Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_O05
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    25   0.33 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   2.3  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   2.3  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   4.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   5.4  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   5.4  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   5.4  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   5.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.4  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 25.4 bits (53), Expect = 0.33
 Identities = 14/61 (22%), Positives = 25/61 (40%)
 Frame = +1

Query: 352 IQPCICTREIKQVCGSDGVTYGNPCLLNCATQSNPSLSIEHPGPCDNRVKVVENQPESNK 531
           ++P  CT + +   GS G+  G+P     A       S+    PC   +    +QP   +
Sbjct: 139 VRPAACTPDSRVGYGSVGLVGGDPASSPGAAAGRTGNSLSWNNPCS--INSTSSQPVGTQ 196

Query: 532 V 534
           +
Sbjct: 197 I 197


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 472 VRCSSSGSTVWRNSTGTG 419
           VRC  +GST  R +TG G
Sbjct: 918 VRCVCAGSTGTRRATGCG 935


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/34 (32%), Positives = 13/34 (38%)
 Frame = -3

Query: 419 LP*VTPSLPQTCLISRVQIHGCISATLTSWHSPR 318
           +P   P  P         I   I   +T WHSPR
Sbjct: 42  IPATAPQKPDKWEDVMADIERVIMPGVTHWHSPR 75


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 253 TYPNKCSLECSRPLAPSLE 309
           T P K  ++  RPLAP+ E
Sbjct: 37  TQPTKTVIQSKRPLAPAPE 55


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 111 LPQPVPLVLREGQDAQR 161
           LP+P PLV ++G + +R
Sbjct: 236 LPKPTPLVPQQGFNMER 252


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +1

Query: 376 EIKQVCGSDGVTYGNPCLLNCATQSNPSLSI 468
           +I+     + V  GN   L C    NP+  I
Sbjct: 415 QIRHAFNEETVQPGNSVFLKCIASGNPTPEI 445


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 13/49 (26%), Positives = 19/49 (38%)
 Frame = -1

Query: 283 NTPVNIY*GKCSRLCHRPGHI*RYRRKDRLPHTYPLSRFSNRCASCPSR 137
           N+PV+   G    L    G+          P  +PLS   + C+ C  R
Sbjct: 44  NSPVSFSMGGHGSLLSPSGNTPNKSSTSPYPPNHPLSGSKHLCSICGDR 92


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +3

Query: 228 PGLWHRREHLP 260
           P +WH   H+P
Sbjct: 47  PQMWHHHSHMP 57


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +3

Query: 228 PGLWHRREHLP 260
           P +WH   H+P
Sbjct: 47  PQMWHHHSHMP 57


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 80  KFLAHAHDDG 51
           KF++H H+DG
Sbjct: 230 KFMSHIHNDG 239


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -1

Query: 514 GFPQPSLCCRKDPGVRCSSSGSTVWRNSTGTGC 416
           G P PS      P  R S+S  T    S  T C
Sbjct: 73  GAPSPSSTPSSLPTQRTSTSNPTYSSRSVMTSC 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,386
Number of Sequences: 336
Number of extensions: 3085
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)