Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_O06
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 138 2e-33
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 138 2e-33
Z72513-1|CAA96669.1| 260|Caenorhabditis elegans Hypothetical pr... 38 0.005
AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical ... 30 1.3
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 29 3.0
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 29 3.0
Z48716-2|CAA88597.2| 169|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical ... 27 9.1
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 138 bits (335), Expect = 2e-33
Identities = 62/130 (47%), Positives = 88/130 (67%), Gaps = 3/130 (2%)
Frame = +3
Query: 3 EMPECSENEMSDFPRRMRDWLFNIMRDLAERRELTPHYLRMER---EAESNLTRRWTNAA 173
++ EC+E M+ FP RM DWLF +M++L +RREL H L E EAE++ ++
Sbjct: 137 KLDECTEEHMAQFPERMADWLFQVMKELKKRREL--HKLEWEELLSEAENDDEKKHVYPV 194
Query: 174 IWKWCDLDAHDNDRFVSRHELFPIRAPLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQ 353
IWK+C+LD +D+ VS HEL PI AP++ +E CI PFL+ CDA+ D I++ EWGKCL
Sbjct: 195 IWKFCELDTKPHDKSVSHHELIPITAPVIPMESCIKPFLEGCDANNDGNISIKEWGKCLG 254
Query: 354 LDEYELEDRC 383
L E E+++RC
Sbjct: 255 LKEGEIQERC 264
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 138 bits (335), Expect = 2e-33
Identities = 62/130 (47%), Positives = 88/130 (67%), Gaps = 3/130 (2%)
Frame = +3
Query: 3 EMPECSENEMSDFPRRMRDWLFNIMRDLAERRELTPHYLRMER---EAESNLTRRWTNAA 173
++ EC+E M+ FP RM DWLF +M++L +RREL H L E EAE++ ++
Sbjct: 137 KLDECTEEHMAQFPERMADWLFQVMKELKKRREL--HKLEWEELLSEAENDDEKKHVYPV 194
Query: 174 IWKWCDLDAHDNDRFVSRHELFPIRAPLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQ 353
IWK+C+LD +D+ VS HEL PI AP++ +E CI PFL+ CDA+ D I++ EWGKCL
Sbjct: 195 IWKFCELDTKPHDKSVSHHELIPITAPVIPMESCIKPFLEGCDANNDGNISIKEWGKCLG 254
Query: 354 LDEYELEDRC 383
L E E+++RC
Sbjct: 255 LKEGEIQERC 264
>Z72513-1|CAA96669.1| 260|Caenorhabditis elegans Hypothetical
protein T04F3.2 protein.
Length = 260
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +3
Query: 144 NLTRRWTNAAI-WKWCDLDAHDNDRFVSRHELFPIRAPLM---SLEHCIAPFLDQCDADE 311
N T+ ++AI WK+ L+ + N+ + R E P ++ L+ ++ C CD ++
Sbjct: 164 NATKVSRDSAIRWKFNQLNINHNN-VLERSEWKPFKSVLLEWKNVRQCSRNLFKTCDLNK 222
Query: 312 DHRITLAEWGKCL 350
D ++T EW KC+
Sbjct: 223 DRKLTFDEWRKCI 235
>AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical
protein C54E4.2a protein.
Length = 226
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +3
Query: 177 WKWCDLDAHDNDRFVSRHELFPIRAPLMSLEHCIAPFLDQC-DADEDHRITLAEWGKCLQ 353
W + D + + + +S+ EL PI E C+ F+D C D D I++ EW C
Sbjct: 83 WMFNQWDGNQDGK-LSKAELRPIERG--GNEACVEEFIDMCDDMVVDGSISVDEWCDCFT 139
Query: 354 L-DEYELEDRCDEFIDDL 404
D+ E C + D+
Sbjct: 140 FSDDLRHEPPCHKAKHDV 157
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 28.7 bits (61), Expect = 3.0
Identities = 22/63 (34%), Positives = 28/63 (44%)
Frame = -3
Query: 235 NSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRRSARSRIMLNSQS 56
N R + + SR H + +RR R + SRS R SRR RSR S+S
Sbjct: 1511 NRSRSRDRARRSRSREHKRARSRSAERRRRSRTRSRSRSR-ERYRSRRDRRSRTKSRSRS 1569
Query: 55 RMR 47
R R
Sbjct: 1570 RSR 1572
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 28.7 bits (61), Expect = 3.0
Identities = 22/63 (34%), Positives = 28/63 (44%)
Frame = -3
Query: 235 NSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRRSARSRIMLNSQS 56
N R + + SR H + +RR R + SRS R SRR RSR S+S
Sbjct: 136 NRSRSRDRARRSRSREHKRARSRSAERRRRSRTRSRSRSR-ERYRSRRDRRSRTKSRSRS 194
Query: 55 RMR 47
R R
Sbjct: 195 RSR 197
>Z48716-2|CAA88597.2| 169|Caenorhabditis elegans Hypothetical
protein F59B10.3 protein.
Length = 169
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 60 WLFNIMRDLAERRELTPHY 116
WLFN +D ++REL HY
Sbjct: 115 WLFNRSKDKQQKRELYEHY 133
>AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical
protein C54E4.2b protein.
Length = 234
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +3
Query: 267 EHCIAPFLDQC-DADEDHRITLAEWGKCLQL-DEYELEDRCDEFIDDL 404
E C+ F+D C D D I++ EW C D+ E C + D+
Sbjct: 118 EACVEEFIDMCDDMVVDGSISVDEWCDCFTFSDDLRHEPPCHKAKHDV 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,642,828
Number of Sequences: 27780
Number of extensions: 200655
Number of successful extensions: 526
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -