Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_N24
(386 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22181-7|CAA80189.2| 62|Caenorhabditis elegans Hypothetical pr... 31 0.21
AF022976-4|AAC69083.2| 345|Caenorhabditis elegans Serpentine re... 28 2.6
Z81540-12|CAB04396.2| 149|Caenorhabditis elegans Hypothetical p... 27 3.5
U88308-3|AAB42329.2| 430|Caenorhabditis elegans Resistance to i... 27 6.1
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 27 6.1
U41993-5|AAA83447.2| 451|Caenorhabditis elegans Hypothetical pr... 27 6.1
AF038604-2|AAB92013.1| 468|Caenorhabditis elegans Hypothetical ... 27 6.1
AF022971-9|AAG23978.2| 345|Caenorhabditis elegans Serpentine re... 27 6.1
Z68295-1|CAA92587.1| 325|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical pr... 26 8.1
AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane... 26 8.1
>Z22181-7|CAA80189.2| 62|Caenorhabditis elegans Hypothetical
protein ZK632.9 protein.
Length = 62
Score = 31.5 bits (68), Expect = 0.21
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 128 GGKQRTKREATEHTNHFDPSGHSRKIVTKLVNTENNKK 241
G +RTK + EH + P G +RK+V N E +K
Sbjct: 23 GSGKRTKSDRVEHKHASQPGGDTRKVVQTASNGEAKRK 60
>AF022976-4|AAC69083.2| 345|Caenorhabditis elegans Serpentine
receptor, class h protein37 protein.
Length = 345
Score = 27.9 bits (59), Expect = 2.6
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -1
Query: 257 SIVYWTFCCSPYSL 216
SI+Y+TFCC P+S+
Sbjct: 253 SILYFTFCCVPFSV 266
>Z81540-12|CAB04396.2| 149|Caenorhabditis elegans Hypothetical
protein F46B3.15 protein.
Length = 149
Score = 27.5 bits (58), Expect = 3.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 204 IFLECPEGSK*FVCSVASRLVRCLPPCPVKMC 109
+F CP+ S V ++ V PPC +K C
Sbjct: 88 VFTTCPKMSSCIVVDGKAKCVPRSPPCTIKQC 119
>U88308-3|AAB42329.2| 430|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 19 protein.
Length = 430
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +2
Query: 80 YDYYNFDHDKHIFTGHGGKQRTKREATEHTNHFDPSGHSRKIVTKLVNTEN 232
Y+ Y+F+ H+ TG ++ K E E P G+ ++ L E+
Sbjct: 265 YNNYDFEILSHLATGTKPERERKSEKEESAKTSQPRGNEEELKNLLFGRES 315
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 104 DKHIFTGHGGKQRTKREATEHTNHFDPSGHSRKIVTK 214
++ + HG R KR + EH H DP H+ K T+
Sbjct: 78 EEEVEISHGMHHREKRHS-EHLPHPDPPSHTAKRSTE 113
>U41993-5|AAA83447.2| 451|Caenorhabditis elegans Hypothetical
protein F44A2.2 protein.
Length = 451
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 5 SSALIVFCTYNLFTNVTMSEAFFDEYDYYNFDHDKHIF 118
+S L VFC + +T +AFF+ Y F+ IF
Sbjct: 50 TSRLAVFCEKSHVERLTDCDAFFESTSEYYFERSPIIF 87
>AF038604-2|AAB92013.1| 468|Caenorhabditis elegans Hypothetical
protein B0546.3 protein.
Length = 468
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 300 IFLLQAIVVFIHRYIYCLLDFLLFSVFTNFVTIFLEC 190
IFL+ IV+F Y+Y F + F++F +F+ C
Sbjct: 407 IFLVANIVIFHSFYLYFPRFFQVSHNFSSFSVLFIYC 443
>AF022971-9|AAG23978.2| 345|Caenorhabditis elegans Serpentine
receptor, class h protein38 protein.
Length = 345
Score = 26.6 bits (56), Expect = 6.1
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = -1
Query: 257 SIVYWTFCCSPYSL 216
+I+Y+TFCC P+S+
Sbjct: 253 AILYFTFCCVPFSV 266
>Z68295-1|CAA92587.1| 325|Caenorhabditis elegans Hypothetical
protein C07C7.1 protein.
Length = 325
Score = 26.2 bits (55), Expect = 8.1
Identities = 8/24 (33%), Positives = 18/24 (75%)
Frame = -3
Query: 315 LGNSVIFLLQAIVVFIHRYIYCLL 244
LG+ IFLL ++++++ +YC++
Sbjct: 143 LGSLYIFLLDYLLIYLYFQVYCVM 166
>Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical
protein T24C2.1 protein.
Length = 711
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 369 AGQRPAASSGIRHNVLLSLGNSVIFLLQAIVVFIHRY 259
+ QR SG+ H +L+ S+I + I +F++RY
Sbjct: 623 SSQRQCKWSGVEHLLLIWSFASLIVWMMLIALFLYRY 659
>AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane
protein RAM-5 protein.
Length = 711
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 369 AGQRPAASSGIRHNVLLSLGNSVIFLLQAIVVFIHRY 259
+ QR SG+ H +L+ S+I + I +F++RY
Sbjct: 623 SSQRQCKWSGVEHLLLIWSFASLIVWMMLIALFLYRY 659
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,723,911
Number of Sequences: 27780
Number of extensions: 174528
Number of successful extensions: 502
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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