Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_O09
(264 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0620 - 19321612-19323237 77 2e-15
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 61 1e-10
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 60 3e-10
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 44 2e-05
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 44 2e-05
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 42 7e-05
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 42 7e-05
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 40 3e-04
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 38 0.001
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 38 0.001
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 35 0.010
11_06_0425 - 23365108-23366028,23366182-23366340,23366445-233666... 26 3.6
06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247 26 4.8
10_08_0785 - 20536265-20537032 25 6.3
03_05_0329 - 23211636-23211857,23211946-23212079,23212170-232124... 25 6.3
02_05_0698 + 31005555-31006763 25 6.3
02_05_0084 - 25690346-25691206 25 8.3
>10_08_0620 - 19321612-19323237
Length = 541
Score = 77.0 bits (181), Expect = 2e-15
Identities = 36/84 (42%), Positives = 46/84 (54%)
Frame = +3
Query: 3 RSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVP 182
RSLHDA CV+RC+ + + YC+R +A+ALEV+P
Sbjct: 405 RSLHDAFCVIRCLVNKRFLIAGGGAPEIEMSMQLAAWAKELRGMESYCVREFAEALEVIP 464
Query: 183 STFAENAGLNPIETVTELRAAHAR 254
T AENAGL+PI TVTELR HA+
Sbjct: 465 YTLAENAGLDPISTVTELRNRHAK 488
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 60.9 bits (141), Expect = 1e-10
Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Frame = +3
Query: 3 RSLHDALCVVR----------------CVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 134
RSLHDALCV+R C+ +
Sbjct: 398 RSLHDALCVIRLVSGLINELQRVNWLRCLVNKRFLIAGGGAPEIEMSMQLAAWAKELQGM 457
Query: 135 DHYCLRAYADALEVVPSTFAENAGLNPIETVTELRAAHAR 254
+ YC++ +A+ALEV+P T AENAGLNPI VTELR HA+
Sbjct: 458 ESYCIKEFAEALEVIPYTLAENAGLNPISIVTELRNRHAK 497
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 59.7 bits (138), Expect = 3e-10
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = +3
Query: 3 RSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVP 182
RSLHDALCV R + R + Y +R++ADAL+ +P
Sbjct: 396 RSLHDALCVARNLIRNNSIVYGGGSAEISCSVAVEAAADRYPGVEQYAIRSFADALDAIP 455
Query: 183 STFAENAGLNPIETVTELRAAHARAAD 263
AEN+GL+PI+T+T +++ + ++
Sbjct: 456 LALAENSGLSPIDTLTAVKSQQVKESN 482
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3
Query: 135 DHYCLRAYADALEVVPSTFAENAGLNPIETVTELRAAHA 251
D Y + +A++ E+VP T AENAGL+ +E ++ L A HA
Sbjct: 432 DQYAIAKFAESFEMVPRTLAENAGLSAMEIISSLYAEHA 470
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 43.6 bits (98), Expect = 2e-05
Identities = 23/82 (28%), Positives = 36/82 (43%)
Frame = +3
Query: 3 RSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVP 182
RSLHDALCV+ + + A++ AL+ +P
Sbjct: 381 RSLHDALCVLSQTVNDTRVLFGGGWPEMVMAKAVDDLARKTPGKKSHAIDAFSRALQAIP 440
Query: 183 STFAENAGLNPIETVTELRAAH 248
+ A+NAGL+ E +++LRA H
Sbjct: 441 TIIADNAGLDSAELISQLRAEH 462
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 41.9 bits (94), Expect = 7e-05
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +3
Query: 3 RSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVP 182
RSLHDA+ +VR + + + ++A ALEV+P
Sbjct: 390 RSLHDAIMIVRRALKNSTVVPGGGAIDMEISKYLRQHARTIAGKSQFFVNSFAKALEVIP 449
Query: 183 STFAENAGLNPIETVTELRAAHA 251
+NAG + + + +LR HA
Sbjct: 450 RQLCDNAGFDATDVLNKLRQKHA 472
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 41.9 bits (94), Expect = 7e-05
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = +3
Query: 3 RSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVP 182
RSLHDALCV+ + + A++ AL+ +P
Sbjct: 358 RSLHDALCVLSQTVNDTRVLYGGGWPEMVMAKEVDGLARKTPGKKSHAIEAFSRALQSIP 417
Query: 183 STFAENAGLNPIETVTELRAAH 248
+ A+NAGL+ + +++LRA H
Sbjct: 418 TIIADNAGLDSADLISQLRAEH 439
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 39.9 bits (89), Expect = 3e-04
Identities = 21/85 (24%), Positives = 33/85 (38%)
Frame = +3
Query: 3 RSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVP 182
RSLHDALC+V+ + + +A++L ++P
Sbjct: 375 RSLHDALCIVKRTLESNMVVAGGGAVEAALSVYLENLATTLGSREQLAIAEFAESLLIIP 434
Query: 183 STFAENAGLNPIETVTELRAAHARA 257
+ NA + E V +LRA H A
Sbjct: 435 KVLSVNAAKDATELVAKLRAYHHTA 459
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 37.5 bits (83), Expect = 0.001
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 147 LRAYADALEVVPSTFAENAGLNPIETVTELRAAHAR 254
+ A+ADAL V+P T AEN+GL+ + + L+ H R
Sbjct: 457 VEAFADALLVIPKTLAENSGLDTQDVIVSLQNEHDR 492
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 37.5 bits (83), Expect = 0.001
Identities = 21/83 (25%), Positives = 33/83 (39%)
Frame = +3
Query: 3 RSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVP 182
R+L DA+ + R + + + + A A A E +P
Sbjct: 391 RNLQDAMSMARNIWKNPKLLPGGGATELTVSATLKQKSSSVEGVEKWPYEAAALAFEAIP 450
Query: 183 STFAENAGLNPIETVTELRAAHA 251
T +N GLN I T+T+L+ HA
Sbjct: 451 RTLLQNCGLNVIRTMTQLQGKHA 473
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 34.7 bits (76), Expect = 0.010
Identities = 20/79 (25%), Positives = 31/79 (39%)
Frame = +3
Query: 3 RSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVP 182
R+L DA+ V R + + + + A A A E +P
Sbjct: 391 RNLQDAMSVARNILKNPKLLPGGGATELTVSAALKQKSSSVEGVEKWPYEAAALAFEAIP 450
Query: 183 STFAENAGLNPIETVTELR 239
T A+N GLN I +T+L+
Sbjct: 451 RTLAQNCGLNVIRIMTQLQ 469
>11_06_0425 -
23365108-23366028,23366182-23366340,23366445-23366640,
23366995-23367527,23367817-23368272,23368507-23368758,
23368890-23369007,23369836-23369993
Length = 930
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 170 KCICIRAEAVVVSSGGSYRSASQCRGGGCLG 78
+C R +AV S GG ++ S G GC G
Sbjct: 705 RCKAARCKAVAASGGGGGQAESAGCGSGCGG 735
>06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247
Length = 974
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 141 YCLRAYADALEVVPSTFAENAGLNP 215
YCLR Y L ++ +T AG NP
Sbjct: 19 YCLRKYLLLLAIMVATVTYAAGFNP 43
>10_08_0785 - 20536265-20537032
Length = 255
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 170 KCICIRAEAVVVSSGGSYRSASQCRGGG 87
KC I EAVV +S S SA+ G G
Sbjct: 216 KCEAIVLEAVVAASSSSSSSAATATGSG 243
>03_05_0329 -
23211636-23211857,23211946-23212079,23212170-23212476,
23212760-23213113
Length = 338
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 182 GHNFKCICIRAEAVVVSSGGSYRSAS 105
G+ F C+CIR ++V S +R A+
Sbjct: 159 GYEFSCVCIRRMELLVLSTLDWRMAA 184
>02_05_0698 + 31005555-31006763
Length = 402
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 206 TGVLRKR*GHNFKCICIRAEAVVVSSGGSYRSASQCRGGG 87
TG LR GH +C+ A +V SG + R+ R GG
Sbjct: 303 TGTLR---GHARAILCLAAAGELVCSGSADRTVRVWRRGG 339
>02_05_0084 - 25690346-25691206
Length = 286
Score = 25.0 bits (52), Expect = 8.3
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = -2
Query: 158 IRAEAVVVSSGGSYRSASQCRGGGCLGCS 72
+R V + + +A++ +GGGC C+
Sbjct: 24 VRVRGEVEAEAAAAAAAAEAQGGGCFDCN 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,750,988
Number of Sequences: 37544
Number of extensions: 61001
Number of successful extensions: 232
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 14,793,348
effective HSP length: 66
effective length of database: 12,315,444
effective search space used: 258624324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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