Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N21
         (553 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)              45   4e-05
SB_45124| Best HMM Match : Sulfatase (HMM E-Value=0.17)                44   8e-05
SB_54172| Best HMM Match : Sulfatase (HMM E-Value=0.00035)             44   1e-04
SB_4686| Best HMM Match : No HMM Matches (HMM E-Value=.)               44   1e-04
SB_39420| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   3e-04
SB_42161| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   4e-04
SB_23990| Best HMM Match : DUF1677 (HMM E-Value=1.7)                   38   0.007
SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05)              35   0.038
SB_38453| Best HMM Match : Sulfatase (HMM E-Value=3.1e-06)             34   0.067
SB_21537| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.27 
SB_55212| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.1  
SB_44464| Best HMM Match : Adaptin_N (HMM E-Value=0)                   29   1.9  
SB_20630| Best HMM Match : rve (HMM E-Value=2.3e-19)                   29   3.3  
SB_46388| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.4  
SB_11110| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  
SB_52316| Best HMM Match : Fun_ATP-synt_8 (HMM E-Value=8)              28   5.8  

>SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1240

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 30/102 (29%), Positives = 46/102 (45%)
 Frame = +2

Query: 20  VSKPFNLENINLRNDIRVHCNIDRIGRPICYPRNGTVCLYNIKEDPCETKELSSLYPDLV 199
           + KP  L N  +   I+    +     P+C P+    CL+NIK DPCE   L++  P+ +
Sbjct: 545 IRKPRLLSNATVDCTIKSPHPLLYTHAPLCNPQKKP-CLFNIKWDPCEYHNLAAFMPNTL 603

Query: 200 KNMTDRLDLEKLKTIPRIIPLYRDPRSSPRFFNYTWATFADN 325
           K + DRL        P I P   D  ++P      W  + D+
Sbjct: 604 KVLLDRLKFYAEGMKPVIYP-RADDLANPDRLGGVWTPWKDD 644


>SB_45124| Best HMM Match : Sulfatase (HMM E-Value=0.17)
          Length = 418

 Score = 44.0 bits (99), Expect = 8e-05
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = +2

Query: 104 ICYPRNGTVCLYNIKEDPCETKELSSLYPDLVKNMTDRL 220
           IC  +NG  CL++I++DPCE  ++S  YP++   +  RL
Sbjct: 268 ICDSKNGAACLFDIEKDPCEYHDISKDYPEVTARLQKRL 306


>SB_54172| Best HMM Match : Sulfatase (HMM E-Value=0.00035)
          Length = 492

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 21/68 (30%), Positives = 37/68 (54%)
 Frame = +2

Query: 107 CYPRNGTVCLYNIKEDPCETKELSSLYPDLVKNMTDRLDLEKLKTIPRIIPLYRDPRSSP 286
           C   +G  CL++++EDPCE  +LS+  P+++  M  RL+  K   +P   P   +  ++P
Sbjct: 327 CDSSDGKFCLFDMEEDPCEYHDLSNQLPEVLAEMKTRLEYYKNIALPPWFPPI-NKAANP 385

Query: 287 RFFNYTWA 310
             F   W+
Sbjct: 386 ANFGGFWS 393


>SB_4686| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 641

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 21/68 (30%), Positives = 37/68 (54%)
 Frame = +2

Query: 107 CYPRNGTVCLYNIKEDPCETKELSSLYPDLVKNMTDRLDLEKLKTIPRIIPLYRDPRSSP 286
           C   +G  CL++++EDPCE  +LS+  P+++  M  RL+  K   +P   P   +  ++P
Sbjct: 476 CDSSDGKFCLFDMEEDPCEYHDLSNQLPEVLAEMKTRLEYYKNIALPPWFPPI-NKAANP 534

Query: 287 RFFNYTWA 310
             F   W+
Sbjct: 535 ANFGGFWS 542


>SB_39420| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 993

 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 21/51 (41%), Positives = 29/51 (56%)
 Frame = +2

Query: 128  VCLYNIKEDPCETKELSSLYPDLVKNMTDRLDLEKLKTIPRIIPLYRDPRS 280
            V LYNI  DP E  +LS  +PD+V  M  R+D  +   +P II    DP++
Sbjct: 929  VALYNITADPTERHDLSGKFPDIVNEMKKRVDFYRGGLVPPIIK-KNDPKA 978


>SB_42161| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 111

 Score = 41.5 bits (93), Expect = 4e-04
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +2

Query: 131 CLYNIKEDPCETKELSSLYPDLVKNMTDRLDLEKLKTIP-RIIPLYRDPRSSPRFFNYTW 307
           CL+NIK DPCE   L+    +++ NM   L+  K   +P R  PL  DP ++P  +   W
Sbjct: 44  CLFNIKNDPCEYVNLAKKELEILNNMLIWLEGYKKGMVPIRNTPL--DPSANPANYGGVW 101

Query: 308 ATFAD 322
             + D
Sbjct: 102 TAWKD 106


>SB_23990| Best HMM Match : DUF1677 (HMM E-Value=1.7)
          Length = 493

 Score = 37.5 bits (83), Expect = 0.007
 Identities = 18/65 (27%), Positives = 32/65 (49%)
 Frame = +2

Query: 131 CLYNIKEDPCETKELSSLYPDLVKNMTDRLDLEKLKTIPRIIPLYRDPRSSPRFFNYTWA 310
           CL+++  DPCE   ++     +V+ +  RL   + K  P   P  RDP ++P   +  W 
Sbjct: 163 CLFDLDSDPCEYNNIAEDNLPIVRKLLKRLTKHQKKARPVWFP-ERDPEANPANLDGFWG 221

Query: 311 TFADN 325
            + +N
Sbjct: 222 PWKEN 226


>SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05)
          Length = 492

 Score = 35.1 bits (77), Expect = 0.038
 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 128 VCLYNIKEDPCETKELSSLYPDLVKNMTDRL-DLEKLKTIPRIIPLYRDPRS 280
           + LYNI  DP E  +LS L PD+V ++  RL +L       R+ P   DPRS
Sbjct: 394 LALYNITADPEERNDLSKLNPDIVDSLWRRLQELNATSLEYRLQP--EDPRS 443


>SB_38453| Best HMM Match : Sulfatase (HMM E-Value=3.1e-06)
          Length = 473

 Score = 34.3 bits (75), Expect = 0.067
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +2

Query: 128 VCLYNIKEDPCETKELSSLYPDLVKNMTDRLDLEKLKTIP 247
           V LYNI  DP E  ++S   PD+V  +  RLD      +P
Sbjct: 342 VALYNITADPEERHDMSKKLPDVVAKLRQRLDYYMSGAVP 381


>SB_21537| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 77

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +2

Query: 119 NGTV--CLYNIKEDPCETKELSSLYPDLVKNMTDRLD 223
           N T+   LYNI  DP E  +LS+  PD+V  +  R+D
Sbjct: 1   NNTIKEALYNITADPEERHDLSTELPDVVARLRQRID 37


>SB_55212| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 138

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 128 VCLYNIKEDPCETKELSSLYPDLVKNMTDRLDLEKLKTIP 247
           V LYNI  DP E  +L    PD+V  +  R++  +   +P
Sbjct: 38  VALYNITADPYEKHDLHDKLPDVVTRLQLRVEHYRKTAVP 77


>SB_44464| Best HMM Match : Adaptin_N (HMM E-Value=0)
          Length = 596

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/24 (58%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
 Frame = +2

Query: 167 KELSSLYPDLVKNM-TDRLDLEKL 235
           K++SSL+PD+V  M TD L+L+KL
Sbjct: 45  KDVSSLFPDVVNCMQTDNLELKKL 68


>SB_20630| Best HMM Match : rve (HMM E-Value=2.3e-19)
          Length = 698

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 16/81 (19%), Positives = 41/81 (50%)
 Frame = +2

Query: 122 GTVCLYNIKEDPCETKELSSLYPDLVKNMTDRLDLEKLKTIPRIIPLYRDPRSSPRFFNY 301
           GT+   ++    C+ +E S+++  L+    + + + + +T  ++ P  R+P  +  F N 
Sbjct: 269 GTIHEDHLGITKCQGRESSTVWWPLITKQIEAM-VNRYQTCAKLRPARREPLMALSFPNL 327

Query: 302 TWATFADNL*SMCLFYFVVVI 364
           TW+    +L  +    +++V+
Sbjct: 328 TWSRVGTDLFELEQTDYLIVV 348


>SB_46388| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1084

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 332 SMCLFYFVVVIVKICALCTSYLIFFF 409
           S  LF FVVV+V + A+ TS L  FF
Sbjct: 38  SRLLFGFVVVLVVLLAVATSILAIFF 63


>SB_11110| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 862

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +2

Query: 188 PDLVKNMTDRLDLEKLKTIPRIIPLYRDPRSSPRFFNYTWATFADNL 328
           PDLVK    +LD E+LKT    IP Y    + P+  + TW  + + +
Sbjct: 650 PDLVKPTLKKLDFERLKT---DIPKYEG--NIPQSASTTWTNWLNRI 691


>SB_52316| Best HMM Match : Fun_ATP-synt_8 (HMM E-Value=8)
          Length = 420

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +2

Query: 188 PDLVKNMTDRLDLEKLKTIPRIIPLYRDPRSSPRFFNYTWATFADNL 328
           PDLVK    +LD E+LKT    IP Y    + P+  + TW  + + +
Sbjct: 208 PDLVKPTLKKLDFERLKT---DIPKYEG--NIPQSASTTWTNWLNRI 249


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,441,882
Number of Sequences: 59808
Number of extensions: 310402
Number of successful extensions: 638
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)