Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_N20
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC013425-1|AAH13425.2| 318|Homo sapiens ubiquitin-like domain c... 132 8e-31
AY444562-1|AAS68538.1| 318|Homo sapiens CTD-like phosphatase do... 132 8e-31
AK057996-1|BAB71628.1| 318|Homo sapiens protein ( Homo sapiens ... 132 8e-31
BC058929-1|AAH58929.1| 174|Homo sapiens ubiquitin-like 4B protein. 31 2.0
AK098556-1|BAC05331.1| 174|Homo sapiens protein ( Homo sapiens ... 31 2.0
L44140-7|AAA92650.1| 157|Homo sapiens protein ( , complete cds'... 31 3.5
J03589-1|AAA36790.1| 157|Homo sapiens protein ( Human ubiquitin... 31 3.5
BX664739-2|CAI43235.1| 157|Homo sapiens ubiquitin-like 4 protein. 31 3.5
BX664739-1|CAI43234.1| 180|Homo sapiens ubiquitin-like 4 protein. 31 3.5
BC053589-1|AAH53589.1| 157|Homo sapiens ubiquitin-like 4A protein. 31 3.5
BC043346-1|AAH43346.1| 157|Homo sapiens ubiquitin-like 4A protein. 31 3.5
>BC013425-1|AAH13425.2| 318|Homo sapiens ubiquitin-like domain
containing CTD phosphatase 1 protein.
Length = 318
Score = 132 bits (319), Expect = 8e-31
Identities = 57/75 (76%), Positives = 67/75 (89%)
Frame = +1
Query: 322 KINKRVRDYQINLLNQPRPGKKLLVLDIDYTLFDHRSVAETGYELMRPFLHEFLTSAYVD 501
KI++RV++Y++ +LN PR GKKLLVLD+DYTLFDHRS AETG ELMRP+LHEFLTSAY D
Sbjct: 117 KISRRVKEYKVEILNPPREGKKLLVLDVDYTLFDHRSCAETGVELMRPYLHEFLTSAYED 176
Query: 502 YDLVIWSATGMTWIE 546
YD+VIWSAT M WIE
Sbjct: 177 YDIVIWSATNMKWIE 191
Score = 74.5 bits (175), Expect = 2e-13
Identities = 37/79 (46%), Positives = 50/79 (63%)
Frame = +2
Query: 5 GKEYDIPEFSPSDSVAMLKIAIENATGVRPERQKLLNIKFQGKVATDNCTLSDLNLKPNL 184
G+EY + S D+V LK ++ TGV PERQKLL +K +GK A ++ L L LKPN
Sbjct: 11 GQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAENDVKLGALKLKPNT 70
Query: 185 KIMMMGSLEEAIQGAQTKP 241
KIMMMG+ EE+++ P
Sbjct: 71 KIMMMGTREESLEDVLGPP 89
>AY444562-1|AAS68538.1| 318|Homo sapiens CTD-like phosphatase
domain-containing protein protein.
Length = 318
Score = 132 bits (319), Expect = 8e-31
Identities = 57/75 (76%), Positives = 67/75 (89%)
Frame = +1
Query: 322 KINKRVRDYQINLLNQPRPGKKLLVLDIDYTLFDHRSVAETGYELMRPFLHEFLTSAYVD 501
KI++RV++Y++ +LN PR GKKLLVLD+DYTLFDHRS AETG ELMRP+LHEFLTSAY D
Sbjct: 117 KISRRVKEYKVEILNPPREGKKLLVLDVDYTLFDHRSCAETGVELMRPYLHEFLTSAYED 176
Query: 502 YDLVIWSATGMTWIE 546
YD+VIWSAT M WIE
Sbjct: 177 YDIVIWSATNMKWIE 191
Score = 74.5 bits (175), Expect = 2e-13
Identities = 37/79 (46%), Positives = 50/79 (63%)
Frame = +2
Query: 5 GKEYDIPEFSPSDSVAMLKIAIENATGVRPERQKLLNIKFQGKVATDNCTLSDLNLKPNL 184
G+EY + S D+V LK ++ TGV PERQKLL +K +GK A ++ L L LKPN
Sbjct: 11 GQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAENDVKLGALKLKPNT 70
Query: 185 KIMMMGSLEEAIQGAQTKP 241
KIMMMG+ EE+++ P
Sbjct: 71 KIMMMGTREESLEDVLGPP 89
>AK057996-1|BAB71628.1| 318|Homo sapiens protein ( Homo sapiens
cDNA FLJ25267 fis, clone STM05473. ).
Length = 318
Score = 132 bits (319), Expect = 8e-31
Identities = 57/75 (76%), Positives = 67/75 (89%)
Frame = +1
Query: 322 KINKRVRDYQINLLNQPRPGKKLLVLDIDYTLFDHRSVAETGYELMRPFLHEFLTSAYVD 501
KI++RV++Y++ +LN PR GKKLLVLD+DYTLFDHRS AETG ELMRP+LHEFLTSAY D
Sbjct: 117 KISRRVKEYKVEILNPPREGKKLLVLDVDYTLFDHRSCAETGVELMRPYLHEFLTSAYED 176
Query: 502 YDLVIWSATGMTWIE 546
YD+VIWSAT M WIE
Sbjct: 177 YDIVIWSATNMKWIE 191
Score = 73.3 bits (172), Expect = 5e-13
Identities = 36/72 (50%), Positives = 48/72 (66%)
Frame = +2
Query: 5 GKEYDIPEFSPSDSVAMLKIAIENATGVRPERQKLLNIKFQGKVATDNCTLSDLNLKPNL 184
G+EY + S D+V LK ++ TGV PERQKLL +K +GK A ++ L L LKPN
Sbjct: 11 GQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAENDVKLGALKLKPNT 70
Query: 185 KIMMMGSLEEAI 220
KIMMMG+ EE++
Sbjct: 71 KIMMMGTREESL 82
>BC058929-1|AAH58929.1| 174|Homo sapiens ubiquitin-like 4B protein.
Length = 174
Score = 31.5 bits (68), Expect = 2.0
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Frame = +2
Query: 32 SPSDSVAMLKIAIENATGVRPERQKLLNIKFQGKVATDNCTLSDLNLKPNLKI-MMMGSL 208
S +SVA LK + V E+Q LL F+G++ D+ LSD + PN I ++M L
Sbjct: 18 SGQESVATLKRLVSRRLKVPEEQQHLL---FRGQLLEDDKHLSDYCIGPNASINVIMQPL 74
Query: 209 EE-AIQGA---QTKP 241
E+ A++ A QT+P
Sbjct: 75 EKMALKEAHQPQTQP 89
>AK098556-1|BAC05331.1| 174|Homo sapiens protein ( Homo sapiens
cDNA FLJ25690 fis, clone TST04424. ).
Length = 174
Score = 31.5 bits (68), Expect = 2.0
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Frame = +2
Query: 32 SPSDSVAMLKIAIENATGVRPERQKLLNIKFQGKVATDNCTLSDLNLKPNLKI-MMMGSL 208
S +SVA LK + V E+Q LL F+G++ D+ LSD + PN I ++M L
Sbjct: 18 SGQESVATLKRLVSRRLKVPEEQQHLL---FRGQLLEDDKHLSDYCIGPNASINVIMQPL 74
Query: 209 EE-AIQGA---QTKP 241
E+ A++ A QT+P
Sbjct: 75 EKMALKEAHQPQTQP 89
>L44140-7|AAA92650.1| 157|Homo sapiens protein ( , complete cds's.
).).
Length = 157
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 35 PSDS-VAMLKIAIENATGVRPERQKLLNIKFQGKVATDNCTLSDLNLKPNLKI-MMMGSL 208
P D V+ LK + V +Q+LL F+GK D LSD ++ PN K+ +++ L
Sbjct: 18 PEDELVSTLKQLVSEKLNVPVRQQRLL---FKGKALADGKRLSDYSIGPNSKLNLVVKPL 74
Query: 209 EEAI 220
E+ +
Sbjct: 75 EKVL 78
>J03589-1|AAA36790.1| 157|Homo sapiens protein ( Human
ubiquitin-like protein (GdX) gene, complete cds. ).
Length = 157
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 35 PSDS-VAMLKIAIENATGVRPERQKLLNIKFQGKVATDNCTLSDLNLKPNLKI-MMMGSL 208
P D V+ LK + V +Q+LL F+GK D LSD ++ PN K+ +++ L
Sbjct: 18 PEDELVSTLKQLVSEKLNVPVRQQRLL---FKGKALADGKRLSDYSIGPNSKLNLVVKPL 74
Query: 209 EEAI 220
E+ +
Sbjct: 75 EKVL 78
>BX664739-2|CAI43235.1| 157|Homo sapiens ubiquitin-like 4 protein.
Length = 157
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 35 PSDS-VAMLKIAIENATGVRPERQKLLNIKFQGKVATDNCTLSDLNLKPNLKI-MMMGSL 208
P D V+ LK + V +Q+LL F+GK D LSD ++ PN K+ +++ L
Sbjct: 18 PEDELVSTLKQLVSEKLNVPVRQQRLL---FKGKALADGKRLSDYSIGPNSKLNLVVKPL 74
Query: 209 EEAI 220
E+ +
Sbjct: 75 EKVL 78
>BX664739-1|CAI43234.1| 180|Homo sapiens ubiquitin-like 4 protein.
Length = 180
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 35 PSDS-VAMLKIAIENATGVRPERQKLLNIKFQGKVATDNCTLSDLNLKPNLKI-MMMGSL 208
P D V+ LK + V +Q+LL F+GK D LSD ++ PN K+ +++ L
Sbjct: 18 PEDELVSTLKQLVSEKLNVPVRQQRLL---FKGKALADGKRLSDYSIGPNSKLNLVVKPL 74
Query: 209 EEAI 220
E+ +
Sbjct: 75 EKVL 78
>BC053589-1|AAH53589.1| 157|Homo sapiens ubiquitin-like 4A protein.
Length = 157
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 35 PSDS-VAMLKIAIENATGVRPERQKLLNIKFQGKVATDNCTLSDLNLKPNLKI-MMMGSL 208
P D V+ LK + V +Q+LL F+GK D LSD ++ PN K+ +++ L
Sbjct: 18 PEDELVSTLKQLVSEKLNVPVRQQRLL---FKGKALADGKRLSDYSIGPNSKLNLVVKPL 74
Query: 209 EEAI 220
E+ +
Sbjct: 75 EKVL 78
>BC043346-1|AAH43346.1| 157|Homo sapiens ubiquitin-like 4A protein.
Length = 157
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 35 PSDS-VAMLKIAIENATGVRPERQKLLNIKFQGKVATDNCTLSDLNLKPNLKI-MMMGSL 208
P D V+ LK + V +Q+LL F+GK D LSD ++ PN K+ +++ L
Sbjct: 18 PEDELVSTLKQLVSEKLNVPVRQQRLL---FKGKALADGKRLSDYSIGPNSKLNLVVKPL 74
Query: 209 EEAI 220
E+ +
Sbjct: 75 EKVL 78
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,269,786
Number of Sequences: 237096
Number of extensions: 1104652
Number of successful extensions: 2344
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2344
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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