Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N16
         (604 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13382-1|CAA31759.1|  407|Drosophila melanogaster protein ( Dros...   279   2e-75
AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p pro...   279   2e-75
AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA...   279   2e-75
BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p pro...   159   4e-39
X06881-1|CAA29998.1|  123|Drosophila melanogaster protein ( Dros...    91   1e-18

>X13382-1|CAA31759.1|  407|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for put. ribosomal protein
           L1. ).
          Length = 407

 Score =  279 bits (684), Expect = 2e-75
 Identities = 128/199 (64%), Positives = 158/199 (79%)
 Frame = +3

Query: 3   RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
           +VN+ QRR         SGVPALVQ++GH+++ + E PLVVSD+VQ++ KTKQAVIFLRR
Sbjct: 117 KVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRR 176

Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXX 362
           +K W+D+ KVYKSQR RAG+G MR+RRR+ R+GPL++Y+KD+GL +AFRNIPGIE     
Sbjct: 177 LKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVD 236

Query: 363 XXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLPQPKMANTDLSRLL 542
                  APGGH+GRF+IWT+SAF RL+ LFG+WK PS  KK +NLPQPKMANTDLSRLL
Sbjct: 237 KLNVLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLL 296

Query: 543 KSEEIRKVLRAPNKRVVRA 599
           KSEEIRKVLR P KRV R+
Sbjct: 297 KSEEIRKVLRDPRKRVFRS 315


>AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p
           protein.
          Length = 401

 Score =  279 bits (684), Expect = 2e-75
 Identities = 128/199 (64%), Positives = 158/199 (79%)
 Frame = +3

Query: 3   RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
           +VN+ QRR         SGVPALVQ++GH+++ + E PLVVSD+VQ++ KTKQAVIFLRR
Sbjct: 117 KVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRR 176

Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXX 362
           +K W+D+ KVYKSQR RAG+G MR+RRR+ R+GPL++Y+KD+GL +AFRNIPGIE     
Sbjct: 177 LKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVD 236

Query: 363 XXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLPQPKMANTDLSRLL 542
                  APGGH+GRF+IWT+SAF RL+ LFG+WK PS  KK +NLPQPKMANTDLSRLL
Sbjct: 237 KLNLLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLL 296

Query: 543 KSEEIRKVLRAPNKRVVRA 599
           KSEEIRKVLR P KRV R+
Sbjct: 297 KSEEIRKVLRDPRKRVFRS 315


>AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA
           protein.
          Length = 401

 Score =  279 bits (684), Expect = 2e-75
 Identities = 128/199 (64%), Positives = 158/199 (79%)
 Frame = +3

Query: 3   RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
           +VN+ QRR         SGVPALVQ++GH+++ + E PLVVSD+VQ++ KTKQAVIFLRR
Sbjct: 117 KVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRR 176

Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMXXXX 362
           +K W+D+ KVYKSQR RAG+G MR+RRR+ R+GPL++Y+KD+GL +AFRNIPGIE     
Sbjct: 177 LKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVD 236

Query: 363 XXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLPQPKMANTDLSRLL 542
                  APGGH+GRF+IWT+SAF RL+ LFG+WK PS  KK +NLPQPKMANTDLSRLL
Sbjct: 237 KLNLLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLL 296

Query: 543 KSEEIRKVLRAPNKRVVRA 599
           KSEEIRKVLR P KRV R+
Sbjct: 297 KSEEIRKVLRDPRKRVFRS 315


>BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p
           protein.
          Length = 233

 Score =  159 bits (385), Expect = 4e-39
 Identities = 69/112 (61%), Positives = 92/112 (82%)
 Frame = +3

Query: 3   RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
           +VN+ QRR         SGVPALVQ++GH+++ + E PLVVSD+VQ++ KTKQAVIFLRR
Sbjct: 117 KVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRR 176

Query: 183 IKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFRNIP 338
           +K W+D+ KVYKSQR RAG+G MR+RRR+ R+GPL++Y+KD+GL +AFRNIP
Sbjct: 177 LKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIP 228


>X06881-1|CAA29998.1|  123|Drosophila melanogaster protein (
           Drosophila gene forribosomal protein L1 fragment. ).
          Length = 123

 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 40/69 (57%), Positives = 53/69 (76%)
 Frame = +3

Query: 3   RVNLRQRRXXXXXXXXXSGVPALVQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRR 182
           RVN+ QRR         SGVPALVQ++GH+++ + E PLVVSD+VQ++ KTKQAVIFLRR
Sbjct: 55  RVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRR 114

Query: 183 IKAWSDVLK 209
           +K W+D+ K
Sbjct: 115 LKIWADIQK 123


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,017,744
Number of Sequences: 53049
Number of extensions: 484292
Number of successful extensions: 2350
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2349
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)