Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N22
         (505 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   5.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.6  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -2

Query: 396 FFQSNLIKYHLSSGIPIVTNLDPVAGFEILL 304
           ++   ++ + L +G P  T  DP+  + I+L
Sbjct: 548 YWSLGVLMFELLTGTPPFTGGDPMKTYNIIL 578


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 363 SSGIPIVTNLDPVAGFEIL 307
           SSG  ++  LD +A  EIL
Sbjct: 732 SSGTTLLLELDDIASMEIL 750


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1

Query: 373 IPSQQWDPNRNQPRSCCWVRD 311
           +P +     + Q  +CCWV D
Sbjct: 451 LPCEPGMIKKQQGDTCCWVCD 471


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1

Query: 373 IPSQQWDPNRNQPRSCCWVRD 311
           +P +     + Q  +CCWV D
Sbjct: 541 LPCEPGMIKKQQGDTCCWVCD 561


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,505
Number of Sequences: 438
Number of extensions: 2258
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)