Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_N16
(604 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 249 5e-66
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 249 5e-66
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 249 5e-66
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 249 5e-66
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 249 5e-66
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 249 5e-66
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 249 5e-66
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 249 5e-66
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 249 5e-66
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 249 5e-66
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 249 5e-66
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 249 5e-66
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 244 1e-64
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 241 1e-63
AK075043-1|BAC11370.1| 265|Homo sapiens protein ( Homo sapiens ... 36 0.11
AY367050-1|AAR15506.1| 550|Homo sapiens NOEL1C protein. 30 5.4
AY280969-1|AAQ18787.1| 504|Homo sapiens no Rab11-binding protei... 30 5.4
AY280968-1|AAQ18786.1| 1283|Homo sapiens Rab11-family interactin... 30 5.4
AY280967-1|AAQ18785.1| 504|Homo sapiens no Rab11-binding protei... 30 5.4
AY280966-1|AAQ18784.1| 612|Homo sapiens Rab11-family interactin... 30 5.4
AK122583-1|BAC56924.1| 681|Homo sapiens FLJ00294 protein protein. 30 5.4
AK090437-1|BAC03418.1| 469|Homo sapiens FLJ00355 protein protein. 30 5.4
AF243129-1|AAK61830.1| 3494|Homo sapiens intrinsic factor-vitami... 29 9.5
AF034611-1|AAC82612.1| 3623|Homo sapiens intrinsic factor-B12 re... 29 9.5
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 249 bits (610), Expect = 5e-66
Identities = 111/198 (56%), Positives = 147/198 (74%)
Frame = +3
Query: 3 RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
RVN Q+R S +PALV ++GH +E++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 114 RVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXX 362
+KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFRNIPGI +
Sbjct: 174 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVS 233
Query: 363 XXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLPQPKMANTDLSRLL 542
APGGH+GRF IWT+SAF +LD L+G+W+ ++ K +NLP KM NTDLSR+L
Sbjct: 234 KLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRIL 293
Query: 543 KSEEIRKVLRAPNKRVVR 596
KS EI++ LRAP K++ R
Sbjct: 294 KSPEIQRALRAPRKKIHR 311
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 249 bits (610), Expect = 5e-66
Identities = 111/198 (56%), Positives = 147/198 (74%)
Frame = +3
Query: 3 RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
RVN Q+R S +PALV ++GH +E++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 114 RVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXX 362
+KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFRNIPGI +
Sbjct: 174 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVS 233
Query: 363 XXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLPQPKMANTDLSRLL 542
APGGH+GRF IWT+SAF +LD L+G+W+ ++ K +NLP KM NTDLSR+L
Sbjct: 234 KLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRIL 293
Query: 543 KSEEIRKVLRAPNKRVVR 596
KS EI++ LRAP K++ R
Sbjct: 294 KSPEIQRALRAPRKKIHR 311
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 249 bits (610), Expect = 5e-66
Identities = 111/198 (56%), Positives = 147/198 (74%)
Frame = +3
Query: 3 RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
RVN Q+R S +PALV ++GH +E++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 114 RVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXX 362
+KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFRNIPGI +
Sbjct: 174 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVS 233
Query: 363 XXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLPQPKMANTDLSRLL 542
APGGH+GRF IWT+SAF +LD L+G+W+ ++ K +NLP KM NTDLSR+L
Sbjct: 234 KLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRIL 293
Query: 543 KSEEIRKVLRAPNKRVVR 596
KS EI++ LRAP K++ R
Sbjct: 294 KSPEIQRALRAPRKKIHR 311
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 249 bits (610), Expect = 5e-66
Identities = 111/198 (56%), Positives = 147/198 (74%)
Frame = +3
Query: 3 RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
RVN Q+R S +PALV ++GH +E++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 114 RVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXX 362
+KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFRNIPGI +
Sbjct: 174 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVS 233
Query: 363 XXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLPQPKMANTDLSRLL 542
APGGH+GRF IWT+SAF +LD L+G+W+ ++ K +NLP KM NTDLSR+L
Sbjct: 234 KLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRIL 293
Query: 543 KSEEIRKVLRAPNKRVVR 596
KS EI++ LRAP K++ R
Sbjct: 294 KSPEIQRALRAPRKKIHR 311
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 249 bits (610), Expect = 5e-66
Identities = 111/198 (56%), Positives = 147/198 (74%)
Frame = +3
Query: 3 RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
RVN Q+R S +PALV ++GH +E++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 114 RVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXX 362
+KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFRNIPGI +
Sbjct: 174 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVS 233
Query: 363 XXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLPQPKMANTDLSRLL 542
APGGH+GRF IWT+SAF +LD L+G+W+ ++ K +NLP KM NTDLSR+L
Sbjct: 234 KLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRIL 293
Query: 543 KSEEIRKVLRAPNKRVVR 596
KS EI++ LRAP K++ R
Sbjct: 294 KSPEIQRALRAPRKKIHR 311
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 249 bits (610), Expect = 5e-66
Identities = 111/198 (56%), Positives = 147/198 (74%)
Frame = +3
Query: 3 RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
RVN Q+R S +PALV ++GH +E++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 114 RVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXX 362
+KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFRNIPGI +
Sbjct: 174 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVS 233
Query: 363 XXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLPQPKMANTDLSRLL 542
APGGH+GRF IWT+SAF +LD L+G+W+ ++ K +NLP KM NTDLSR+L
Sbjct: 234 KLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRIL 293
Query: 543 KSEEIRKVLRAPNKRVVR 596
KS EI++ LRAP K++ R
Sbjct: 294 KSPEIQRALRAPRKKIHR 311
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 249 bits (610), Expect = 5e-66
Identities = 111/198 (56%), Positives = 147/198 (74%)
Frame = +3
Query: 3 RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
RVN Q+R S +PALV ++GH +E++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 114 RVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXX 362
+KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFRNIPGI +
Sbjct: 174 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVS 233
Query: 363 XXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLPQPKMANTDLSRLL 542
APGGH+GRF IWT+SAF +LD L+G+W+ ++ K +NLP KM NTDLSR+L
Sbjct: 234 KLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRIL 293
Query: 543 KSEEIRKVLRAPNKRVVR 596
KS EI++ LRAP K++ R
Sbjct: 294 KSPEIQRALRAPRKKIHR 311
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 249 bits (610), Expect = 5e-66
Identities = 111/198 (56%), Positives = 147/198 (74%)
Frame = +3
Query: 3 RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
RVN Q+R S +PALV ++GH +E++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 114 RVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXX 362
+KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFRNIPGI +
Sbjct: 174 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVS 233
Query: 363 XXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLPQPKMANTDLSRLL 542
APGGH+GRF IWT+SAF +LD L+G+W+ ++ K +NLP KM NTDLSR+L
Sbjct: 234 KLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRIL 293
Query: 543 KSEEIRKVLRAPNKRVVR 596
KS EI++ LRAP K++ R
Sbjct: 294 KSPEIQRALRAPRKKIHR 311
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 249 bits (610), Expect = 5e-66
Identities = 111/198 (56%), Positives = 147/198 (74%)
Frame = +3
Query: 3 RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
RVN Q+R S +PALV ++GH +E++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 114 RVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXX 362
+KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFRNIPGI +
Sbjct: 174 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVS 233
Query: 363 XXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLPQPKMANTDLSRLL 542
APGGH+GRF IWT+SAF +LD L+G+W+ ++ K +NLP KM NTDLSR+L
Sbjct: 234 KLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRIL 293
Query: 543 KSEEIRKVLRAPNKRVVR 596
KS EI++ LRAP K++ R
Sbjct: 294 KSPEIQRALRAPRKKIHR 311
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 249 bits (610), Expect = 5e-66
Identities = 111/198 (56%), Positives = 147/198 (74%)
Frame = +3
Query: 3 RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
RVN Q+R S +PALV ++GH +E++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 114 RVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXX 362
+KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFRNIPGI +
Sbjct: 174 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVS 233
Query: 363 XXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLPQPKMANTDLSRLL 542
APGGH+GRF IWT+SAF +LD L+G+W+ ++ K +NLP KM NTDLSR+L
Sbjct: 234 KLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRIL 293
Query: 543 KSEEIRKVLRAPNKRVVR 596
KS EI++ LRAP K++ R
Sbjct: 294 KSPEIQRALRAPRKKIHR 311
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 249 bits (610), Expect = 5e-66
Identities = 111/198 (56%), Positives = 147/198 (74%)
Frame = +3
Query: 3 RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
RVN Q+R S +PALV ++GH +E++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 128 RVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 187
Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXX 362
+KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFRNIPGI +
Sbjct: 188 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVS 247
Query: 363 XXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLPQPKMANTDLSRLL 542
APGGH+GRF IWT+SAF +LD L+G+W+ ++ K +NLP KM NTDLSR+L
Sbjct: 248 KLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRIL 307
Query: 543 KSEEIRKVLRAPNKRVVR 596
KS EI++ LRAP K++ R
Sbjct: 308 KSPEIQRALRAPRKKIHR 325
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 249 bits (610), Expect = 5e-66
Identities = 111/198 (56%), Positives = 147/198 (74%)
Frame = +3
Query: 3 RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
RVN Q+R S +PALV ++GH +E++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 114 RVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXX 362
+KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFRNIPGI +
Sbjct: 174 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVS 233
Query: 363 XXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLPQPKMANTDLSRLL 542
APGGH+GRF IWT+SAF +LD L+G+W+ ++ K +NLP KM NTDLSR+L
Sbjct: 234 KLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRIL 293
Query: 543 KSEEIRKVLRAPNKRVVR 596
KS EI++ LRAP K++ R
Sbjct: 294 KSPEIQRALRAPRKKIHR 311
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 244 bits (598), Expect = 1e-64
Identities = 109/198 (55%), Positives = 145/198 (73%)
Frame = +3
Query: 3 RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
RVN Q+R S +PALV +GH +E++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 114 RVNTTQKRYAICSALAASALPALVMPKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXX 362
+KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFRNIPGI +
Sbjct: 174 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVS 233
Query: 363 XXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLPQPKMANTDLSRLL 542
APGGH+GRF IW +SAF +LD L+G+W+ ++ K +NLP +M NTDLSR+L
Sbjct: 234 KLNILKLAPGGHVGRFCIWIESAFRKLDELYGTWRKAASLKSNYNLPMHEMINTDLSRIL 293
Query: 543 KSEEIRKVLRAPNKRVVR 596
KS EI++ LRAP K++ R
Sbjct: 294 KSPEIQRALRAPRKKIHR 311
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 241 bits (591), Expect = 1e-63
Identities = 110/198 (55%), Positives = 145/198 (73%)
Frame = +3
Query: 3 RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
RVN Q+R S +PALV ++GH +E+ PELPLVV DKV+ KTK+AV+ L++
Sbjct: 114 RVNTTQKRYAICSALAASALPALVMSKGHRIEEFPELPLVVEDKVEGYKKTKEAVLLLKK 173
Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXX 362
+KAW+D+ KVY SQR+RAGKGKMRNRR +QR+GP IIYN+D G+ +AFRNIPGI +
Sbjct: 174 LKAWNDIKKVYASQRMRAGKGKMRNRR-IQRRGPCIIYNEDNGIIKAFRNIPGITLLNVS 232
Query: 363 XXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLPQPKMANTDLSRLL 542
APGGH+GRF IWT+SAF +LD L+G+W+ ++ K +NLP KM NTDLSR+L
Sbjct: 233 KLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRIL 292
Query: 543 KSEEIRKVLRAPNKRVVR 596
KS EI++ LRAP K++ R
Sbjct: 293 KSPEIQRALRAPRKKIHR 310
>AK075043-1|BAC11370.1| 265|Homo sapiens protein ( Homo sapiens
cDNA FLJ90562 fis, clone OVARC1001163. ).
Length = 265
Score = 35.9 bits (79), Expect = 0.11
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +2
Query: 308 GSDSCIPQHPWHRDAQREQAEPPEAGTRRPSRQVHHL--DQVRFR*A*PAVRLVEDTIER 481
G + HP D +REQA AG R P ++HHL D VR R PA+ L + R
Sbjct: 127 GHPGAVRGHPGGGDQRREQAGGWHAGRRLP--ELHHLRGDAVRLR--GPALCLPLPGVRR 182
Query: 482 EE-DFQPAPAEDGQH 523
EE +F P +H
Sbjct: 183 EEGEFTSPPGTHAEH 197
>AY367050-1|AAR15506.1| 550|Homo sapiens NOEL1C protein.
Length = 550
Score = 30.3 bits (65), Expect = 5.4
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 260 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 418
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 161 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 214
>AY280969-1|AAQ18787.1| 504|Homo sapiens no Rab11-binding protein
1B protein.
Length = 504
Score = 30.3 bits (65), Expect = 5.4
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 260 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 418
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 161 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 214
>AY280968-1|AAQ18786.1| 1283|Homo sapiens Rab11-family interacting
protein 1B protein.
Length = 1283
Score = 30.3 bits (65), Expect = 5.4
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 260 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 418
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 832 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 885
>AY280967-1|AAQ18785.1| 504|Homo sapiens no Rab11-binding protein
1A protein.
Length = 504
Score = 30.3 bits (65), Expect = 5.4
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 260 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 418
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 161 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 214
>AY280966-1|AAQ18784.1| 612|Homo sapiens Rab11-family interacting
protein 1A protein.
Length = 612
Score = 30.3 bits (65), Expect = 5.4
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 260 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 418
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 161 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 214
>AK122583-1|BAC56924.1| 681|Homo sapiens FLJ00294 protein protein.
Length = 681
Score = 30.3 bits (65), Expect = 5.4
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 260 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 418
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 230 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 283
>AK090437-1|BAC03418.1| 469|Homo sapiens FLJ00355 protein protein.
Length = 469
Score = 30.3 bits (65), Expect = 5.4
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 260 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 418
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 80 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 133
>AF243129-1|AAK61830.1| 3494|Homo sapiens intrinsic factor-vitamin B12
receptor protein.
Length = 3494
Score = 29.5 bits (63), Expect = 9.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 456 GSWKTPSNEKKTFNLPQPKMANTDLSRLLKSEEIRKVL 569
G ++ PS E + N P P +NTD S +++ + +VL
Sbjct: 1383 GIFQAPSGEIHSPNYPSPYRSNTDCSWVIRVDRYHRVL 1420
>AF034611-1|AAC82612.1| 3623|Homo sapiens intrinsic factor-B12
receptor precursor protein.
Length = 3623
Score = 29.5 bits (63), Expect = 9.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 456 GSWKTPSNEKKTFNLPQPKMANTDLSRLLKSEEIRKVL 569
G ++ PS E + N P P +NTD S +++ + +VL
Sbjct: 1512 GIFQAPSGEIHSPNYPSPYRSNTDCSWVIRVDRYHRVL 1549
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,902,375
Number of Sequences: 237096
Number of extensions: 1584479
Number of successful extensions: 5944
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 5458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5932
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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