Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N23
         (467 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119123-1|AAM50983.1|  514|Drosophila melanogaster RE25285p pro...    34   0.083
AE014134-2380|AAN10839.1|  514|Drosophila melanogaster CG18507-P...    34   0.083
AE014134-2379|AAF53321.2|  513|Drosophila melanogaster CG18507-P...    34   0.083

>AY119123-1|AAM50983.1|  514|Drosophila melanogaster RE25285p
           protein.
          Length = 514

 Score = 34.3 bits (75), Expect = 0.083
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +3

Query: 24  YHFVVYTDIYKYFLILQYFCLKTALLKLIYSGIKGIPTQALQV 152
           Y F VY   YK  L+       T LL L++SG++G+   AL V
Sbjct: 281 YRFTVYNICYKRILVCWILFAFTVLLALLFSGLQGVALFALGV 323


>AE014134-2380|AAN10839.1|  514|Drosophila melanogaster CG18507-PA,
           isoform A protein.
          Length = 514

 Score = 34.3 bits (75), Expect = 0.083
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +3

Query: 24  YHFVVYTDIYKYFLILQYFCLKTALLKLIYSGIKGIPTQALQV 152
           Y F VY   YK  L+       T LL L++SG++G+   AL V
Sbjct: 281 YRFTVYNICYKRILVCWILFAFTVLLALLFSGLQGVALFALGV 323


>AE014134-2379|AAF53321.2|  513|Drosophila melanogaster CG18507-PB,
           isoform B protein.
          Length = 513

 Score = 34.3 bits (75), Expect = 0.083
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +3

Query: 24  YHFVVYTDIYKYFLILQYFCLKTALLKLIYSGIKGIPTQALQV 152
           Y F VY   YK  L+       T LL L++SG++G+   AL V
Sbjct: 281 YRFTVYNICYKRILVCWILFAFTVLLALLFSGLQGVALFALGV 323


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,247,975
Number of Sequences: 53049
Number of extensions: 422672
Number of successful extensions: 960
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)