Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_N17
(348 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 26 0.11
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 23 1.4
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 21 4.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 5.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 5.5
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 20 7.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 20 7.3
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 7.3
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 7.3
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 20 7.3
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 20 7.3
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 20 9.6
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 20 9.6
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 20 9.6
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 20 9.6
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 20 9.6
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 26.2 bits (55), Expect = 0.11
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 131 LFTVIRKTLIIDDMPMEYVHFIRGH 57
LFT + + I + MPME + +R H
Sbjct: 322 LFTTVHRICIGETMPMELIENLRNH 346
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 22.6 bits (46), Expect = 1.4
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +3
Query: 9 SRHYLSLSKILKNIDAMAANKMNVLHWHIVDDQSFPYHSEKFPELSRLGAYHPH 170
S H + LS ++ D + LH H V Q PY + P+ + HP+
Sbjct: 52 STHLMDLSSPPEHRDLPIYQSHHHLHHHQVLYQQSPYLMYENPDEEKRYQEHPN 105
Score = 20.2 bits (40), Expect = 7.3
Identities = 5/16 (31%), Positives = 11/16 (68%)
Frame = -1
Query: 150 VDLVRETFHCDKENSD 103
+D + + HC+ EN++
Sbjct: 301 IDFLFQVLHCNMENTE 316
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 21.0 bits (42), Expect = 4.2
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 299 LGCWGKLLP 273
+GCW LLP
Sbjct: 338 VGCWNSLLP 346
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 5.5
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = +2
Query: 5 HIQALFIVIEDTKEYRC 55
H+ +++ED EY C
Sbjct: 483 HVNISHVMVEDGGEYSC 499
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 5.5
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = +2
Query: 5 HIQALFIVIEDTKEYRC 55
H+ +++ED EY C
Sbjct: 483 HVNISHVMVEDGGEYSC 499
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 20.2 bits (40), Expect = 7.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 227 VRVLPEFDVPGH 262
VRVLP F GH
Sbjct: 229 VRVLPNFPSSGH 240
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 20.2 bits (40), Expect = 7.3
Identities = 8/35 (22%), Positives = 14/35 (40%)
Frame = +1
Query: 10 PGTIXXXXXXXXISMPWPRIK*TYSIGISSMIRVF 114
PG I + W + IG+++M+ F
Sbjct: 310 PGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFF 344
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 20.2 bits (40), Expect = 7.3
Identities = 8/35 (22%), Positives = 14/35 (40%)
Frame = +1
Query: 10 PGTIXXXXXXXXISMPWPRIK*TYSIGISSMIRVF 114
PG I + W + IG+++M+ F
Sbjct: 279 PGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFF 313
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 20.2 bits (40), Expect = 7.3
Identities = 8/35 (22%), Positives = 14/35 (40%)
Frame = +1
Query: 10 PGTIXXXXXXXXISMPWPRIK*TYSIGISSMIRVF 114
PG I + W + IG+++M+ F
Sbjct: 330 PGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFF 364
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 20.2 bits (40), Expect = 7.3
Identities = 8/35 (22%), Positives = 14/35 (40%)
Frame = +1
Query: 10 PGTIXXXXXXXXISMPWPRIK*TYSIGISSMIRVF 114
PG I + W + IG+++M+ F
Sbjct: 279 PGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFF 313
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 20.2 bits (40), Expect = 7.3
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +1
Query: 148 DSELIIHISVHQT 186
D+EL++HIS +++
Sbjct: 112 DNELLVHISTNKS 124
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 19.8 bits (39), Expect = 9.6
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -2
Query: 317 HRCNILLGCW 288
HRC I G W
Sbjct: 181 HRCRINFGSW 190
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 19.8 bits (39), Expect = 9.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 200 QSLYRVWCTLMWMIS 156
QSL +W T++ MIS
Sbjct: 348 QSLTDMWLTMLSMIS 362
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 19.8 bits (39), Expect = 9.6
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 108 SFPYHSEKFPEL 143
++ YH EKF +L
Sbjct: 7 NYSYHDEKFKQL 18
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 19.8 bits (39), Expect = 9.6
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 108 SFPYHSEKFPEL 143
++ YH EKF +L
Sbjct: 7 NYSYHDEKFKQL 18
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 19.8 bits (39), Expect = 9.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 200 QSLYRVWCTLMWMIS 156
QSL +W T++ MIS
Sbjct: 316 QSLTDMWLTMLSMIS 330
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,789
Number of Sequences: 438
Number of extensions: 1835
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 7936320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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