Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_N17
(348 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50199-3|AAA91263.1| 555|Caenorhabditis elegans Hypothetical pr... 79 7e-16
AM748820-1|CAO72174.1| 555|Caenorhabditis elegans hexosaminidas... 79 7e-16
U28730-2|AAA68262.1| 1009|Caenorhabditis elegans Hypothetical pr... 27 2.8
Z81497-7|CAB04083.3| 652|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z75955-17|CAB00127.3| 652|Caenorhabditis elegans Hypothetical p... 27 4.9
Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr... 26 6.4
Z77662-4|CAB01193.1| 248|Caenorhabditis elegans Hypothetical pr... 26 6.4
Z68751-7|CAA92977.2| 319|Caenorhabditis elegans Hypothetical pr... 26 6.4
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 26 8.5
AY714241-1|AAV68307.1| 529|Caenorhabditis elegans SPD-1 protein. 26 8.5
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 26 8.5
AC024756-3|AAT81176.1| 529|Caenorhabditis elegans Spindle defec... 26 8.5
>U50199-3|AAA91263.1| 555|Caenorhabditis elegans Hypothetical
protein T14F9.3 protein.
Length = 555
Score = 79.4 bits (187), Expect = 7e-16
Identities = 32/55 (58%), Positives = 44/55 (80%)
Frame = +3
Query: 3 DTSRHYLSLSKILKNIDAMAANKMNVLHWHIVDDQSFPYHSEKFPELSRLGAYHP 167
D+SRH+LS++ I + ++ M+ NK+NVLHWH+VD +SFPY S KFPEL +GAY P
Sbjct: 178 DSSRHFLSVNVIKRQLEIMSMNKLNVLHWHLVDSESFPYTSVKFPELHGVGAYSP 232
Score = 53.2 bits (122), Expect = 5e-08
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +2
Query: 176 YTKRDIEIVVKHAAERGVRVLPEFDVPGHTSSWGVAFPSILTKCYN 313
Y++ DI V+ A RG+RV+PEFD+PGHTSSW LT+C++
Sbjct: 236 YSREDIADVIAFARLRGIRVIPEFDLPGHTSSWR-GRKGFLTECFD 280
>AM748820-1|CAO72174.1| 555|Caenorhabditis elegans hexosaminidase
protein.
Length = 555
Score = 79.4 bits (187), Expect = 7e-16
Identities = 32/55 (58%), Positives = 44/55 (80%)
Frame = +3
Query: 3 DTSRHYLSLSKILKNIDAMAANKMNVLHWHIVDDQSFPYHSEKFPELSRLGAYHP 167
D+SRH+LS++ I + ++ M+ NK+NVLHWH+VD +SFPY S KFPEL +GAY P
Sbjct: 178 DSSRHFLSVNVIKRQLEIMSMNKLNVLHWHLVDSESFPYTSVKFPELHGVGAYSP 232
Score = 53.2 bits (122), Expect = 5e-08
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +2
Query: 176 YTKRDIEIVVKHAAERGVRVLPEFDVPGHTSSWGVAFPSILTKCYN 313
Y++ DI V+ A RG+RV+PEFD+PGHTSSW LT+C++
Sbjct: 236 YSREDIADVIAFARLRGIRVIPEFDLPGHTSSWR-GRKGFLTECFD 280
>U28730-2|AAA68262.1| 1009|Caenorhabditis elegans Hypothetical
protein K10B2.5 protein.
Length = 1009
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +3
Query: 9 SRHYLSLSKILKNIDAMAANKMNVLHWHIVDDQSFPYHSEKFPELSRLGA--YHPH 170
S Y +L + +N + M N+ V+ + +DD H E LG Y PH
Sbjct: 96 SPRYANLGRYRRNSEPMQDNEKEVVTTNFIDDSMIEDHEEYEEHDIELGTDFYDPH 151
>Z81497-7|CAB04083.3| 652|Caenorhabditis elegans Hypothetical
protein R07B7.2 protein.
Length = 652
Score = 26.6 bits (56), Expect = 4.9
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 139 N*VDSELIIHISVHQTRYRDCSETRR*ERGSSLTRV*CTRSHEFMGSSFPQHPN 300
N DS+ H +HQT R+ ET S ++V S E M S FP+ N
Sbjct: 204 NDADSQSFFHSRLHQTEQRE--ETNSNSMQSIHSQVNPPASQETMESHFPEMIN 255
>Z75955-17|CAB00127.3| 652|Caenorhabditis elegans Hypothetical
protein R07B7.2 protein.
Length = 652
Score = 26.6 bits (56), Expect = 4.9
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 139 N*VDSELIIHISVHQTRYRDCSETRR*ERGSSLTRV*CTRSHEFMGSSFPQHPN 300
N DS+ H +HQT R+ ET S ++V S E M S FP+ N
Sbjct: 204 NDADSQSFFHSRLHQTEQRE--ETNSNSMQSIHSQVNPPASQETMESHFPEMIN 255
>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical protein
F16B12.6 protein.
Length = 1392
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 195 SISRLVYTNVDDKLRVDLVRETFHCDKENSDHRRYANGV 79
S+ RL+Y + +L + ++ ETFH D + D GV
Sbjct: 1305 SLFRLLYEKNEQRL-LQMINETFHVDIFSGDQEIVEEGV 1342
>Z77662-4|CAB01193.1| 248|Caenorhabditis elegans Hypothetical
protein F47B8.4 protein.
Length = 248
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -1
Query: 171 NVDDKLRVDLVRETFHCDKENS---DHRRYANGVRSFY 67
N+ +KL + RETF ++EN D+ R +G Y
Sbjct: 125 NIPEKLEIKTQRETFQLEEENEIRMDNCRMMSGQAKIY 162
>Z68751-7|CAA92977.2| 319|Caenorhabditis elegans Hypothetical
protein T05E11.6 protein.
Length = 319
Score = 26.2 bits (55), Expect = 6.4
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 245 FDVPGHTSSWGV 280
FD PGHT++W V
Sbjct: 30 FDTPGHTNNWAV 41
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 156 LRVDLVRETFHCDKENSDHRRYANGVRSFY 67
+ VDL RE D N +HR+ A R +Y
Sbjct: 1317 MSVDLAREILSVDLTNEEHRKPAFIRRQYY 1346
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 156 LRVDLVRETFHCDKENSDHRRYANGVRSFY 67
+ VDL RE D N +HR+ A R +Y
Sbjct: 1317 MSVDLAREILSVDLTNEEHRKPAFIRRQYY 1346
>AY714241-1|AAV68307.1| 529|Caenorhabditis elegans SPD-1 protein.
Length = 529
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 258 PGTSNSGKTRTPLSAACFTTISIS 187
P TS+S +T TP+S T SI+
Sbjct: 488 PSTSSSSRTTTPMSKRAMTPSSIA 511
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 156 LRVDLVRETFHCDKENSDHRRYANGVRSFY 67
+ VDL RE D N +HR+ A R +Y
Sbjct: 1317 MSVDLAREILSVDLTNEEHRKPAFIRRQYY 1346
>AC024756-3|AAT81176.1| 529|Caenorhabditis elegans Spindle
defective protein 1 protein.
Length = 529
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 258 PGTSNSGKTRTPLSAACFTTISIS 187
P TS+S +T TP+S T SI+
Sbjct: 488 PSTSSSSRTTTPMSKRAMTPSSIA 511
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,034,451
Number of Sequences: 27780
Number of extensions: 156780
Number of successful extensions: 380
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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