Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N21
         (553 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g55320.1 68418.m06894 membrane bound O-acyl transferase (MBOA...    29   1.6  
At4g37580.1 68417.m05319 N-acetyltransferase, putative / hookles...    29   2.1  
At2g19400.1 68415.m02263 protein kinase, putative contains prote...    28   3.6  
At5g47360.1 68418.m05837 pentatricopeptide (PPR) repeat-containi...    27   6.3  
At1g29150.1 68414.m03567 26S proteasome regulatory subunit, puta...    27   6.3  
At5g24270.1 68418.m02855 calcineurin B-like protein, putative / ...    27   8.3  

>At5g55320.1 68418.m06894 membrane bound O-acyl transferase (MBOAT)
           family protein / wax synthase-related similar to  wax
           synthase [Simmondsia chinensis] GI:5020219 [EC 2.3.1.75]
          Length = 339

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +3

Query: 312 RLQTIYNQCVCFILLWL*LRFVRYVLPT*FFFSEISNSR 428
           RL +I+  CV  ++L L   F  +   T FF S I+NSR
Sbjct: 35  RLLSIFPVCVLLVVLPLFFSFSIFTSTTAFFLSAIANSR 73


>At4g37580.1 68417.m05319 N-acetyltransferase, putative / hookless1
           (HLS1) contains Pfam profile PF00583: acetyltransferase,
           GNAT family; identical to cDNA putative
           N-acetyltransferase hookless1 (HLS1) GI:1277089
          Length = 403

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +2

Query: 86  DRIGRPICYPRNGTVCLYNIKEDPCETKELSSLYPDLVKNMT--DRLDLEKLKTIPRIIP 259
           D +G PIC  R+    L  + E   E KE+  +    +K +T   +LDL        + P
Sbjct: 36  DLLGDPICRIRHSPSYLMLVAEMGTEKKEIVGMIRGCIKTVTCGQKLDLNHKSQNDVVKP 95

Query: 260 LY 265
           LY
Sbjct: 96  LY 97


>At2g19400.1 68415.m02263 protein kinase, putative contains protein
           kinase domain, Pfam:PF00069
          Length = 527

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 17  NVSKPFNLENINLRNDIRVHCNIDRIGR 100
           NV++P N ENIN   D   +C+I R GR
Sbjct: 262 NVNEPLNDENINESIDGDENCSIGRRGR 289


>At5g47360.1 68418.m05837 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 477

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +2

Query: 83  IDRIGRPICYPRNGTVC--LYNIKEDPCETKELSSLYPDLVK 202
           +DR+G   C P   T C  +  + E+  + K LS L   LVK
Sbjct: 297 LDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVK 338


>At1g29150.1 68414.m03567 26S proteasome regulatory subunit,
           putative (RPN6) similar to 19S proteosome subunit 9
           GB:AAC34120 GI:3450889 from [Arabidopsis thaliana]
          Length = 419

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 134 LYNIKEDPCETKELSSLYPDLVKNMTDRLDLEK 232
           LY + EDP  + E   +    + N+ DRL  EK
Sbjct: 26  LYQVLEDPSSSPEAIRIKEQAITNLCDRLTEEK 58


>At5g24270.1 68418.m02855 calcineurin B-like protein, putative /
           calcium sensor homolog (SOS3) identical to calcium
           sensor homolog [Arabidopsis thaliana] GI:3309575;
           similar to calcineurin B-like protein 8 (GI:15866276)
           [Arabidopsis thaliana]
          Length = 222

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = +2

Query: 146 KEDPCETKELSSLYPDLVKNMTDRLDLEKLKTIPRIIPLY 265
           K D  E K+  SL P L+KNMT    L  LK I R  P +
Sbjct: 171 KIDIDEWKDFVSLNPSLIKNMT----LPYLKDINRTFPSF 206


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,914,320
Number of Sequences: 28952
Number of extensions: 218886
Number of successful extensions: 471
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)