Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_O08
(564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical pr... 212 2e-55
AC024214-8|AAF36070.2| 296|Caenorhabditis elegans Hypothetical ... 30 1.0
Z77652-2|CAB01113.1| 665|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z48582-3|CAA88464.1| 401|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 27 7.0
U39848-6|AAL11100.1| 317|Caenorhabditis elegans Not-like (yeast... 27 7.0
U39848-5|AAL11099.1| 367|Caenorhabditis elegans Not-like (yeast... 27 7.0
U39848-4|AAA80691.1| 444|Caenorhabditis elegans Not-like (yeast... 27 7.0
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 27 9.3
>Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical
protein ZC434.2 protein.
Length = 194
Score = 212 bits (517), Expect = 2e-55
Identities = 101/184 (54%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Frame = +3
Query: 3 KILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 182
K+LK+ E +SQAL++LETN D+++QL+ELYI KE+EL NK +IIIYVP+P
Sbjct: 7 KLLKSDGKVVSEIEKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVP 66
Query: 183 KLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRV-ANKQKRPRSRTLTSVY 359
+LKAF KI LVRELEKKF G+ ++ + R+ILPKP ++ KQKRPRSRTLT+V+
Sbjct: 67 QLKAFHKIHPALVRELEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVH 126
Query: 360 DAXLEDLVFPAEIVGKRIRVKLDGSQLIKVHLDXNQQTTIEHKVDTFQSVYQKFDGARSD 539
DA L++LV+PAE+VG+RIRVKLDG ++ KVHLD + QT + HK+ F SVY+K G
Sbjct: 127 DAWLDELVYPAEVVGRRIRVKLDGKKVYKVHLDKSHQTNVGHKIGVFASVYRKLTGKDVT 186
Query: 540 FRVP 551
F P
Sbjct: 187 FEFP 190
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +1
Query: 499 SSLYTRSLTGREVTFEFPE 555
+S+Y R LTG++VTFEFP+
Sbjct: 174 ASVY-RKLTGKDVTFEFPD 191
>AC024214-8|AAF36070.2| 296|Caenorhabditis elegans Hypothetical
protein Y77E11A.9 protein.
Length = 296
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -1
Query: 387 GIPDLPIXRHIQKSVSWNGAFSVCWLHVSCGWAW 286
GIP+ + S++W+G + C+ +C AW
Sbjct: 5 GIPNTTNNTQVNTSLTWDGCLTACFYSPACVMAW 38
>Z77652-2|CAB01113.1| 665|Caenorhabditis elegans Hypothetical
protein C06B3.2 protein.
Length = 665
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 330 AFSVCWLHVSCGWAWAGSYGH 268
A SV W+ +SC + WAG G+
Sbjct: 572 ALSVLWIILSCHYGWAGPIGN 592
>Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 27.9 bits (59), Expect = 5.3
Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 4/182 (2%)
Frame = +3
Query: 21 AIEPDTFETSISQALVELETNSDLKA-QLRELYITKAKEIELHNKKSIIIYVPMPKLKAF 197
A + TFE+ +Q L EL+ A QL+ + + K KE+E H + P K
Sbjct: 394 AAKQSTFESEKTQLLKELDEVKKAHANQLKSIALIK-KELEDHKAAA-----PSVKPTLS 447
Query: 198 QKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKR---PRSRTLTSVYDAX 368
+ Q+ +++ +K +V + + K K R + K R R +T A
Sbjct: 448 ESEQVDALQQKFEKAEAANVSINEELRSASKELGKIRFQMQGKESDLSRERKMTEALSAQ 507
Query: 369 LEDLVFPAEIVGKRIRVKLDGSQLIKVHLDXNQQTTIEHKVDTFQSVYQKFDGARSDFRV 548
L+ +V ++ + K + + +K ++ QQ IE + + QKF ++
Sbjct: 508 LQSVVSSSQ---EEALKKEEELKKLKATVEL-QQAEIEKMHEDKKEADQKFKNLEKEYAA 563
Query: 549 PR 554
R
Sbjct: 564 YR 565
>Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical
protein C14H10.2b protein.
Length = 412
Score = 27.9 bits (59), Expect = 5.3
Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 4/182 (2%)
Frame = +3
Query: 21 AIEPDTFETSISQALVELETNSDLKA-QLRELYITKAKEIELHNKKSIIIYVPMPKLKAF 197
A + TFE+ +Q L EL+ A QL+ + + K KE+E H + P K
Sbjct: 60 AAKQSTFESEKTQLLKELDEVKKAHANQLKSIALIK-KELEDHKAAA-----PSVKPTLS 113
Query: 198 QKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKR---PRSRTLTSVYDAX 368
+ Q+ +++ +K +V + + K K R + K R R +T A
Sbjct: 114 ESEQVDALQQKFEKAEAANVSINEELRSASKELGKIRFQMQGKESDLSRERKMTEALSAQ 173
Query: 369 LEDLVFPAEIVGKRIRVKLDGSQLIKVHLDXNQQTTIEHKVDTFQSVYQKFDGARSDFRV 548
L+ +V ++ + K + + +K ++ QQ IE + + QKF ++
Sbjct: 174 LQSVVSSSQ---EEALKKEEELKKLKATVEL-QQAEIEKMHEDKKEADQKFKNLEKEYAA 229
Query: 549 PR 554
R
Sbjct: 230 YR 231
>Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 27.9 bits (59), Expect = 5.3
Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 4/182 (2%)
Frame = +3
Query: 21 AIEPDTFETSISQALVELETNSDLKA-QLRELYITKAKEIELHNKKSIIIYVPMPKLKAF 197
A + TFE+ +Q L EL+ A QL+ + + K KE+E H + P K
Sbjct: 394 AAKQSTFESEKTQLLKELDEVKKAHANQLKSIALIK-KELEDHKAAA-----PSVKPTLS 447
Query: 198 QKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKR---PRSRTLTSVYDAX 368
+ Q+ +++ +K +V + + K K R + K R R +T A
Sbjct: 448 ESEQVDALQQKFEKAEAANVSINEELRSASKELGKIRFQMQGKESDLSRERKMTEALSAQ 507
Query: 369 LEDLVFPAEIVGKRIRVKLDGSQLIKVHLDXNQQTTIEHKVDTFQSVYQKFDGARSDFRV 548
L+ +V ++ + K + + +K ++ QQ IE + + QKF ++
Sbjct: 508 LQSVVSSSQ---EEALKKEEELKKLKATVEL-QQAEIEKMHEDKKEADQKFKNLEKEYAA 563
Query: 549 PR 554
R
Sbjct: 564 YR 565
>Z48582-3|CAA88464.1| 401|Caenorhabditis elegans Hypothetical
protein F27E5.1 protein.
Length = 401
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 30 PDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIY--VPMPKLKAFQK 203
PD ++ + S+ ++ + N DL + R I KA + E+H ++ Y +P + A++
Sbjct: 39 PDIYDPAQSEKVLWFDVNLDLPPRQRFQQIAKAYKKEIHAVFDVLNYFLTIIPGVNAWEL 98
Query: 204 IQIRLVRELEK 236
I L+K
Sbjct: 99 IGNMTASALDK 109
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = +3
Query: 9 LKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKL 188
LK A P++ TSI Q L+ ++ + + E ++ +K+IE+H + +
Sbjct: 2204 LKYTASTPES--TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDY 2261
Query: 189 KAFQKIQIRLVRELEKKFSGKHVVFV 266
+ QK ++LV K F+
Sbjct: 2262 EKTQKYDLKLVATSSGKQVSSEAEFI 2287
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = +3
Query: 9 LKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKL 188
LK A P++ TSI Q L+ ++ + + E ++ +K+IE+H + +
Sbjct: 2204 LKYTASTPES--TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDY 2261
Query: 189 KAFQKIQIRLVRELEKKFSGKHVVFV 266
+ QK ++LV K F+
Sbjct: 2262 EKTQKYDLKLVATSSGKQVSSEAEFI 2287
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = +3
Query: 9 LKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKL 188
LK A P++ TSI Q L+ ++ + + E ++ +K+IE+H + +
Sbjct: 2204 LKYTASTPES--TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDY 2261
Query: 189 KAFQKIQIRLVRELEKKFSGKHVVFV 266
+ QK ++LV K F+
Sbjct: 2262 EKTQKYDLKLVATSSGKQVSSEAEFI 2287
>U39848-6|AAL11100.1| 317|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 2, isoform c protein.
Length = 317
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 401 WQTHQSEARWLTTHQSASRXKPTDNY 478
W+ H+SE WLT Q + T NY
Sbjct: 171 WRFHKSEQVWLTRSQYGGVKEQTGNY 196
>U39848-5|AAL11099.1| 367|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 2, isoform b protein.
Length = 367
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 401 WQTHQSEARWLTTHQSASRXKPTDNY 478
W+ H+SE WLT Q + T NY
Sbjct: 221 WRFHKSEQVWLTRSQYGGVKEQTGNY 246
>U39848-4|AAA80691.1| 444|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 2, isoform a protein.
Length = 444
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 401 WQTHQSEARWLTTHQSASRXKPTDNY 478
W+ H+SE WLT Q + T NY
Sbjct: 298 WRFHKSEQVWLTRSQYGGVKEQTGNY 323
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 300 KTRVANKQKRPRSRTLTSVYDAXLEDLVFPAE 395
K ++ K K RSR+L++V A ++L FP E
Sbjct: 599 KPQLGKKMKVGRSRSLSAVRPAPRDELAFPDE 630
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,871,684
Number of Sequences: 27780
Number of extensions: 268332
Number of successful extensions: 741
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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