Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N21
         (553 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74032-7|CAD54140.1|  330|Caenorhabditis elegans Hypothetical pr...    32   0.32 
U37548-2|ABK57090.1|  452|Caenorhabditis elegans Sulfatase domai...    31   0.73 
U37548-1|AAA79198.2|  488|Caenorhabditis elegans Sulfatase domai...    31   0.73 
Z72502-15|CAN86590.1|  540|Caenorhabditis elegans Hypothetical p...    28   3.9  
Z72502-14|CAA96584.2|  536|Caenorhabditis elegans Hypothetical p...    28   3.9  
Z83123-6|CAD45601.1|  327|Caenorhabditis elegans Hypothetical pr...    28   5.1  
AF040660-8|AAN65288.1|  594|Caenorhabditis elegans Hypothetical ...    28   5.1  
AF040660-5|AAC71149.1|  651|Caenorhabditis elegans Hypothetical ...    28   5.1  
Z82051-1|CAB04815.1|  350|Caenorhabditis elegans Hypothetical pr...    27   6.8  
AF125459-9|AAD12845.2|  328|Caenorhabditis elegans Serpentine re...    27   9.0  
AF039719-8|AAO12411.1|  338|Caenorhabditis elegans Mutator prote...    27   9.0  
AF039719-7|AAB96748.1|  441|Caenorhabditis elegans Mutator prote...    27   9.0  

>Z74032-7|CAD54140.1|  330|Caenorhabditis elegans Hypothetical
           protein F35B12.9 protein.
          Length = 330

 Score = 31.9 bits (69), Expect = 0.32
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +2

Query: 212 DRLDLEKLKTIPRIIPLYRD--PRSSPRFFNYTWATFADNL*SMCLFYFVVVIVKICALC 385
           D+ ++EK + +P IIP Y D  P S+ +F  + + TF   + S+ +  FV    K    C
Sbjct: 237 DKKNIEKHEDMPPIIPSYHDSEPSSTSQFLYFNFNTFDILVLSVLIAAFVFATKKAYTKC 296


>U37548-2|ABK57090.1|  452|Caenorhabditis elegans Sulfatase domain
           protein protein3, isoform b protein.
          Length = 452

 Score = 30.7 bits (66), Expect = 0.73
 Identities = 19/78 (24%), Positives = 40/78 (51%)
 Frame = +2

Query: 83  IDRIGRPICYPRNGTVCLYNIKEDPCETKELSSLYPDLVKNMTDRLDLEKLKTIPRIIPL 262
           +  + R +   +N T  L+ I  DP E+K+++   P +V+ +  +LD  K K + + +  
Sbjct: 371 VGNVDRKMSKDKNRTR-LFRITTDPTESKDIARSNPKIVRRLLAKLDQLK-KFLHKNVRK 428

Query: 263 YRDPRSSPRFFNYTWATF 316
                 SP  FN +++++
Sbjct: 429 PLSLNGSPERFNGSYSSY 446


>U37548-1|AAA79198.2|  488|Caenorhabditis elegans Sulfatase domain
           protein protein3, isoform a protein.
          Length = 488

 Score = 30.7 bits (66), Expect = 0.73
 Identities = 19/78 (24%), Positives = 40/78 (51%)
 Frame = +2

Query: 83  IDRIGRPICYPRNGTVCLYNIKEDPCETKELSSLYPDLVKNMTDRLDLEKLKTIPRIIPL 262
           +  + R +   +N T  L+ I  DP E+K+++   P +V+ +  +LD  K K + + +  
Sbjct: 407 VGNVDRKMSKDKNRTR-LFRITTDPTESKDIARSNPKIVRRLLAKLDQLK-KFLHKNVRK 464

Query: 263 YRDPRSSPRFFNYTWATF 316
                 SP  FN +++++
Sbjct: 465 PLSLNGSPERFNGSYSSY 482


>Z72502-15|CAN86590.1|  540|Caenorhabditis elegans Hypothetical
           protein C08B6.1b protein.
          Length = 540

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +2

Query: 176 SSLYPDLVKNMTDRLDL-EKLK-TIPRIIPLY 265
           S+ YP L+  MTD++ L E++K  I  +IP+Y
Sbjct: 190 STFYPALISPMTDKMTLVERIKNAIQMLIPVY 221


>Z72502-14|CAA96584.2|  536|Caenorhabditis elegans Hypothetical
           protein C08B6.1a protein.
          Length = 536

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +2

Query: 176 SSLYPDLVKNMTDRLDL-EKLK-TIPRIIPLY 265
           S+ YP L+  MTD++ L E++K  I  +IP+Y
Sbjct: 190 STFYPALISPMTDKMTLVERIKNAIQMLIPVY 221


>Z83123-6|CAD45601.1|  327|Caenorhabditis elegans Hypothetical
           protein T04A11.12 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 334 NVFVLFCCGYS*DLCVMYFLLDFFFQKFP 420
           NV++L     S  +C+++FL DF + + P
Sbjct: 67  NVYLLSAISISQCMCLLFFLADFLYLRLP 95


>AF040660-8|AAN65288.1|  594|Caenorhabditis elegans Hypothetical
           protein W05G11.6d protein.
          Length = 594

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 16/52 (30%), Positives = 21/52 (40%)
 Frame = +2

Query: 185 YPDLVKNMTDRLDLEKLKTIPRIIPLYRDPRSSPRFFNYTWATFADNL*SMC 340
           Y D+V  + +R  L  LK          DPR   R  + TW    D   S+C
Sbjct: 70  YDDIVDKLVERGVLTPLKAYENNYLCRTDPRDVARVESKTWMVTKDKYDSVC 121


>AF040660-5|AAC71149.1|  651|Caenorhabditis elegans Hypothetical
           protein W05G11.6a protein.
          Length = 651

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 16/52 (30%), Positives = 21/52 (40%)
 Frame = +2

Query: 185 YPDLVKNMTDRLDLEKLKTIPRIIPLYRDPRSSPRFFNYTWATFADNL*SMC 340
           Y D+V  + +R  L  LK          DPR   R  + TW    D   S+C
Sbjct: 70  YDDIVDKLVERGVLTPLKAYENNYLCRTDPRDVARVESKTWMVTKDKYDSVC 121


>Z82051-1|CAB04815.1|  350|Caenorhabditis elegans Hypothetical
           protein T23D5.1 protein.
          Length = 350

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
 Frame = +2

Query: 275 RSSPRFFNYTWATFADNL*SMCLFYFVVVIVKICALCTSYLIFFFRNFQFA--KGYVILK 448
           RSS        A ++    ++  F  +  I ++C L    L+ +FR ++F    GYV + 
Sbjct: 81  RSSKAITEMLLAIYSAVYAAILSFLTIQYIYRVCVLRCPQLVQYFRGWRFILWLGYVFMF 140

Query: 449 *LMWKL--YFLKNSDSF 493
            L W +  YF    D +
Sbjct: 141 GLAWGVITYFYAYPDEY 157


>AF125459-9|AAD12845.2|  328|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 22 protein.
          Length = 328

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 22/86 (25%), Positives = 36/86 (41%)
 Frame = +2

Query: 275 RSSPRFFNYTWATFADNL*SMCLFYFVVVIVKICALCTSYLIFFFRNFQFAKGYVILK*L 454
           RS+  ++ YT         S+   +F  +++++  LCT    FFF      K Y      
Sbjct: 63  RSNSFYYLYTSEAIMSIYDSLVAAFFSRLVLRVSPLCTILSPFFFTPSIITKAYYAT--Y 120

Query: 455 MWKLYFLKNSDSFFSFNSIGLKLILP 532
            + L F   S    SFN +   ++LP
Sbjct: 121 NYNLAFKTISQIVISFNRMTC-VVLP 145


>AF039719-8|AAO12411.1|  338|Caenorhabditis elegans Mutator protein
           2, isoform b protein.
          Length = 338

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = -1

Query: 148 FNIV*TYSTIAGIANRSSDSVDITMY 71
           FNIV T ST+ G+A ++SD +D+ ++
Sbjct: 87  FNIVPTGSTVTGLATKNSD-LDVAIH 111


>AF039719-7|AAB96748.1|  441|Caenorhabditis elegans Mutator protein
           2, isoform a protein.
          Length = 441

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = -1

Query: 148 FNIV*TYSTIAGIANRSSDSVDITMY 71
           FNIV T ST+ G+A ++SD +D+ ++
Sbjct: 87  FNIVPTGSTVTGLATKNSD-LDVAIH 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,968,952
Number of Sequences: 27780
Number of extensions: 252012
Number of successful extensions: 668
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)