P+HGD+S +V+ E+ N+L DHLLN
Sbjct: 576 PRHGDESSIVVRDREEAAYLTNLLAGTDHLLN 607
>SB_30086| Best HMM Match : LIM (HMM E-Value=0.5)
Length = 715
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Frame = +1
Query: 244 PKHGDDSVVVITGDED-----NVLDAKDHLLN 324
P+HGD+S +V+ E+ N+L DHLLN
Sbjct: 360 PRHGDESSIVVPDREEPAYLTNLLAGTDHLLN 391
>SB_20087| Best HMM Match : DUF1131 (HMM E-Value=1.3)
Length = 262
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Frame = +1
Query: 244 PKHGDDSVVVITGDED-----NVLDAKDHLLN 324
P+HGD+S +V+ E+ N+L DHLLN
Sbjct: 148 PRHGDESSIVVRDREEAAYLTNLLAGTDHLLN 179
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 184 GLRGKNIRRIMDEFKVDIRFPKHGDDSVVVITGDEDNVLDAKDHLLNLAEEYLQDVADRY 363
G GKN D + +++ F G +SVV + ED +L KD + +A + AD +
Sbjct: 1896 GFCGKNCNSKCDIYNINLVFVIDGSNSVVQL--GEDTLLLIKDFVKGIASSFTVSHADTH 1953
>SB_6248| Best HMM Match : KH_1 (HMM E-Value=1.6e-41)
Length = 487
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 178 LIGLRGKNIRRIMDEFKVDIRFP-KHGDDSVVVITGDEDNVLD 303
+IG G NIRR+ E+ + P + ++ V+ IT + LD
Sbjct: 67 IIGKGGTNIRRLRTEYNAVVNVPDTNSNERVLTITAPRQSALD 109
>SB_48617| Best HMM Match : Drf_FH1 (HMM E-Value=3.7)
Length = 477
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 495 RTPFHHKTSNSRRSGIRVRSTAAGTRVFVQN 403
RT H T + R +R A GTRVF+QN
Sbjct: 112 RTRISHTTESLREHARPLRPLAIGTRVFLQN 142
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 352 LRLASIPRPGSRGDP*HRARCLH 284
L LAS PGSRG P H+ R H
Sbjct: 55 LHLASTTAPGSRGKPNHKGRRRH 77
>SB_53706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 226 KVDIRFPKHGDDSVVVITGDEDNVLDAKDHLLNLAEEYLQDVADRYQAPAAPSLAD 393
+ + + +HGD+S +V+ E+ D K ++ LA+ V D+ A P D
Sbjct: 610 RFEAKCARHGDESSIVVRDREEAACDDKQTIVALAKAVACFVVDKEIRGAQPLAED 665
>SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3)
Length = 509
Score = 28.7 bits (61), Expect = 4.6
Identities = 26/67 (38%), Positives = 31/67 (46%)
Frame = -3
Query: 454 RYSRSLHRCRY*SFRSEHYRSQRETARLALGNDRLRLASIPRPGSRGDP*HRARCLHHP* 275
R SR LH C S H+R R L ++RLRL+ P SR HR R +H
Sbjct: 261 RPSRHLH-CHCPRL-SNHHRLSRH-----LHSNRLRLSIHHHPSSRHHHCHRLRLSNHH- 312
Query: 274 SPQRYHH 254
P RY H
Sbjct: 313 RPSRYLH 319
>SB_59371| Best HMM Match : Ribosomal_L27 (HMM E-Value=0.61)
Length = 376
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Frame = +1
Query: 238 RFPKHGDDSVVVITGDED-----NVLDAKDHLLN 324
++ +HGD+S +V+ E+ N+L DHLLN
Sbjct: 223 KYARHGDESSIVVRDREEAAYLTNLLAGTDHLLN 256
>SB_40544| Best HMM Match : CBM_5_12 (HMM E-Value=8.9)
Length = 520
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Frame = +1
Query: 232 DIRFPKHGDDSVVVITGDED-----NVLDAKDHLLN 324
D + +HGD+S +V+ E+ N+L DHLLN
Sbjct: 402 DSKCARHGDESSIVVRDREEAAYLTNLLAGTDHLLN 437
>SB_31020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 680
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Frame = +1
Query: 247 KHGDDSVVVITGDED-----NVLDAKDHLLN 324
+HGD+S++V+ E+ N+L DHLLN
Sbjct: 99 RHGDESLIVVRDREEAAYLTNLLAGTDHLLN 129
>SB_49754| Best HMM Match : DUF1281 (HMM E-Value=5.9)
Length = 338
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Frame = +1
Query: 226 KVDIRFPKHGDDSVVVITGDED-----NVLDAKDHLLN 324
K+ + +HGD+S +V+ E+ N+L DHLLN
Sbjct: 128 KIRSKCARHGDESSIVVRDREEAAYLTNLLAGTDHLLN 165
>SB_11429| Best HMM Match : Shikimate_DH (HMM E-Value=7.7)
Length = 308
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Frame = +1
Query: 232 DIRFPKHGDDSVVVITGDED-----NVLDAKDHLLN 324
D + +HGD+S +V+ E+ N+L DHLLN
Sbjct: 191 DSKCARHGDESSIVVRDREEAAYLTNLLAGTDHLLN 226
>SB_4780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Frame = +1
Query: 232 DIRFPKHGDDSVVVITGDED-----NVLDAKDHLLN 324
D + +HGD+S +V+ E+ N+L DHLLN
Sbjct: 599 DSKCARHGDESSIVVRDREEAAYLTNLLAGTDHLLN 634
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,321,277
Number of Sequences: 59808
Number of extensions: 380690
Number of successful extensions: 1237
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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