BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0003_O04 (520 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,489... 31 0.55 05_03_0619 + 16274255-16274396,16274775-16274848,16275111-162761... 31 0.73 07_03_0997 - 23203166-23203330,23203627-23203693,23203771-232038... 29 1.7 03_06_0109 - 31717691-31718311,31719110-31719223,31719316-317196... 28 5.2 07_01_0184 - 1304328-1304951,1305328-1305441,1305549-1305839,130... 27 6.8 03_02_1034 + 13555569-13556084,13556096-13556527 27 6.8 01_07_0310 + 42660671-42660795,42660996-42661026,42662958-426630... 27 6.8 10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396 27 9.0 08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135 27 9.0 03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 27 9.0 03_05_0407 - 23906388-23906966,23907028-23907915,23908141-239087... 27 9.0 02_05_0313 - 27795152-27795268,27795476-27795515,27795773-277958... 27 9.0 01_06_0192 + 27347369-27348826,27349124-27349264,27349350-273510... 27 9.0 01_05_0645 - 23899579-23904483 27 9.0 >01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317, 4892407-4892574,4892674-4892841,4892924-4893004, 4893105-4893171,4893657-4893751,4894027-4894099, 4894177-4894247,4894325-4894374,4895263-4895375, 4895461-4895513 Length = 505 Score = 31.1 bits (67), Expect = 0.55 Identities = 13/43 (30%), Positives = 28/43 (65%), Gaps = 2/43 (4%) Frame = +1 Query: 298 RKMLSYNQYNMDKYTYVPTALDMYTTCLRDPVF--WKIMKRVM 420 R+M+SY+ + TY+P +++ C+R+P F W++ +++M Sbjct: 155 REMMSYSYAALK--TYMPEMVEVLIDCVRNPAFLDWEVKEQIM 195 >05_03_0619 + 16274255-16274396,16274775-16274848,16275111-16276139, 16276484-16276702,16277228-16277250,16277482-16277606, 16279480-16279670,16280202-16280360,16281359-16281598 Length = 733 Score = 30.7 bits (66), Expect = 0.73 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Frame = -2 Query: 297 EHCHHMEHFGIVIGH-IHATEDKSGKHFHVFGFLQIDHGSI-TTFDFAC*DSFADHLLNI 124 E CH M GIV+GH + EDK + F ++ F +D I T F+ A F++ L+I Sbjct: 468 EKCHFMVREGIVLGHRVFEREDKIMEKFIIY-FFCLDLLKIQTKFNRAYLLQFSESKLHI 526 Query: 123 I 121 I Sbjct: 527 I 527 >07_03_0997 - 23203166-23203330,23203627-23203693,23203771-23203862, 23204820-23204956,23205050-23205116,23205212-23205278, 23205356-23205441,23206061-23206153,23206337-23206522, 23207316-23207372,23207455-23207582,23207662-23207731, 23207815-23207950,23208378-23208529,23208606-23208680, 23208765-23208929,23209063-23209128,23209229-23209333, 23209929-23210132,23210462-23211715 Length = 1123 Score = 29.5 bits (63), Expect = 1.7 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Frame = +1 Query: 103 KLKMLLDDVEQMIREGILTGKIERRDGTMINLKKPEDVEM-LARLILGGMNVANDDAKMF 279 KL +LL + +QM++EG LT D + + KK D M + IL MN + +M Sbjct: 515 KLLVLLQNGKQMVQEGALTALASVADSSQEHFKKYYDAVMPYLKAIL--MNATDKSNRML 572 Query: 280 HMMTM 294 +M Sbjct: 573 RAKSM 577 >03_06_0109 - 31717691-31718311,31719110-31719223,31719316-31719606, 31719698-31720006,31720098-31720865 Length = 700 Score = 27.9 bits (59), Expect = 5.2 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 5/56 (8%) Frame = +1 Query: 310 SYNQYNMDKYTYVPTALDMYTTCLRDP-----VFWKIMKRVMNSFVLFKNMLPSYT 462 SY Y ++ + + ++ CL D VFWK + F+L K +LP Y+ Sbjct: 464 SYEAYRKQQHRWHSGPMQLFRLCLPDIIKCKIVFWKKANLIFLFFLLRKLILPFYS 519 >07_01_0184 - 1304328-1304951,1305328-1305441,1305549-1305839, 1305930-1306238,1306326-1307048 Length = 686 Score = 27.5 bits (58), Expect = 6.8 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 5/56 (8%) Frame = +1 Query: 310 SYNQYNMDKYTYVPTALDMYTTCLRDPV-----FWKIMKRVMNSFVLFKNMLPSYT 462 SY Y ++ + + ++ CL D + FWK + F+L K +LP Y+ Sbjct: 449 SYEAYRKQQHRWHSGPMQLFRLCLPDIIRCKIAFWKKANLIFLFFLLRKLILPFYS 504 >03_02_1034 + 13555569-13556084,13556096-13556527 Length = 315 Score = 27.5 bits (58), Expect = 6.8 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = +1 Query: 151 ILTGKIERRDGTMINLK---KPEDVEMLARLILGGMNVANDDA 270 +L+G R DG ++ + P D+ L R+ L G NV D+A Sbjct: 218 LLSGFATRSDGPELDDQLELTPRDIRRLVRMALKGKNVERDEA 260 >01_07_0310 + 42660671-42660795,42660996-42661026,42662958-42663079, 42663428-42663544,42663881-42663950 Length = 154 Score = 27.5 bits (58), Expect = 6.8 Identities = 13/46 (28%), Positives = 20/46 (43%) Frame = +1 Query: 10 KNGYWPKIRLPNGDEMPVRQNNFVPVTSENLKLKMLLDDVEQMIRE 147 K +W ++ D P N +PV + N K K QM+R+ Sbjct: 100 KVNFWRRLSQMKADHEPSASNKRLPVINHNYKSKRYATLTPQMMRQ 145 >10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396 Length = 1357 Score = 27.1 bits (57), Expect = 9.0 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = +1 Query: 409 KRVMNSFVLFKNMLPSYTREELDFPG 486 ++V+N+ L N PSY + +D PG Sbjct: 795 EQVVNTIYLHDNSFPSYLPKSMDLPG 820 >08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135 Length = 1275 Score = 27.1 bits (57), Expect = 9.0 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = +1 Query: 409 KRVMNSFVLFKNMLPSYTREELDFPG 486 ++V+N+ L N PSY + +D PG Sbjct: 1152 EQVVNTIYLHDNSFPSYLPKSMDLPG 1177 >03_06_0362 + 33379489-33379624,33380161-33380423,33380524-33380670, 33380753-33380914,33381681-33381758,33382329-33382462, 33382702-33382774,33382852-33382929,33383002-33383124, 33383223-33383317,33383723-33383932,33384115-33384172, 33384268-33384333 Length = 540 Score = 27.1 bits (57), Expect = 9.0 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +1 Query: 115 LLDDVEQMIREGILTGKIERRDGTMINLKKPEDVEMLARL 234 +LDD+E+ + +G+ T K RD +I ++E+ RL Sbjct: 382 ILDDLERAVDDGVNTYKSMCRDSRIIPGAAATEIELARRL 421 >03_05_0407 - 23906388-23906966,23907028-23907915,23908141-23908753, 23908858-23909021 Length = 747 Score = 27.1 bits (57), Expect = 9.0 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = +1 Query: 25 PKIRLPNGDEMPVRQNNFVPVTSENLKLKMLLDDVEQMIREGILTGKIER-RDGT 186 PK R+P V ++N VP+T + L + +D+E MI G++++ DGT Sbjct: 18 PKSRIPKLGGSEVHESNIVPITVDKLTPEQ-KNDLEAMISS--KDGEVQQVSDGT 69 >02_05_0313 - 27795152-27795268,27795476-27795515,27795773-27795873, 27796862-27796921,27797185-27797294,27797911-27798033, 27798148-27798271,27798585-27798642,27798713-27798841, 27799602-27799762 Length = 340 Score = 27.1 bits (57), Expect = 9.0 Identities = 17/56 (30%), Positives = 25/56 (44%) Frame = +1 Query: 301 KMLSYNQYNMDKYTYVPTALDMYTTCLRDPVFWKIMKRVMNSFVLFKNMLPSYTRE 468 K L Q N + Y +PT Y + + VFW+ K V FK + S+ R+ Sbjct: 47 KFLEALQLNHNYYEMLPTYWSPYLHMIANNVFWR-TKNTAFVAVEFKYLYKSFDRD 101 >01_06_0192 + 27347369-27348826,27349124-27349264,27349350-27351081, 27353739-27354606,27354784-27355957 Length = 1790 Score = 27.1 bits (57), Expect = 9.0 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +1 Query: 43 NGDEMPVRQNNFVPVTSENLKLKMLLDDVEQMIREGIL 156 NGDE+P +NN T + + + LL EQ + E L Sbjct: 306 NGDELPCNENNAEDGTGSSHEHEHLLVQNEQTVEESNL 343 >01_05_0645 - 23899579-23904483 Length = 1634 Score = 27.1 bits (57), Expect = 9.0 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = +1 Query: 409 KRVMNSFVLFKNMLPSYTREELDFPG 486 ++V+N+ L N PSY + +D PG Sbjct: 1072 EQVVNTIYLHDNSFPSYLPKSMDLPG 1097 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,844,081 Number of Sequences: 37544 Number of extensions: 272664 Number of successful extensions: 682 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 672 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 682 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1130733700 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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