BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0003_O08 (564 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical pr... 212 2e-55 AC024214-8|AAF36070.2| 296|Caenorhabditis elegans Hypothetical ... 30 1.0 Z77652-2|CAB01113.1| 665|Caenorhabditis elegans Hypothetical pr... 29 3.1 Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical pr... 28 5.3 Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical pr... 28 5.3 Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical pr... 28 5.3 Z48582-3|CAA88464.1| 401|Caenorhabditis elegans Hypothetical pr... 27 7.0 Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 7.0 Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 7.0 Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 27 7.0 U39848-6|AAL11100.1| 317|Caenorhabditis elegans Not-like (yeast... 27 7.0 U39848-5|AAL11099.1| 367|Caenorhabditis elegans Not-like (yeast... 27 7.0 U39848-4|AAA80691.1| 444|Caenorhabditis elegans Not-like (yeast... 27 7.0 AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 27 9.3 >Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical protein ZC434.2 protein. Length = 194 Score = 212 bits (517), Expect = 2e-55 Identities = 101/184 (54%), Positives = 134/184 (72%), Gaps = 1/184 (0%) Frame = +3 Query: 3 KILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 182 K+LK+ E +SQAL++LETN D+++QL+ELYI KE+EL NK +IIIYVP+P Sbjct: 7 KLLKSDGKVVSEIEKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVP 66 Query: 183 KLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRV-ANKQKRPRSRTLTSVY 359 +LKAF KI LVRELEKKF G+ ++ + R+ILPKP ++ KQKRPRSRTLT+V+ Sbjct: 67 QLKAFHKIHPALVRELEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVH 126 Query: 360 DAXLEDLVFPAEIVGKRIRVKLDGSQLIKVHLDXNQQTTIEHKVDTFQSVYQKFDGARSD 539 DA L++LV+PAE+VG+RIRVKLDG ++ KVHLD + QT + HK+ F SVY+K G Sbjct: 127 DAWLDELVYPAEVVGRRIRVKLDGKKVYKVHLDKSHQTNVGHKIGVFASVYRKLTGKDVT 186 Query: 540 FRVP 551 F P Sbjct: 187 FEFP 190 Score = 28.7 bits (61), Expect = 3.1 Identities = 12/19 (63%), Positives = 17/19 (89%) Frame = +1 Query: 499 SSLYTRSLTGREVTFEFPE 555 +S+Y R LTG++VTFEFP+ Sbjct: 174 ASVY-RKLTGKDVTFEFPD 191 >AC024214-8|AAF36070.2| 296|Caenorhabditis elegans Hypothetical protein Y77E11A.9 protein. Length = 296 Score = 30.3 bits (65), Expect = 1.0 Identities = 10/34 (29%), Positives = 18/34 (52%) Frame = -1 Query: 387 GIPDLPIXRHIQKSVSWNGAFSVCWLHVSCGWAW 286 GIP+ + S++W+G + C+ +C AW Sbjct: 5 GIPNTTNNTQVNTSLTWDGCLTACFYSPACVMAW 38 >Z77652-2|CAB01113.1| 665|Caenorhabditis elegans Hypothetical protein C06B3.2 protein. Length = 665 Score = 28.7 bits (61), Expect = 3.1 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 330 AFSVCWLHVSCGWAWAGSYGH 268 A SV W+ +SC + WAG G+ Sbjct: 572 ALSVLWIILSCHYGWAGPIGN 592 >Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical protein C14H10.2a protein. Length = 746 Score = 27.9 bits (59), Expect = 5.3 Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 4/182 (2%) Frame = +3 Query: 21 AIEPDTFETSISQALVELETNSDLKA-QLRELYITKAKEIELHNKKSIIIYVPMPKLKAF 197 A + TFE+ +Q L EL+ A QL+ + + K KE+E H + P K Sbjct: 394 AAKQSTFESEKTQLLKELDEVKKAHANQLKSIALIK-KELEDHKAAA-----PSVKPTLS 447 Query: 198 QKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKR---PRSRTLTSVYDAX 368 + Q+ +++ +K +V + + K K R + K R R +T A Sbjct: 448 ESEQVDALQQKFEKAEAANVSINEELRSASKELGKIRFQMQGKESDLSRERKMTEALSAQ 507 Query: 369 LEDLVFPAEIVGKRIRVKLDGSQLIKVHLDXNQQTTIEHKVDTFQSVYQKFDGARSDFRV 548 L+ +V ++ + K + + +K ++ QQ IE + + QKF ++ Sbjct: 508 LQSVVSSSQ---EEALKKEEELKKLKATVEL-QQAEIEKMHEDKKEADQKFKNLEKEYAA 563 Query: 549 PR 554 R Sbjct: 564 YR 565 >Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical protein C14H10.2b protein. Length = 412 Score = 27.9 bits (59), Expect = 5.3 Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 4/182 (2%) Frame = +3 Query: 21 AIEPDTFETSISQALVELETNSDLKA-QLRELYITKAKEIELHNKKSIIIYVPMPKLKAF 197 A + TFE+ +Q L EL+ A QL+ + + K KE+E H + P K Sbjct: 60 AAKQSTFESEKTQLLKELDEVKKAHANQLKSIALIK-KELEDHKAAA-----PSVKPTLS 113 Query: 198 QKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKR---PRSRTLTSVYDAX 368 + Q+ +++ +K +V + + K K R + K R R +T A Sbjct: 114 ESEQVDALQQKFEKAEAANVSINEELRSASKELGKIRFQMQGKESDLSRERKMTEALSAQ 173 Query: 369 LEDLVFPAEIVGKRIRVKLDGSQLIKVHLDXNQQTTIEHKVDTFQSVYQKFDGARSDFRV 548 L+ +V ++ + K + + +K ++ QQ IE + + QKF ++ Sbjct: 174 LQSVVSSSQ---EEALKKEEELKKLKATVEL-QQAEIEKMHEDKKEADQKFKNLEKEYAA 229 Query: 549 PR 554 R Sbjct: 230 YR 231 >Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical protein C14H10.2a protein. Length = 746 Score = 27.9 bits (59), Expect = 5.3 Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 4/182 (2%) Frame = +3 Query: 21 AIEPDTFETSISQALVELETNSDLKA-QLRELYITKAKEIELHNKKSIIIYVPMPKLKAF 197 A + TFE+ +Q L EL+ A QL+ + + K KE+E H + P K Sbjct: 394 AAKQSTFESEKTQLLKELDEVKKAHANQLKSIALIK-KELEDHKAAA-----PSVKPTLS 447 Query: 198 QKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKR---PRSRTLTSVYDAX 368 + Q+ +++ +K +V + + K K R + K R R +T A Sbjct: 448 ESEQVDALQQKFEKAEAANVSINEELRSASKELGKIRFQMQGKESDLSRERKMTEALSAQ 507 Query: 369 LEDLVFPAEIVGKRIRVKLDGSQLIKVHLDXNQQTTIEHKVDTFQSVYQKFDGARSDFRV 548 L+ +V ++ + K + + +K ++ QQ IE + + QKF ++ Sbjct: 508 LQSVVSSSQ---EEALKKEEELKKLKATVEL-QQAEIEKMHEDKKEADQKFKNLEKEYAA 563 Query: 549 PR 554 R Sbjct: 564 YR 565 >Z48582-3|CAA88464.1| 401|Caenorhabditis elegans Hypothetical protein F27E5.1 protein. Length = 401 Score = 27.5 bits (58), Expect = 7.0 Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Frame = +3 Query: 30 PDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIY--VPMPKLKAFQK 203 PD ++ + S+ ++ + N DL + R I KA + E+H ++ Y +P + A++ Sbjct: 39 PDIYDPAQSEKVLWFDVNLDLPPRQRFQQIAKAYKKEIHAVFDVLNYFLTIIPGVNAWEL 98 Query: 204 IQIRLVRELEK 236 I L+K Sbjct: 99 IGNMTASALDK 109 >Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein F25F2.2 protein. Length = 4307 Score = 27.5 bits (58), Expect = 7.0 Identities = 20/86 (23%), Positives = 38/86 (44%) Frame = +3 Query: 9 LKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKL 188 LK A P++ TSI Q L+ ++ + + E ++ +K+IE+H + + Sbjct: 2204 LKYTASTPES--TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDY 2261 Query: 189 KAFQKIQIRLVRELEKKFSGKHVVFV 266 + QK ++LV K F+ Sbjct: 2262 EKTQKYDLKLVATSSGKQVSSEAEFI 2287 >Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein F25F2.2 protein. Length = 4307 Score = 27.5 bits (58), Expect = 7.0 Identities = 20/86 (23%), Positives = 38/86 (44%) Frame = +3 Query: 9 LKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKL 188 LK A P++ TSI Q L+ ++ + + E ++ +K+IE+H + + Sbjct: 2204 LKYTASTPES--TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDY 2261 Query: 189 KAFQKIQIRLVRELEKKFSGKHVVFV 266 + QK ++LV K F+ Sbjct: 2262 EKTQKYDLKLVATSSGKQVSSEAEFI 2287 >Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical protein F25F2.2 protein. Length = 4307 Score = 27.5 bits (58), Expect = 7.0 Identities = 20/86 (23%), Positives = 38/86 (44%) Frame = +3 Query: 9 LKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKL 188 LK A P++ TSI Q L+ ++ + + E ++ +K+IE+H + + Sbjct: 2204 LKYTASTPES--TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDY 2261 Query: 189 KAFQKIQIRLVRELEKKFSGKHVVFV 266 + QK ++LV K F+ Sbjct: 2262 EKTQKYDLKLVATSSGKQVSSEAEFI 2287 >U39848-6|AAL11100.1| 317|Caenorhabditis elegans Not-like (yeast ccr4/not complexcomponent) protein 2, isoform c protein. Length = 317 Score = 27.5 bits (58), Expect = 7.0 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +2 Query: 401 WQTHQSEARWLTTHQSASRXKPTDNY 478 W+ H+SE WLT Q + T NY Sbjct: 171 WRFHKSEQVWLTRSQYGGVKEQTGNY 196 >U39848-5|AAL11099.1| 367|Caenorhabditis elegans Not-like (yeast ccr4/not complexcomponent) protein 2, isoform b protein. Length = 367 Score = 27.5 bits (58), Expect = 7.0 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +2 Query: 401 WQTHQSEARWLTTHQSASRXKPTDNY 478 W+ H+SE WLT Q + T NY Sbjct: 221 WRFHKSEQVWLTRSQYGGVKEQTGNY 246 >U39848-4|AAA80691.1| 444|Caenorhabditis elegans Not-like (yeast ccr4/not complexcomponent) protein 2, isoform a protein. Length = 444 Score = 27.5 bits (58), Expect = 7.0 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +2 Query: 401 WQTHQSEARWLTTHQSASRXKPTDNY 478 W+ H+SE WLT Q + T NY Sbjct: 298 WRFHKSEQVWLTRSQYGGVKEQTGNY 323 >AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical protein T07A9.9a protein. Length = 681 Score = 27.1 bits (57), Expect = 9.3 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 300 KTRVANKQKRPRSRTLTSVYDAXLEDLVFPAE 395 K ++ K K RSR+L++V A ++L FP E Sbjct: 599 KPQLGKKMKVGRSRSLSAVRPAPRDELAFPDE 630 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,871,684 Number of Sequences: 27780 Number of extensions: 268332 Number of successful extensions: 741 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 717 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 740 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1166125180 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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