Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N23
         (467 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    31   2.6  
BC091523-1|AAH91523.1|  269|Homo sapiens KIAA1549 protein protein.     29   8.0  
BC038232-1|AAH38232.1|  826|Homo sapiens Unknown (protein for IM...    29   8.0  
AY424277-1|AAR04783.1|  191|Homo sapiens protein tyrosine phosph...    29   8.0  
AL109658-8|CAI22735.1|  207|Homo sapiens PTPN1L protein.               29   8.0  
AL109658-7|CAI22734.1|  342|Homo sapiens PTPN1L protein.               29   8.0  
AB046769-1|BAB13375.2| 1865|Homo sapiens KIAA1549 protein protein.     29   8.0  

>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 15  YYYYHFVVYTDIYKYFLILQYFCLKTALLKLIY 113
           Y Y +F ++T IY Y  I  Y CL   L   +Y
Sbjct: 34  YLYIYFYIFTYIYLYIFIYIYICLYIYLYIYLY 66


>BC091523-1|AAH91523.1|  269|Homo sapiens KIAA1549 protein protein.
          Length = 269

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = -1

Query: 197 GAPSDAPYNPTPSTKDLQCLSWNPFYTRVYQFQQSC 90
           G P   P N TPS ++ +   W  FY+        C
Sbjct: 32  GVPPGLPANSTPSQEERRATQWGSFYSPAQTANNPC 67


>BC038232-1|AAH38232.1|  826|Homo sapiens Unknown (protein for
           IMAGE:5741123) protein.
          Length = 826

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = -1

Query: 197 GAPSDAPYNPTPSTKDLQCLSWNPFYTRVYQFQQSC 90
           G P   P N TPS ++ +   W  FY+        C
Sbjct: 589 GVPPGLPANSTPSQEERRATQWGSFYSPAQTANNPC 624


>AY424277-1|AAR04783.1|  191|Homo sapiens protein tyrosine
           phosphatase non-receptor type substrate protein protein.
          Length = 191

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -1

Query: 266 ICSSVSSP-CSARVPPIFWCPSRVGAPSDA 180
           +CS++S+P C A +PP F   + V  PSDA
Sbjct: 1   MCSTMSAPTCLAHLPPCFLLLALVLVPSDA 30


>AL109658-8|CAI22735.1|  207|Homo sapiens PTPN1L protein.
          Length = 207

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -1

Query: 266 ICSSVSSP-CSARVPPIFWCPSRVGAPSDA 180
           +CS++S+P C A +PP F   + V  PSDA
Sbjct: 1   MCSTMSAPTCLAHLPPCFLLLALVLVPSDA 30


>AL109658-7|CAI22734.1|  342|Homo sapiens PTPN1L protein.
          Length = 342

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -1

Query: 266 ICSSVSSP-CSARVPPIFWCPSRVGAPSDA 180
           +CS++S+P C A +PP F   + V  PSDA
Sbjct: 1   MCSTMSAPTCLAHLPPCFLLLALVLVPSDA 30


>AB046769-1|BAB13375.2| 1865|Homo sapiens KIAA1549 protein protein.
          Length = 1865

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = -1

Query: 197  GAPSDAPYNPTPSTKDLQCLSWNPFYTRVYQFQQSC 90
            G P   P N TPS ++ +   W  FY+        C
Sbjct: 1644 GVPPGLPANSTPSQEERRATQWGSFYSPAQTANNPC 1679


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,973,483
Number of Sequences: 237096
Number of extensions: 1440430
Number of successful extensions: 3100
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3100
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)