Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_O03
(585 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 58 4e-09
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 57 9e-09
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 54 1e-07
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 53 1e-07
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 52 5e-07
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 51 6e-07
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 51 8e-07
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 51 8e-07
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 49 2e-06
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 48 6e-06
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 48 6e-06
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 48 6e-06
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 47 1e-05
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 47 1e-05
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 46 2e-05
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 46 2e-05
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 46 3e-05
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 46 3e-05
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 45 5e-05
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 44 7e-05
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 44 7e-05
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 44 9e-05
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 44 1e-04
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 43 2e-04
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 43 2e-04
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 42 3e-04
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 41 9e-04
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.003
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 39 0.003
SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40) 38 0.005
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.006
SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027) 37 0.011
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.018
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 35 0.043
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 35 0.056
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.074
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 33 0.23
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06) 32 0.40
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23) 30 1.6
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 29 2.8
SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 28 4.9
SB_57561| Best HMM Match : fn3 (HMM E-Value=0) 28 6.4
SB_49832| Best HMM Match : CXCXC (HMM E-Value=0.00036) 28 6.4
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 58.8 bits (136), Expect = 3e-09
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +3
Query: 249 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVT--GAILIEGTP 422
+IVGG+DT YPW V+I + CGGSLIS K+VLTAAHCVT ++ +
Sbjct: 107 RIVGGHDTVKGAYPWHVLIRKGGH----VACGGSLISEKWVLTAAHCVTHRNGNILPRSR 162
Query: 423 KNVRLGEYNTT 455
V+LG Y TT
Sbjct: 163 FQVQLGLYRTT 173
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 58.8 bits (136), Expect = 3e-09
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 201 LESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTA 380
+++N E CGV D+ +++V G+D + ++PW + +CGGSLI+ ++VLTA
Sbjct: 45 VQTNAEHCGVSDSASSRVVSGDDATLGEWPWQAWLHVTPHG---FVCGGSLIAPQWVLTA 101
Query: 381 AHCVTGAILIEGTPK-NVRLGEYNTTNNGPDCMKGTKDCAHPVVTAPIEKTIPHPDYIPN 557
HC IL E K V LG+ + D +G++ H + + I HP Y
Sbjct: 102 GHC----ILTEDPEKYRVVLGDVDR-----DTTEGSEQIFH------VRRIIKHPHY-SR 145
Query: 558 DVQGRHDIA 584
DV +D+A
Sbjct: 146 DVPYDNDVA 154
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 58.4 bits (135), Expect = 4e-09
Identities = 48/154 (31%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Frame = +3
Query: 78 VRQSVCNGPETFS---VCCGPPPEINPEDMTLNERCSRAVTAFPLESNNECCGVEDTVVN 248
+R CN P VC G E N E +RC P CGV + +
Sbjct: 381 LRSRKCNNPTPQGGGRVCAG---EGNQEKACNTQRCGAKPVLAPF-----ICGVRNAL-G 431
Query: 249 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV-------TGAIL 407
+IVGG K+ +PW ++ D ++CGGSLI+ ++V+TAAHC+ TG +
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDD--TIVCGGSLINREWVVTAAHCIDRNNPSRTGCV- 488
Query: 408 IEGTPKNVRLGEYNTT-NNGPDCMKGTKD-CAHP 503
+ P V LGE + T + G + + C HP
Sbjct: 489 VPDPPIRVILGESDVTKHEGNEIHRDVAQICIHP 522
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 57.2 bits (132), Expect = 9e-09
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 10/131 (7%)
Frame = +3
Query: 222 CGVEDTV---VNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 392
CG+ V + +IVGG T+ +PW V I Y++ H +CGGS+++S++++TAAHCV
Sbjct: 1770 CGIRPIVGSSLQQIVGGKVTEHGAWPWQVQIGYKTMGH---ICGGSIVNSQWIVTAAHCV 1826
Query: 393 T----GA---ILIEGTPKNVRLGEYNTTNNGPDCMKGTKDCAHPVVTAPIEKTIPHPDYI 551
T GA + + NV LGE+ + G++ PIE + HP Y
Sbjct: 1827 TTKPPGASRYTMYAFSDLNVTLGEHQLYQ-----LDGSEQ------NIPIEGIVVHPSY- 1874
Query: 552 PNDVQGRHDIA 584
ND+ +DIA
Sbjct: 1875 -NDLD--YDIA 1882
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +3
Query: 249 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVTGAILIEGTPKN 428
++VGG++ K Q+PW + + ++ + CGG+L+ ++V+T AHC + N
Sbjct: 28 RVVGGDEAKAGQFPWQIALLFKRQQY----CGGALVHERWVVTGAHCFNPYTSEDPRDWN 83
Query: 429 VRLGEYNTTNN 461
V LGEYN N
Sbjct: 84 VTLGEYNLAVN 94
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +3
Query: 222 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVTGA 401
CGV ++IVGGND ++PW ++ +++ K CGG+L+ +V+TA+HC+
Sbjct: 202 CGVRPPA-SRIVGGNDAMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCINDI 260
Query: 402 ILIEGTPKNVRLGEYNTT 455
+ + LG +N T
Sbjct: 261 RPEDYKTHIISLGGHNKT 278
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 222 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVTGA 401
CG ++++GG D +PW + ++ +CGGSL+SS +V+TAAHCV A
Sbjct: 467 CGYTPITQSRVIGGKDAIPGAWPWQIALKSRG----NFICGGSLVSSTWVVTAAHCV--A 520
Query: 402 ILIEGTPKNVRLGEYNTTNN--GPDCMKGTKDCAHPVVTAP 518
+ +GE+N N + + K AHP P
Sbjct: 521 RSSNPAQYQIIVGEHNRNVNEVTEETLNVKKVIAHPQYNNP 561
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Frame = +3
Query: 249 KIVGGNDTKITQYPWLVVIEYESF--DHMKLLCGGSLISSKYVLTAAHCV 392
+I GG+D+ YPW V +E+++F ++ CGG+LI+ +VLTAAHCV
Sbjct: 1160 RIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHCV 1209
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 51.6 bits (118), Expect = 5e-07
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +3
Query: 210 NNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 389
N E CG + +++ G++ + ++PW + + H +CGGSL++ +VLTAAHC
Sbjct: 18 NLETCGRAEVPATRVISGSEALLGEWPWQAWLHLQ---HTGFICGGSLVAPGWVLTAAHC 74
Query: 390 V 392
+
Sbjct: 75 I 75
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +3
Query: 249 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 392
+I+ G+D + +PW+V I Y + H CGG+L+S ++V+TAAHCV
Sbjct: 351 RIISGSDAQPNSWPWMVQINYNNGHH----CGGTLVSPQWVVTAAHCV 394
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 50.8 bits (116), Expect = 8e-07
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
Frame = +3
Query: 138 EINPEDMTLNERCSRAVTAFPL-ESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYE 314
+I +D+T+ +R FP ++ CGV + +IVGG K +PW +
Sbjct: 629 DIAIDDVTIKSCATRP--PFPTTQAPVASCGVRPST--RIVGGTAAKQGDWPWQAQLRST 684
Query: 315 SFDHMKLLCGGSLISSKYVLTAAHCVTGAILIEGTPKNVRLGEYN-TTNNGPD-CMKGTK 488
S CGGSLI ++VLTA HCV+ T N+RLG +N N G + +K K
Sbjct: 685 SGFPF---CGGSLIHPQWVLTATHCVSSR---RPTDLNIRLGAHNRRANLGMEQDIKVEK 738
Query: 489 DCAHPVVTAPI 521
HP P+
Sbjct: 739 IIMHPGYRKPV 749
Score = 41.9 bits (94), Expect = 4e-04
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 336 LCGGSLISSKYVLTAAHCVTGAILIEGTPK-NVRLGEYNTTNNGPDCMKGTKDCAHPVVT 512
+CGGSL+S +V+TAAHC+ G+ TP V GE+ N P+ GT+ T
Sbjct: 92 ICGGSLVSPTWVVTAAHCIAGS---SHTPSYKVVTGEH--IRNSPE---GTEQ------T 137
Query: 513 APIEKTIPHPDYIPNDVQGRHDIA 584
+++ I HP Y N Q +DIA
Sbjct: 138 HDVKRIITHPTY--NSPQLSNDIA 159
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 50.8 bits (116), Expect = 8e-07
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 147 PEDMTLNERCSRAVTAFPLESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDH 326
PE+ L +R V F N CG + ++++ G D +PW + + S
Sbjct: 5 PENTLLTHPRNR-VQGFFFREKNPACGQRPSQ-SRVINGVDATAHAWPWQISLRMMSKKG 62
Query: 327 MKL-LCGGSLISSKYVLTAAHCVTG 398
CGGSLI S++VLTAAHCV G
Sbjct: 63 DDYHFCGGSLIDSEWVLTAAHCVAG 87
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Frame = +3
Query: 171 RCSRAVTAF-PLESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGG 347
RC F P + CG +++IVGG+ +PW V++ Y S + CGG
Sbjct: 605 RCGNYTPTFRPTPPHVPVCGHRP--LSRIVGGSTAPPGAWPWQVMLIYNSG---RQFCGG 659
Query: 348 SLISSKYVLTAAHCVTGAILIEGTPKN--VRLGEYNTTNNGP 467
+L++ ++V+TAAHCV ++ P + VRLG + T+ P
Sbjct: 660 TLVTPEWVITAAHCV-----VDKNPASIQVRLGAQDRTSPDP 696
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +3
Query: 222 CGVEDTVVN-KIVGGNDTKITQYPWLV-VIEYESFDHMKLLCGGSLISSKYVLTAAHC 389
CG T + +IVGGN+ +PW V + ++ + +CGG+LI+ ++VLTAAHC
Sbjct: 116 CGESQTNLRARIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHC 173
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 48.0 bits (109), Expect = 6e-06
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Frame = +3
Query: 222 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKL--LCGGSLISSKYVLTAAHCVT 395
CG + +IVGG K +PW + + Y K +CGGS+++ ++++TAAHC
Sbjct: 94 CGTKGKGNTRIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCF- 152
Query: 396 GAILIEGTPKNVRLGEYNTTNNGPDCMKGTKDCAHPVVTAPIEKTIPHPDYIPND 560
A + + +GE++ N D + D +E+ I HP Y P++
Sbjct: 153 -AYSKDAKDYTIAVGEHDL--NATDGYEQRPD---------VERIILHPKYAPHN 195
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +3
Query: 222 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 389
CG++ T + I+GG D + ++PW V + H +CGG+L++S++VLTAA C
Sbjct: 250 CGIKYT--SNIIGGTDAAVGEWPWQVSLY---LTHYGPVCGGTLLTSEWVLTAARC 300
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 48.0 bits (109), Expect = 6e-06
Identities = 27/69 (39%), Positives = 38/69 (55%)
Frame = +3
Query: 249 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVTGAILIEGTPKN 428
+IVGG + K +PWL I + CGG+LI+ +V+TAAHC I +
Sbjct: 723 RIVGGREAKAGAWPWLAAIYVKG----SFRCGGALIARDWVVTAAHCFYYDGKIVPSDIL 778
Query: 429 VRLGEYNTT 455
VRLGE++ T
Sbjct: 779 VRLGEHDRT 787
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 47.6 bits (108), Expect = 7e-06
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +3
Query: 198 PLESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLT 377
PL +N CG + +I+ G + + +PW + + S H CGGSLIS ++V+T
Sbjct: 89 PLPPSNGKCGRKPAGA-RIINGQNAQPHSWPWQISLRGRSGFHT---CGGSLISDRWVVT 144
Query: 378 AAHCV 392
AAHC+
Sbjct: 145 AAHCI 149
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 249 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAA 383
+I+ G + + +PW + + S H CGGSLIS ++V+TAA
Sbjct: 428 RIINGQNAQPHSWPWQISLRGRSGFHT---CGGSLISDRWVVTAA 469
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/71 (29%), Positives = 40/71 (56%)
Frame = +3
Query: 180 RAVTAFPLESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLIS 359
+A +A ++ +++ CG + ++V G++ + +PW V + CGG+LI
Sbjct: 20 QARSARSIDIDSDKCGQRSILEKRVVSGSEVEPQSWPWQVHLLQSRDGSFLHKCGGALID 79
Query: 360 SKYVLTAAHCV 392
++V+TAAHCV
Sbjct: 80 REWVVTAAHCV 90
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = +3
Query: 249 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVTGA--ILIEGTP 422
+IVGG + +PW V + H CGGSLI ++V+T+ HC I +
Sbjct: 249 RIVGGREASPNSWPWQVDLVVNGTRHN---CGGSLIDKQWVVTSGHCFDQRPYAYIPLSY 305
Query: 423 KNVRLGEY--NTTNNGPDCMKGTKDCAHP 503
RLGE+ +TT + +KG K HP
Sbjct: 306 YEFRLGEHRESTTEGWEEIIKGEKLFIHP 334
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 339 CGGSLISSKYVLTAAHCVTGAILIEGTPKNVRLGEYN 449
CGGSLI ++LT++HC I T +RLGE++
Sbjct: 15 CGGSLIDPYWILTSSHCFWTYNNI-STQFEIRLGEHD 50
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 46.4 bits (105), Expect = 2e-05
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +3
Query: 222 CGVEDTVVNKIVGGNDTKITQYPW-LVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVTG 398
CGV+ ++IVGG + I +PW +++ + D CGGSLI +VLTAAHC+ G
Sbjct: 21 CGVKPGG-SRIVGGTEAPINGWPWQAMLLRSPNGDQF---CGGSLIDPGWVLTAAHCLVG 76
Query: 399 AILIEGTPKNVRLGEYNTTNNGPDCMKGTKDCAHPVVTAPIEKTIPHPDYIPNDVQGRHD 578
P + LG + +N K K + + IPH +Y + ++ +D
Sbjct: 77 E-----QPDSALLGAHYRSNKTVGTEKDIK----------VAQIIPHKNY-HSPIEMAND 120
Query: 579 IA 584
IA
Sbjct: 121 IA 122
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Frame = +3
Query: 246 NKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVTGAILIEGTPK 425
++IVGG + +PW V I ++ + CGGSLI ++LT++HC I T
Sbjct: 244 SRIVGGREAPRNSWPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNI-STQF 302
Query: 426 NVRLGEYNTT--NNGPDCMKGTKDCAHP 503
+RLGE++ + ++G K HP
Sbjct: 303 EIRLGEHDVRKYEGFEEIIQGDKLYIHP 330
Score = 36.3 bits (80), Expect = 0.018
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +3
Query: 339 CGGSLISSKYVLTAAHCVTGA--ILIEGTPKNVRLGEY--NTTNNGPDCMKGTKDCAHP 503
CGGSLI ++V+T+ HC I + RLGE+ +TT + +KG K HP
Sbjct: 561 CGGSLIDKQWVVTSGHCFDQRPYAYIPLSYYEFRLGEHRESTTEGWEEIIKGEKLFIHP 619
Score = 30.7 bits (66), Expect = 0.91
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 339 CGGSLISSKYVLTAAHCV 392
CGGS+I +V+TA HCV
Sbjct: 10 CGGSIIDPHWVVTAGHCV 27
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 249 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVTGAI 404
+++GG D +PW + + K +CGG+LIS +VLTA HCV G +
Sbjct: 435 RVIGGEDAAPHSWPWQISLRVRG----KHMCGGTLISPDWVLTAGHCVHGQL 482
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +3
Query: 249 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 392
+I+ G + + +PW + + H LCGG+LIS ++V+TA+HC+
Sbjct: 845 RIINGQNAQPHSWPWQISLRQGRRFH---LCGGALISDRWVVTASHCI 889
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/66 (34%), Positives = 39/66 (59%)
Frame = +3
Query: 195 FPLESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVL 374
F L ++E CG + +++V G++ +PW + + + +CGGSLI+ ++VL
Sbjct: 63 FALLGSSEGCG-QRPFQSRVVNGDNAAQHSWPWQISLRVNG----RHICGGSLITPEWVL 117
Query: 375 TAAHCV 392
TAAHCV
Sbjct: 118 TAAHCV 123
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/82 (30%), Positives = 42/82 (51%)
Frame = +3
Query: 222 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVTGA 401
CG +++V G++ + +PW + + + +CGGSLI+ +V+TAAHCV
Sbjct: 22 CGKRPYGTSRVVNGDNAQQHSWPWQISLRVNG----RHICGGSLIAKDWVVTAAHCVDRN 77
Query: 402 ILIEGTPKNVRLGEYNTTNNGP 467
G V +G ++ T N P
Sbjct: 78 PTPSG--YTVVVGAHHRTGNTP 97
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 45.6 bits (103), Expect = 3e-05
Identities = 32/104 (30%), Positives = 53/104 (50%)
Frame = +3
Query: 252 IVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVTGAILIEGTPKNV 431
I+GG + + ++PW V ++ S + +CGG++IS +VLTAAHCV + +
Sbjct: 546 IMGGANAEHGEWPWQVSMKLNS-SSLPHICGGNVISPWWVLTAAHCVQDE---RASNIKL 601
Query: 432 RLGEYNTTNNGPDCMKGTKDCAHPVVTAPIEKTIPHPDYIPNDV 563
+GE+ N + GT+ P+E+ I H +Y N V
Sbjct: 602 TMGEWRLFN-----VDGTEQ------VIPVERIISHANYSYNTV 634
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 243 VNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 392
+++++GG + +PW V + CGG+LISSK+V+TAAHCV
Sbjct: 474 MSRVIGGEAARPYSWPWQVSVSMGKLHS----CGGALISSKWVITAAHCV 519
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 222 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYES-FDHMKLLCGGSLISSKYVLTAAHCVTG 398
CG+ +IVGG K +PW + S F + CGGSLI +++LTA HCV+G
Sbjct: 46 CGIRPHT--RIVGGTAAKQNSWPWQAQLRTTSGFPY----CGGSLIHPQWILTATHCVSG 99
Query: 399 AILIEGTPKNVRL 437
+NV L
Sbjct: 100 KSASSIVIRNVNL 112
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/49 (36%), Positives = 32/49 (65%)
Frame = +3
Query: 246 NKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 392
++IVGG + +PW ++ Y + +H CGG+L+ ++V+TA+HCV
Sbjct: 247 SRIVGGTTAQRGAWPWQAMLRYYNGNHF---CGGTLVHPRWVVTASHCV 292
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3
Query: 249 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 389
+I+GG + I Q+PW+V + +S CGGSL+ +++TAAHC
Sbjct: 40 RIMGGQRSTIEQHPWMVAMMLDSAQ----ACGGSLVPEDWIVTAAHC 82
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 44.4 bits (100), Expect = 7e-05
Identities = 26/62 (41%), Positives = 35/62 (56%)
Frame = +3
Query: 207 SNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAH 386
S CG V +IVGG++ +PW V I + H +CGGSL+S ++LTAAH
Sbjct: 17 SEASSCGRRPDGV-RIVGGDEAVPHSWPWQVSIRLKG-SH---ICGGSLLSPLWLLTAAH 71
Query: 387 CV 392
CV
Sbjct: 72 CV 73
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 44.4 bits (100), Expect = 7e-05
Identities = 47/157 (29%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Frame = +3
Query: 108 TFSVCCG-----PPPEINPEDMTL--NERCSRAVTAFPLESNNECCGVEDT--VVNKIVG 260
T CCG PP I +D+ NER P NN C +++ VV +VG
Sbjct: 1033 TAVTCCGAFVHDPPSNIWLDDVRCRGNERSIFRCAHRPWGINN--CNMKELAGVVCHLVG 1090
Query: 261 GNDTKITQYPW-LVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVTGAILIEGTPKNVRL 437
+ +PW +++ F C G LIS+++V+TAAHC +I VRL
Sbjct: 1091 ATPSPPEDWPWQTMILNRRRFP----FCSGVLISARHVITAAHCFDR--IIRTDQIIVRL 1144
Query: 438 GEYNTTNNGPDCMKGTKDCAHPVVTAPIEKTIPHPDY 548
G Y + D G++ + A I K HP Y
Sbjct: 1145 GAYIARSGRLDWGMGSR-WEQEIAVAAIHK---HPSY 1177
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 44.0 bits (99), Expect = 9e-05
Identities = 28/88 (31%), Positives = 41/88 (46%)
Frame = +3
Query: 129 PPPEINPEDMTLNERCSRAVTAFPLESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIE 308
PPP T +RA P + CG + + +IVGG + + +PW ++
Sbjct: 183 PPPTTTAAITTKVPVTTRAPITQPPSGS---CGSKPSGT-RIVGGTEAPVNGWPWQAMLR 238
Query: 309 YESFDHMKLLCGGSLISSKYVLTAAHCV 392
CGGSLI ++VLTAAHC+
Sbjct: 239 SAGGSQF---CGGSLIHPEWVLTAAHCL 263
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 222 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYES-FDHMKLLCGGSLISSKYVLTAAHCVT 395
CGV + ++IVGG +PW + + F + CGGSLI S +VLTAAHC++
Sbjct: 382 CGVSSST-SRIVGGAAANPGDWPWQAQLRTTTGFPY----CGGSLIHSNWVLTAAHCIS 435
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +3
Query: 249 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 392
+IVGG + + +PW ++ CGGSLI ++VLTAAHC+
Sbjct: 259 RIVGGTEAPVNGWPWQAMLRSAGGSQF---CGGSLIHPEWVLTAAHCL 303
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 219 CCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 392
CCG +++V G + +PW + + H +CGGSLI+ ++VLTAAHCV
Sbjct: 28 CCG-RRPASSRVVNGANAPQHAWPWQISLRTNG-QH---ICGGSLITPEWVLTAAHCV 80
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 222 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYES-FDHMKLLCGGSLISSKYVLTAAHCV 392
CG+ +IVGG K +PW + S F + CGGSLI+ +++LTA HCV
Sbjct: 3 CGIRPNT--RIVGGTAAKHGDWPWQAQLRTTSGFPY----CGGSLIAPQWILTATHCV 54
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +3
Query: 243 VNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVTGAILIEGTP 422
+++I+GG +PW I CGG+LI +++V+TAAHCV IE +
Sbjct: 282 MSRIIGGTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHCVFQN--IEPSN 339
Query: 423 KNVRLGEYN 449
++LG ++
Sbjct: 340 YKIKLGAHD 348
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 41.5 bits (93), Expect = 5e-04
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Frame = +3
Query: 96 NGPETFSVCCGPPPEINPEDMTLNERCSRAVTAFPLESNNEC------CGVEDTVVNKIV 257
N +T C PPP P T+ T P + CG + +IV
Sbjct: 84 NCKKTCGTCGDPPPPATPPPPTMPPTPPPPQTPAPPGPDTPAPPAPGGCGAKPHT--RIV 141
Query: 258 GGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 392
GG +PW ++ ++ CGG+L+ ++V+TAAHCV
Sbjct: 142 GGTKAPPGAWPWQAMLRS---NYGGQFCGGTLVHPQWVITAAHCV 183
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 222 CGVED-TVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 389
CG + T +IVGG ++ +PW + H CGGS+I S++V+TAAHC
Sbjct: 16 CGRKTYTRKRRIVGGIESANGAWPWQAALFLNGTHHR---CGGSVIKSQWVVTAAHC 69
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +3
Query: 231 EDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVT 395
E T +IV G D +PW + Y+ H +CG SL++ + LTAAHC+T
Sbjct: 234 EKTPPLRIVNGEDAVPHSWPWQLSFRYKG-SH---ICGASLLTPGWALTAAHCLT 284
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +3
Query: 249 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 392
+++ G + + +PW + + H CGG+LIS ++V+TA+HCV
Sbjct: 29 RVINGQNAQPHSWPWQISLRPYGRYHS---CGGTLISDRWVVTASHCV 73
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 249 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 392
+IV G + +PW+ + ++ CG +LI + +TAAHCV
Sbjct: 325 RIVNGQEAVSHSWPWIASLRKGRSNYHT--CGATLIRPGWAITAAHCV 370
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 38.7 bits (86), Expect = 0.003
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +3
Query: 222 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVTGA 401
CG++ + +IVGG +PW + S CGG+L+ ++V+TA+HC+
Sbjct: 16 CGMKPST--RIVGGTAAPKNAWPWQAQLRSASGFPF---CGGTLVHPRFVVTASHCID-- 68
Query: 402 ILIEGTPKN--VRLGEYNTTNNG 464
+ TP + +RLG + +G
Sbjct: 69 ---KKTPSSLRIRLGAHRRAESG 88
>SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40)
Length = 607
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +3
Query: 228 VEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV-TGAI 404
V + V +IVGG + +PW I Y+ L G+LI S++VLT A+ V G
Sbjct: 85 VNSSRVRRIVGGKISAKAAWPWQAAIYYKDRGR-NFLFNGALIKSRWVLTVANAVLRGGR 143
Query: 405 LIEGTPKNVRLGEYNTTNNGPDCMKG 482
I+ V LG+ G +C G
Sbjct: 144 PIKPRKLKVILGKLKGGRRG-ECYHG 168
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +3
Query: 336 LCGGSLISSKYVLTAAHCV 392
+CGGSL+SS +VLTAAHCV
Sbjct: 339 ICGGSLLSSTWVLTAAHCV 357
>SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027)
Length = 379
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +3
Query: 309 YESFDHMKLLCGGSLISSKYVLTAAHCVTGAILIEGTPKNVRLG 440
+ S H+ C G+LIS+++VLT+AHCV + + K+V++G
Sbjct: 169 FSSIVHISTGCTGTLISTRHVLTSAHCVHDSSEYIISAKSVKVG 212
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 36.3 bits (80), Expect = 0.018
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 249 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 389
+IVGG + +PW V + CGGSL++ +V+TA HC
Sbjct: 53 RIVGGVEAAPGAWPWQVALLMNGTQ----FCGGSLVNENWVVTARHC 95
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 35.1 bits (77), Expect = 0.043
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 249 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 389
+IVGG + +PW V + + +C GSLI +++++TA HC
Sbjct: 53 RIVGGVVSSEGLWPWQVALLLND----RQVCAGSLIEARWIITAGHC 95
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 34.7 bits (76), Expect = 0.056
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 249 KIVGGNDTKITQYPWLVVIE-YESFDHMKLLCGGSLISSKYVLTAAHCV 392
+I+ G + +PW + + Y S + CG SL+S + LTAAHCV
Sbjct: 85 RIINGEEAVPNSWPWQLSLRVYGSHN-----CGASLLSPGWALTAAHCV 128
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 34.3 bits (75), Expect = 0.074
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 285 YPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 389
+PW V + + CGG+LI++ +VLTAAHC
Sbjct: 1250 WPWQVALTLSGNPVQR--CGGALIAADWVLTAAHC 1282
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 258 GGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV-TGAILIEGTPKNVR 434
G +PW ++ + F ++ C G+L+ ++++T AHC+ GA ++ V
Sbjct: 667 GWQPAHANSWPWTALLHFGGFLDIEG-CMGTLVDQEWIMTTAHCLHVGAYQLQPQFIKVE 725
Query: 435 LG 440
LG
Sbjct: 726 LG 727
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 339 CGGSLISSKYVLTAAHCV-TGAILIEGTPKNVRLG 440
C G+L+S ++VLTAAHC+ TG +G + +R+G
Sbjct: 168 CTGTLVSPRHVLTAAHCLHTGRDYTKGF-RTLRVG 201
>SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06)
Length = 379
Score = 31.9 bits (69), Expect = 0.40
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 339 CGGSLISSKYVLTAAHCV 392
C G+LIS ++VLT+AHCV
Sbjct: 168 CSGTLISRQHVLTSAHCV 185
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 31.1 bits (67), Expect = 0.69
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 339 CGGSLISSKYVLTAAHCVTGAILIEGTPKNVRLG 440
C G L+ K+VLTAAHCV P N+++G
Sbjct: 124 CTGVLVGPKHVLTAAHCVANE-----KPHNLKVG 152
>SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23)
Length = 1178
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 435 LGEYNTTNNGPDCMKGTKDCAHPVVTAPIEKTIPHPDYIPNDVQGRH 575
L +Y+ PD K K HP + +K + HPD D+Q RH
Sbjct: 1012 LYKYDKQARHPDLCKYDKQVRHPDMYK-YDKQVRHPDMCKYDIQVRH 1057
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3
Query: 435 LGEYNTTNNGPDCMKGTKDCAHPVVTAPIEKTIPHPDYIPNDVQGRH 575
L +Y+ PD K K HP + +K + HPD D Q RH
Sbjct: 976 LCKYDKQVRHPDMCKYDKQVRHPDM-CKYDKQVRHPDLYKYDKQARH 1021
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 339 CGGSLISSKYVLTAAHCVTGAILIEGTPKNVRLGEYNTTN 458
C G+LI +V+TAAHC+ + +G NT++
Sbjct: 153 CSGTLIGPCHVITAAHCIHNGKWFVSPLTAILVGVSNTSS 192
>SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 330 KLLCGGSLISSKYVLTAAHCV 392
+L C G+L+S ++V+TAA C+
Sbjct: 49 ELQCSGALVSPRWVVTAASCL 69
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = -3
Query: 445 YSPKRTFFGVPSIKIAPVTQCAAVSTYFELMSEPPHSSFI*SKLSYSITTSHGYWVIFVS 266
Y+P ++ PS P + ++Y S P S+ S SY+ TTS+ + S
Sbjct: 110 YTPTPSYTPTPSY--TPTPSYTSTTSYTPTTSYTPTPSYT-STTSYTSTTSYTSTTSYTS 166
Query: 265 FPPTILLTTVSSTPQHS 215
P T+ +ST ++
Sbjct: 167 TPSYTSTTSYTSTTSYT 183
>SB_57561| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1614
Score = 27.9 bits (59), Expect = 6.4
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = -3
Query: 421 GVPSIKIAPVTQCAAVSTYFELMSEPPHSSFI*SKL-SYSITTSHGYWVIFVSFPPTILL 245
GVPS +T ST L PP F+ KL Y++T + F T+++
Sbjct: 646 GVPSKPPQSLTAHNTSSTTLALSFRPPEKYFVNGKLRGYNVTWRETLLLDAEVFSRTVIV 705
Query: 244 TTVSSTPQHSLLLSSGKAVT---ALEHLSLRVISSGFISGGGPQHTLNVS 104
T+ + + ++ S +++ ++ + + + F G GP +N +
Sbjct: 706 TSSAKRRRRAVATSDQESLQLDGLKKYTTYTITVAAFTIGDGPFLEVNAT 755
>SB_49832| Best HMM Match : CXCXC (HMM E-Value=0.00036)
Length = 242
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = +3
Query: 339 CGGSLISSKYVLTAAHCVTGAILI----EGTPKNVRLGEYNTTNNGPDCMKGTKDCA 497
CGG + S +LT + + + + E T VRL YN T C DC+
Sbjct: 55 CGGGCLGSPKILTCRNISSEEVFVDVLDEITLSMVRLKMYNHTKCNCGCTTSPMDCS 111
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,228,831
Number of Sequences: 59808
Number of extensions: 460249
Number of successful extensions: 1404
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1410146228
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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