Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N16
         (604 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    27   0.19 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   1.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.0  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   4.0  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    22   5.3  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 498 LPQPKMANTDLSRLLKSEEIRKVLRAPNKRV 590
           LP P   N  L  L+ S E+R+  +APN  V
Sbjct: 490 LPPPYRLNKPLMSLITSSEVRQPGKAPNYSV 520


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 396 HLGRFIIWTKSAFDRLDPLFGSWKTPSNEKKTFNLP 503
           H   +  WT ++ +   P  G +KT S     F+LP
Sbjct: 25  HRPAWWFWTATSHEASAPAEGKFKTVSKVPGPFSLP 60


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 452 VRLVEDTIEREEDFQPAPAEDGQHRPQPSAEVRRDPQGP 568
           V+++    ++ E+F P    DG++   PS E+     GP
Sbjct: 134 VKVLSWHTDQGEEFVPGDDYDGKYLVLPSGELHIRDVGP 172


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 376 RRFSLFTLSISMPGMLRNARVR 311
           R++++  L I +  +LRN RVR
Sbjct: 491 RKYAMLKLKIVLSTILRNFRVR 512


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +3

Query: 81  RGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRA-GKGKMRN 257
           R  +++   ++ L+VSD   E  K  ++ + + R       L VYKS+     G  K +N
Sbjct: 157 RQEVLQAFKQVQLLVSDSDVESYKQIKSDLDVLRQSVEKSELWVYKSKASEEHGNKKKKN 216

Query: 258 R 260
           +
Sbjct: 217 K 217


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,657
Number of Sequences: 438
Number of extensions: 3105
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)