Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_O09
         (264 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_53295| Best HMM Match : No HMM Matches (HMM E-Value=.)              85   9e-18
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)                  64   1e-11
SB_49103| Best HMM Match : Cpn60_TCP1 (HMM E-Value=2.5e-05)            64   1e-11
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)                   45   1e-05
SB_25100| Best HMM Match : No HMM Matches (HMM E-Value=.)              41   1e-04
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)               38   0.001
SB_45479| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.001
SB_37965| Best HMM Match : TIR (HMM E-Value=3.3)                       38   0.001
SB_5310| Best HMM Match : No HMM Matches (HMM E-Value=.)               36   0.004
SB_17755| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.009
SB_36771| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   1.0  
SB_52903| Best HMM Match : DUF1126 (HMM E-Value=0)                     27   3.2  
SB_12771| Best HMM Match : SET (HMM E-Value=9.1e-18)                   25   7.3  

>SB_53295| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 272

 Score = 85.0 bits (201), Expect = 9e-18
 Identities = 39/84 (46%), Positives = 49/84 (58%)
 Frame = +3

Query: 3   RSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVP 182
           RSLHDALCV+RC+ ++                            D YC+RA+A+ALE++P
Sbjct: 83  RSLHDALCVIRCLVKKRALIAGGGAPEIEVALRLAEYSQTLTSMDAYCVRAFAEALEIIP 142

Query: 183 STFAENAGLNPIETVTELRAAHAR 254
            T AENAGLNPI TVTELR  HA+
Sbjct: 143 YTLAENAGLNPIATVTELRNRHAQ 166


>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
          Length = 505

 Score = 64.5 bits (150), Expect = 1e-11
 Identities = 30/80 (37%), Positives = 42/80 (52%)
 Frame = +3

Query: 3   RSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVP 182
           RS+HDALCVVR + R                             + Y +RAYADAL+ +P
Sbjct: 398 RSIHDALCVVRNLVRDSRVVYGGGATELSCSIAIAKEADKISTIEQYAMRAYADALDNIP 457

Query: 183 STFAENAGLNPIETVTELRA 242
              AEN+GLNPI+TV ++++
Sbjct: 458 LALAENSGLNPIQTVADIKS 477


>SB_49103| Best HMM Match : Cpn60_TCP1 (HMM E-Value=2.5e-05)
          Length = 206

 Score = 64.5 bits (150), Expect = 1e-11
 Identities = 30/80 (37%), Positives = 42/80 (52%)
 Frame = +3

Query: 3   RSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVP 182
           RS+HDALCVVR + R                             + Y +RAYADAL+ +P
Sbjct: 113 RSIHDALCVVRNLVRDSRVVYGGGATELSCSIAIAKEADKIATIEQYAMRAYADALDNIP 172

Query: 183 STFAENAGLNPIETVTELRA 242
              AEN+GLNPI+TV ++++
Sbjct: 173 LALAENSGLNPIQTVADIKS 192


>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
          Length = 531

 Score = 44.8 bits (101), Expect = 1e-05
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +3

Query: 3   RSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVP 182
           RSLHDALCV+    +                             +   + ++A AL  +P
Sbjct: 385 RSLHDALCVLNQTGKENKTVNGGGASEVLMAHAVSQLAAKTPGKEAAAMESFATALRQLP 444

Query: 183 STFAENAGLNPIETVTELRAAHAR 254
           +  A+NAG +  + V +LRAAH +
Sbjct: 445 TIIADNAGYDSADLVAKLRAAHTQ 468


>SB_25100| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 546

 Score = 41.1 bits (92), Expect = 1e-04
 Identities = 18/34 (52%), Positives = 22/34 (64%)
 Frame = +3

Query: 150 RAYADALEVVPSTFAENAGLNPIETVTELRAAHA 251
           +A A  LEV+P T  +N G N I T+T LRA HA
Sbjct: 227 KAVAKGLEVIPRTLIQNCGANTIRTITALRAKHA 260


>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 762

 Score = 38.3 bits (85), Expect = 0.001
 Identities = 16/34 (47%), Positives = 25/34 (73%)
 Frame = +3

Query: 150 RAYADALEVVPSTFAENAGLNPIETVTELRAAHA 251
           +A+ADAL V+P T A+N+G +P ET+ +L   +A
Sbjct: 360 KAFADALLVIPKTLAQNSGFDPQETMVKLLEEYA 393


>SB_45479| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 55

 Score = 38.3 bits (85), Expect = 0.001
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +3

Query: 135 DHYCLRAYADALEVVPSTFAENAGLNPIETVTELRAAH 248
           + Y +  +A++LE VP   A+NAG+   E +++L AAH
Sbjct: 6   EQYAIAKFAESLECVPRALADNAGVKATELISKLYAAH 43


>SB_37965| Best HMM Match : TIR (HMM E-Value=3.3)
          Length = 189

 Score = 37.9 bits (84), Expect = 0.001
 Identities = 20/82 (24%), Positives = 33/82 (40%)
 Frame = +3

Query: 3   RSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVP 182
           RS+HDA+CVV+ V                               +   +  +A++L V+P
Sbjct: 25  RSMHDAICVVKRVLESKTLVPGGGAVEAALSIYLENFATSLGSREQLAIAEFANSLLVIP 84

Query: 183 STFAENAGLNPIETVTELRAAH 248
              + NA  +  + V +LRA H
Sbjct: 85  KILSVNAAKDSADLVAKLRAFH 106


>SB_5310| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 219

 Score = 36.3 bits (80), Expect = 0.004
 Identities = 19/82 (23%), Positives = 30/82 (36%)
 Frame = +3

Query: 3   RSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVP 182
           RSLHDA+ +VR   +                             +   + A A A E++P
Sbjct: 31  RSLHDAIMIVRRAMKNDAVVAGGGAIEMELSKYLRDYSRTIAGKEQLLIGAMAKAFEIIP 90

Query: 183 STFAENAGLNPIETVTELRAAH 248
               +NAG +    + +LR  H
Sbjct: 91  RQLCDNAGFDATNILNKLRQKH 112


>SB_17755| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 317

 Score = 35.1 bits (77), Expect = 0.009
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +3

Query: 150 RAYADALEVVPSTFAENAGLNPIETVTELR 239
           +A A  LEV+P T  +N G N I T+T LR
Sbjct: 284 KAVAKGLEVIPRTLIQNCGANTIRTITALR 313


>SB_36771| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 93

 Score = 28.3 bits (60), Expect = 1.0
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 177 VPSTFAENAGLNPIETVTELRAAHAR 254
           +P+  A+NAG +  + V +LRAAH +
Sbjct: 1   LPTIIADNAGYDSADLVAKLRAAHTQ 26


>SB_52903| Best HMM Match : DUF1126 (HMM E-Value=0)
          Length = 1452

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 162 DALEVVPSTFAENAGLNPIETVTELRAAHAR 254
           DA E V      +AG  PIET+  +R  H R
Sbjct: 580 DADEYVLKHLESHAGHYPIETINSIRQRHGR 610


>SB_12771| Best HMM Match : SET (HMM E-Value=9.1e-18)
          Length = 273

 Score = 25.4 bits (53), Expect = 7.3
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -2

Query: 182 GHN-FKCICIRAEAVVVSSGGSYRSASQCRGG 90
           G+N F C   RA A+  ++GGS  S+S+   G
Sbjct: 92  GNNRFSCYLPRARALRTTTGGSSSSSSRATAG 123


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,302,608
Number of Sequences: 59808
Number of extensions: 59383
Number of successful extensions: 217
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 16,821,457
effective HSP length: 64
effective length of database: 12,993,745
effective search space used: 298856135
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)