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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_O04
         (520 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,489...    31   0.55 
05_03_0619 + 16274255-16274396,16274775-16274848,16275111-162761...    31   0.73 
07_03_0997 - 23203166-23203330,23203627-23203693,23203771-232038...    29   1.7  
03_06_0109 - 31717691-31718311,31719110-31719223,31719316-317196...    28   5.2  
07_01_0184 - 1304328-1304951,1305328-1305441,1305549-1305839,130...    27   6.8  
03_02_1034 + 13555569-13556084,13556096-13556527                       27   6.8  
01_07_0310 + 42660671-42660795,42660996-42661026,42662958-426630...    27   6.8  
10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396           27   9.0  
08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135     27   9.0  
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806...    27   9.0  
03_05_0407 - 23906388-23906966,23907028-23907915,23908141-239087...    27   9.0  
02_05_0313 - 27795152-27795268,27795476-27795515,27795773-277958...    27   9.0  
01_06_0192 + 27347369-27348826,27349124-27349264,27349350-273510...    27   9.0  
01_05_0645 - 23899579-23904483                                         27   9.0  

>01_01_0645 +
           4890647-4890682,4891684-4891929,4892021-4892317,
           4892407-4892574,4892674-4892841,4892924-4893004,
           4893105-4893171,4893657-4893751,4894027-4894099,
           4894177-4894247,4894325-4894374,4895263-4895375,
           4895461-4895513
          Length = 505

 Score = 31.1 bits (67), Expect = 0.55
 Identities = 13/43 (30%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = +1

Query: 298 RKMLSYNQYNMDKYTYVPTALDMYTTCLRDPVF--WKIMKRVM 420
           R+M+SY+   +   TY+P  +++   C+R+P F  W++ +++M
Sbjct: 155 REMMSYSYAALK--TYMPEMVEVLIDCVRNPAFLDWEVKEQIM 195


>05_03_0619 +
           16274255-16274396,16274775-16274848,16275111-16276139,
           16276484-16276702,16277228-16277250,16277482-16277606,
           16279480-16279670,16280202-16280360,16281359-16281598
          Length = 733

 Score = 30.7 bits (66), Expect = 0.73
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
 Frame = -2

Query: 297 EHCHHMEHFGIVIGH-IHATEDKSGKHFHVFGFLQIDHGSI-TTFDFAC*DSFADHLLNI 124
           E CH M   GIV+GH +   EDK  + F ++ F  +D   I T F+ A    F++  L+I
Sbjct: 468 EKCHFMVREGIVLGHRVFEREDKIMEKFIIY-FFCLDLLKIQTKFNRAYLLQFSESKLHI 526

Query: 123 I 121
           I
Sbjct: 527 I 527


>07_03_0997 -
           23203166-23203330,23203627-23203693,23203771-23203862,
           23204820-23204956,23205050-23205116,23205212-23205278,
           23205356-23205441,23206061-23206153,23206337-23206522,
           23207316-23207372,23207455-23207582,23207662-23207731,
           23207815-23207950,23208378-23208529,23208606-23208680,
           23208765-23208929,23209063-23209128,23209229-23209333,
           23209929-23210132,23210462-23211715
          Length = 1123

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 103 KLKMLLDDVEQMIREGILTGKIERRDGTMINLKKPEDVEM-LARLILGGMNVANDDAKMF 279
           KL +LL + +QM++EG LT      D +  + KK  D  M   + IL  MN  +   +M 
Sbjct: 515 KLLVLLQNGKQMVQEGALTALASVADSSQEHFKKYYDAVMPYLKAIL--MNATDKSNRML 572

Query: 280 HMMTM 294
              +M
Sbjct: 573 RAKSM 577


>03_06_0109 -
           31717691-31718311,31719110-31719223,31719316-31719606,
           31719698-31720006,31720098-31720865
          Length = 700

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
 Frame = +1

Query: 310 SYNQYNMDKYTYVPTALDMYTTCLRDP-----VFWKIMKRVMNSFVLFKNMLPSYT 462
           SY  Y   ++ +    + ++  CL D      VFWK    +   F+L K +LP Y+
Sbjct: 464 SYEAYRKQQHRWHSGPMQLFRLCLPDIIKCKIVFWKKANLIFLFFLLRKLILPFYS 519


>07_01_0184 -
           1304328-1304951,1305328-1305441,1305549-1305839,
           1305930-1306238,1306326-1307048
          Length = 686

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
 Frame = +1

Query: 310 SYNQYNMDKYTYVPTALDMYTTCLRDPV-----FWKIMKRVMNSFVLFKNMLPSYT 462
           SY  Y   ++ +    + ++  CL D +     FWK    +   F+L K +LP Y+
Sbjct: 449 SYEAYRKQQHRWHSGPMQLFRLCLPDIIRCKIAFWKKANLIFLFFLLRKLILPFYS 504


>03_02_1034 + 13555569-13556084,13556096-13556527
          Length = 315

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +1

Query: 151 ILTGKIERRDGTMINLK---KPEDVEMLARLILGGMNVANDDA 270
           +L+G   R DG  ++ +    P D+  L R+ L G NV  D+A
Sbjct: 218 LLSGFATRSDGPELDDQLELTPRDIRRLVRMALKGKNVERDEA 260


>01_07_0310 +
           42660671-42660795,42660996-42661026,42662958-42663079,
           42663428-42663544,42663881-42663950
          Length = 154

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = +1

Query: 10  KNGYWPKIRLPNGDEMPVRQNNFVPVTSENLKLKMLLDDVEQMIRE 147
           K  +W ++     D  P   N  +PV + N K K       QM+R+
Sbjct: 100 KVNFWRRLSQMKADHEPSASNKRLPVINHNYKSKRYATLTPQMMRQ 145


>10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396
          Length = 1357

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 409 KRVMNSFVLFKNMLPSYTREELDFPG 486
           ++V+N+  L  N  PSY  + +D PG
Sbjct: 795 EQVVNTIYLHDNSFPSYLPKSMDLPG 820


>08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135
          Length = 1275

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 409  KRVMNSFVLFKNMLPSYTREELDFPG 486
            ++V+N+  L  N  PSY  + +D PG
Sbjct: 1152 EQVVNTIYLHDNSFPSYLPKSMDLPG 1177


>03_06_0362 +
           33379489-33379624,33380161-33380423,33380524-33380670,
           33380753-33380914,33381681-33381758,33382329-33382462,
           33382702-33382774,33382852-33382929,33383002-33383124,
           33383223-33383317,33383723-33383932,33384115-33384172,
           33384268-33384333
          Length = 540

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 115 LLDDVEQMIREGILTGKIERRDGTMINLKKPEDVEMLARL 234
           +LDD+E+ + +G+ T K   RD  +I      ++E+  RL
Sbjct: 382 ILDDLERAVDDGVNTYKSMCRDSRIIPGAAATEIELARRL 421


>03_05_0407 -
           23906388-23906966,23907028-23907915,23908141-23908753,
           23908858-23909021
          Length = 747

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +1

Query: 25  PKIRLPNGDEMPVRQNNFVPVTSENLKLKMLLDDVEQMIREGILTGKIER-RDGT 186
           PK R+P      V ++N VP+T + L  +   +D+E MI      G++++  DGT
Sbjct: 18  PKSRIPKLGGSEVHESNIVPITVDKLTPEQ-KNDLEAMISS--KDGEVQQVSDGT 69


>02_05_0313 -
           27795152-27795268,27795476-27795515,27795773-27795873,
           27796862-27796921,27797185-27797294,27797911-27798033,
           27798148-27798271,27798585-27798642,27798713-27798841,
           27799602-27799762
          Length = 340

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +1

Query: 301 KMLSYNQYNMDKYTYVPTALDMYTTCLRDPVFWKIMKRVMNSFVLFKNMLPSYTRE 468
           K L   Q N + Y  +PT    Y   + + VFW+  K      V FK +  S+ R+
Sbjct: 47  KFLEALQLNHNYYEMLPTYWSPYLHMIANNVFWR-TKNTAFVAVEFKYLYKSFDRD 101


>01_06_0192 +
           27347369-27348826,27349124-27349264,27349350-27351081,
           27353739-27354606,27354784-27355957
          Length = 1790

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 43  NGDEMPVRQNNFVPVTSENLKLKMLLDDVEQMIREGIL 156
           NGDE+P  +NN    T  + + + LL   EQ + E  L
Sbjct: 306 NGDELPCNENNAEDGTGSSHEHEHLLVQNEQTVEESNL 343


>01_05_0645 - 23899579-23904483
          Length = 1634

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 409  KRVMNSFVLFKNMLPSYTREELDFPG 486
            ++V+N+  L  N  PSY  + +D PG
Sbjct: 1072 EQVVNTIYLHDNSFPSYLPKSMDLPG 1097


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,844,081
Number of Sequences: 37544
Number of extensions: 272664
Number of successful extensions: 682
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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