Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_N24
(386 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56655| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 1e-12
SB_24582| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.020
SB_30473| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.0
SB_11110| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_52316| Best HMM Match : Fun_ATP-synt_8 (HMM E-Value=8) 29 1.8
SB_15331| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 28 2.3
SB_19792| Best HMM Match : SspH (HMM E-Value=6.6) 28 2.3
SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0) 27 4.0
SB_11254| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_7748| Best HMM Match : DUF229 (HMM E-Value=4.5e-10) 27 5.3
SB_2894| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_38495| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_42273| Best HMM Match : 7tm_1 (HMM E-Value=5.2e-07) 26 9.3
SB_40533| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.3
SB_41532| Best HMM Match : Extensin_2 (HMM E-Value=1.4) 26 9.3
SB_41146| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.3
SB_26934| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 26 9.3
SB_15859| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.3
SB_1812| Best HMM Match : 7tm_1 (HMM E-Value=6.7e-07) 26 9.3
SB_1163| Best HMM Match : DMA (HMM E-Value=1.4e-11) 26 9.3
>SB_56655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 68.9 bits (161), Expect = 1e-12
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +2
Query: 62 EAFFDEYDYYNFDHDKHIFTGHGGKQRTKREATEHTNHFDPSGHSRKIVTKLVNTENNK 238
E +FDEYDYYNFD +++ G+ K R+KREA +TN F P GH RK++ K NTE N+
Sbjct: 2 EPYFDEYDYYNFD--RNVVEGNTRKGRSKREACLNTNRFCPGGHERKVLEKYRNTEKNR 58
>SB_24582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 69
Score = 35.1 bits (77), Expect = 0.020
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 74 DEYDYYNFDHDKHIFTGHGGKQRTKREATEHTNHFDPSGHS-RKIVTKLVNTENNKKSNK 250
D+YD Y+FD H G K ++K+EA+++ N GHS RK + + E+ +K K
Sbjct: 5 DKYDDYDFDERLH--EGGARKGKSKKEASQNKN-VSTQGHSERKAAEYIQHGEDKRKEEK 61
>SB_30473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 29.5 bits (63), Expect = 1.0
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 125 HGGKQRTKREATEH--TNHFDPSGHSRKIVTKLVNTENNKKSN 247
HG K++ KR EH NH D S ++K+ +K N KSN
Sbjct: 191 HGAKRKRKRTKDEHKVVNHADGSDDAKKLHSK--TDTNPSKSN 231
>SB_11110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 28.7 bits (61), Expect = 1.8
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 50 VTMSEAFFDEYDYYNFDHDKHI 115
V+ +AF+ +DYY F HD ++
Sbjct: 508 VSEGKAFYGSFDYYQFPHDSNL 529
>SB_52316| Best HMM Match : Fun_ATP-synt_8 (HMM E-Value=8)
Length = 420
Score = 28.7 bits (61), Expect = 1.8
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 50 VTMSEAFFDEYDYYNFDHDKHI 115
V+ +AF+ +DYY F HD ++
Sbjct: 66 VSEGKAFYGSFDYYQFPHDSNL 87
>SB_15331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 119 TGHGGKQRTKREATEHTNHFDPSGHSRKIVTKLVNTENNKKSNK 250
+G GK+ K E N +P +KI T+ V NK+ +K
Sbjct: 18 SGSSGKEMRKISTEEKPNQSEPPKKVKKIKTEKVEKTTNKQQSK 61
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 28.3 bits (60), Expect = 2.3
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 92 NFDHDKHIFTGHGGKQRTKREATEHTNHF-DPSGHSRKIVTKLVNTENNKKSN 247
N D + I HGG+ +T + D SGHS T +NT N+ + N
Sbjct: 292 NKDITQEIMARHGGQSAGTPSSTGSPSTTPDASGHSSNSNTPPINTNNSAEQN 344
>SB_19792| Best HMM Match : SspH (HMM E-Value=6.6)
Length = 244
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +2
Query: 101 HDKHIFTGHGGKQRTKREATEHTNHFDP----SGHSRKIVTKLVN 223
H I+T H +T R T+H N+ + H+ +I T LVN
Sbjct: 45 HAARIYTNHVNDSQTARIYTQHVNYSQTARIYTQHAARIYTNLVN 89
>SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0)
Length = 1291
Score = 27.5 bits (58), Expect = 4.0
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = -3
Query: 300 IFLLQAIVVFIHRYIYCLLDFLLFSVFTNFVTIF------LEC-PEGSK*FVCSVASRLV 142
I + ++FI + +L +FSV F+T+F L C P S CS +S L+
Sbjct: 1159 ITVFSVTILFITVFSVIILFITVFSVIILFITVFSIIILLLPCSPSSSFSLPCSPSSFLL 1218
Query: 141 RCLP 130
C P
Sbjct: 1219 PCSP 1222
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = -3
Query: 339 IRHNVLLSLGNSVIFLL---QAIVVFIHRYIYCLLDFLLFSVFTNFVTIF 199
+RH+ +++ + +I + I++FI + +L +FSV F+T+F
Sbjct: 1103 LRHHPFITVFSVIILFITVFSVIILFITVFSVIILFITVFSVIILFITVF 1152
>SB_11254| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 27.1 bits (57), Expect = 5.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 80 YDYYNFDHDKHIFTGHGGKQR 142
YDY + D+D H + GKQR
Sbjct: 17 YDYVDLDNDSHDYETMNGKQR 37
>SB_7748| Best HMM Match : DUF229 (HMM E-Value=4.5e-10)
Length = 784
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 142 YQAGGHRTHESLRPLWTFQKDRHEVSEYGEQ 234
+QA G T E+LRPL++ + H G Q
Sbjct: 244 FQAVGQHTFENLRPLFSGRTANHSADSLGIQ 274
>SB_2894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 27.1 bits (57), Expect = 5.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 80 YDYYNFDHDKHIFTGHGGKQR 142
YDY + D+D H + GKQR
Sbjct: 103 YDYVDLDNDSHDYETMNGKQR 123
>SB_38495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 95
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 128 GGKQRTKREATEHTNHFDPSGHSRKIVTKLVNT 226
GGKQ EA E SG SR++V + VNT
Sbjct: 29 GGKQTEIAEAREKLAILVASGKSREMVARHVNT 61
>SB_42273| Best HMM Match : 7tm_1 (HMM E-Value=5.2e-07)
Length = 259
Score = 26.2 bits (55), Expect = 9.3
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 281 MACRRNITELPSERRTLWR 337
+ CRRN LPSE R WR
Sbjct: 236 LLCRRNNNILPSESRGPWR 254
>SB_40533| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 26.2 bits (55), Expect = 9.3
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 183 PLDIPEXXXXXXXXXXTTKSPINNRCNGE*TRLWLVEGILPSCLAK 320
PL IP +T+ NNRCN E T L G P+ L +
Sbjct: 151 PLAIPYSLALRIRRICSTEESFNNRCN-ELTNYLLKRGYKPAFLKR 195
>SB_41532| Best HMM Match : Extensin_2 (HMM E-Value=1.4)
Length = 1633
Score = 26.2 bits (55), Expect = 9.3
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +2
Query: 98 DHDKHIFTGHGGKQRTKREATEHTNHFDPSGHSRKIVTKLVNTENNK 238
++ + I GG K + + T F P+ SRK KL +++ ++
Sbjct: 1294 ENSQTITRERGGDDNCKSSSLQRTEDFSPAQFSRKSPRKLTSSKGSQ 1340
>SB_41146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 26.2 bits (55), Expect = 9.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 211 RDDLSGMSRGVEVIRVFGGLPLGTLFTSVSGEN 113
RDD+S +RGV + GT+ +V GE+
Sbjct: 687 RDDISSRTRGVTSHKTSTASEAGTVIVNVEGEH 719
>SB_26934| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 1443
Score = 26.2 bits (55), Expect = 9.3
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 183 PLDIPEXXXXXXXXXXTTKSPINNRCNGE*TRLWLVEGILPSCLAK 320
PL IP +T+ NNRCN E T L G P+ L +
Sbjct: 386 PLAIPYSLALRIRRICSTEESFNNRCN-ELTNYLLKRGYKPAFLKR 430
>SB_15859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 26.2 bits (55), Expect = 9.3
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 98 DHDKHIFTGHGGKQRTKREATEHTNHFDPSGH 193
DH+ H GHGG++ R+ + GH
Sbjct: 916 DHEGHKGNGHGGRKGKGRKGRKDKGRMGRKGH 947
>SB_1812| Best HMM Match : 7tm_1 (HMM E-Value=6.7e-07)
Length = 259
Score = 26.2 bits (55), Expect = 9.3
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 281 MACRRNITELPSERRTLWR 337
+ CRRN LPSE R WR
Sbjct: 236 LLCRRNNNILPSESRGPWR 254
>SB_1163| Best HMM Match : DMA (HMM E-Value=1.4e-11)
Length = 403
Score = 26.2 bits (55), Expect = 9.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 328 RPPFARQLGNIPSTSHSRVYSP 263
R P AR L P+ S SR+Y+P
Sbjct: 309 RAPIARPLPTSPACSTSRIYTP 330
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,853,899
Number of Sequences: 59808
Number of extensions: 232338
Number of successful extensions: 662
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 669365910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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