Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N23
         (467 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7KTB0 Cluster: CG18507-PA, isoform A; n=3; Sophophora|...    34   1.3  
UniRef50_Q4SE57 Cluster: Chromosome undetermined SCAF14625, whol...    33   2.4  
UniRef50_Q893I6 Cluster: DNA topoisomerase I; n=6; Firmicutes|Re...    32   5.4  
UniRef50_Q0V9V5 Cluster: Putative uncharacterized protein MGC145...    31   9.5  
UniRef50_Q89FR7 Cluster: Blr6632 protein; n=7; Proteobacteria|Re...    31   9.5  
UniRef50_Q3JB87 Cluster: Outer membrane efflux protein; n=1; Nit...    31   9.5  
UniRef50_Q24G83 Cluster: Putative uncharacterized protein; n=1; ...    31   9.5  

>UniRef50_Q7KTB0 Cluster: CG18507-PA, isoform A; n=3;
           Sophophora|Rep: CG18507-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 514

 Score = 34.3 bits (75), Expect = 1.3
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +3

Query: 24  YHFVVYTDIYKYFLILQYFCLKTALLKLIYSGIKGIPTQALQV 152
           Y F VY   YK  L+       T LL L++SG++G+   AL V
Sbjct: 281 YRFTVYNICYKRILVCWILFAFTVLLALLFSGLQGVALFALGV 323


>UniRef50_Q4SE57 Cluster: Chromosome undetermined SCAF14625, whole
           genome shotgun sequence; n=2; cellular organisms|Rep:
           Chromosome undetermined SCAF14625, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 2042

 Score = 33.5 bits (73), Expect = 2.4
 Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = -1

Query: 275 G*LICSSVSSPCSARVPPIFW-CPSRV 198
           G L CS +  PCS+RVPP+F  C SRV
Sbjct: 210 GVLRCSPMFLPCSSRVPPVFLSCSSRV 236


>UniRef50_Q893I6 Cluster: DNA topoisomerase I; n=6; Firmicutes|Rep:
           DNA topoisomerase I - Clostridium tetani
          Length = 721

 Score = 32.3 bits (70), Expect = 5.4
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -3

Query: 429 MDLLYKITNRHIDLKLDDQYSL*RITMNFPE 337
           MDL+Y+ TNR ++L   D   L +I +N PE
Sbjct: 592 MDLIYEFTNRAVELIKSDNSMLNKIKINLPE 622


>UniRef50_Q0V9V5 Cluster: Putative uncharacterized protein
           MGC145952; n=1; Xenopus tropicalis|Rep: Putative
           uncharacterized protein MGC145952 - Xenopus tropicalis
           (Western clawed frog) (Silurana tropicalis)
          Length = 416

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -1

Query: 254 VSSPCSARVPPIFWCPSRVGAPSDAPYNPTPSTKDLQCLSWNPFYTRVYQ 105
           VS   S+   PI + P R G+ S   YNP    K+ Q  +W+  Y  +Y+
Sbjct: 361 VSGTISSENVPIVYFPKRYGSHSSMKYNP----KEKQIYAWDDGYQMLYK 406


>UniRef50_Q89FR7 Cluster: Blr6632 protein; n=7; Proteobacteria|Rep:
           Blr6632 protein - Bradyrhizobium japonicum
          Length = 554

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 21/74 (28%), Positives = 32/74 (43%)
 Frame = +3

Query: 33  VVYTDIYKYFLILQYFCLKTALLKLIYSGIKGIPTQALQVFSAGCRVVGGVARSANSRRA 212
           V YT   +Y  +LQY+ L+   L L + G   +        +    V     R+A   +A
Sbjct: 466 VKYTTPSRYNWMLQYY-LRAEGLALSWVGTGRLIFSLNYTDADFTEVAERFIRAAGKMKA 524

Query: 213 PEYWWHTGATRARN 254
             +WWH GA   +N
Sbjct: 525 DGFWWHDGALTNKN 538


>UniRef50_Q3JB87 Cluster: Outer membrane efflux protein; n=1;
           Nitrosococcus oceani ATCC 19707|Rep: Outer membrane
           efflux protein - Nitrosococcus oceani (strain ATCC 19707
           / NCIMB 11848)
          Length = 472

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -3

Query: 414 KITNRHIDLKLDDQYSL*RITMNFPEAHVPSNGDYIVMAEYS 289
           +I  R   +KL+   ++  IT+NF      +NGDY VMA  S
Sbjct: 303 EIAQRQAFIKLEKSKAIPDITVNFGGTEYANNGDYAVMAGIS 344


>UniRef50_Q24G83 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 536

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -3

Query: 123 LYQSISISAKLFLNRNTVILRSICRYQYILQSDNNNN 13
           L+QSIS   +L L+R    L   C   YI+Q + NN+
Sbjct: 343 LHQSISYGLQLLLDRKQGYLWQYCTRYYIMQDNRNNH 379


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,430,668
Number of Sequences: 1657284
Number of extensions: 9262170
Number of successful extensions: 26845
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26705
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)